#Sample_name	fastq_file	reference	alignment.paired_end	application	options
sample_1	/data/FC01/demultiplexed/sample_1/s_sample_1.fastq	/data/Genomes/Bowtie/hg19	0	chipseq
sample_2	/data/FC01/demultiplexed/sample_2/s_sample_2.fastq	/data/Genomes/Bowtie/hg19	0	chipseq