Changes between Version 9 and Version 10 of WikiStart


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Timestamp:
Jun 26, 2012, 10:49:24 AM (7 years ago)
Author:
w.spee@…
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  • WikiStart

    v9 v10  
    44The Solid_XSQ_converter tool converts Solid XSQ files to BWA specific CSFastQ files. Other output formats will be added.
    55This tool is able to convert XSQ files comparatively fast by using the HDF5 Java library to process the XSQ file.
     6
     7Quality of the output has been checked by diffing the CSFastQ output from this tool to the CSFastQ output of other tools.
     8Please still compare the output of this tool to the output of your previous conversion tool to make sure the output is also correct in your environment / setup.
     9A few Linux command to do this are provided in a text document on the download page.
    610
    711Developed by Wim Spee from the Hubrecht Cuppen group.