Welcome to project NARWHAL
NARWHAL, a primary analysis pipeline for NGS data
R.W.W. Brouwer1,2, M.C.G.N. van den Hout1, F.G. Grosveld1 and W.F.J. van IJcken1,*
1)Center for Biomics, Department of Cell biology, Erasmus Medical Center, Rotterdam, The Netherlands 2)Netherlands Bioinformatics Center (NBIC), Nijmegen, The Netherlands
- corresponding author
Summary
the NARWHAL software pipeline has been developed to automate the primary analysis of massive parallel sequencing data. NARWHAL has been specifically developed to deal with large num-bers of samples and diverse sequencing applications. NARWHAL performs de-multiplexing, alignment and quality control with a minimum of hands-on time.
Installation instructions
installation instructions are available here.
User guide
The user guide is available here.
House keeping information
Mailing lists
This project provides the following mailing lists.
- narwhal-users: a list intended for general discussion on the project.
- narwhal-commits: a list that receives source code commit messages.
- narwhal-devel: a list intended for discussion among developers (subscription is restricted to registered developers).
Availability
Distributions
Stable distributions are available from the downloads section.
Source access
Anonymous readonly subversion access works as follows:
svn co https://trac.nbic.nl/svn/narwhal narwhal
Write access is only available to registered developers.
You can become a developer by registering yourself if you haven't already done so, and requesting write access on the narwhal-users mailing list.
Starting Points
- TracGuide -- Built-in Documentation
- TitleIndex -- A complete list of local wiki pages.
- Trac FAQ -- Frequently Asked Questions
Other NBIC software projects
All active NBIC software projects can be accessed from the project index.