Changeset 62

Timestamp:

Aug 11, 2010, 4:15:11 PM (10 years ago)

Author:

j@…

bzr:base-revision:

j@dannynavarro.net-20100811131617-5n3z2dsngary27hz

bzr:committer:

Danny Navarro <j@dannynavarro.net>

bzr:file-ids:

mzcms/parsers.py parsers.py-20100806092910-g1sxvv1o5b9umkof-1

bzr:mapping-version:

v4

bzr:repository-uuid:

724254b2-fbe6-419d-9466-c04ef4c9d29d

bzr:revision-id:

j@dannynavarro.net-20100811134542-zwi05fd7d7sfa5b3

bzr:revno:

62

bzr:revprop:branch-nick:

trunk

bzr:root:

trunk

bzr:timestamp:

2010-08-11 15:45:42.236999989 +0200

bzr:user-agent:

bzr2.1.2+bzr-svn1.0.3

svn:original-date:

2010-08-11T13:45:42.237000Z

Message:

Uncommented check for presence of protein sequence

File:

• trunk/mzcms/parsers.py (modified) (1 diff)

trunk/mzcms/parsers.py

@@ -283 +283 @@
                 else:
                     sequence = ''.join(seq_lines)
-                    if prot_id in proteins:
-                        #proteins[prot_id].sequence == 'TBI':
+                    if prot_id in proteins and \
+                        proteins[prot_id].sequence == 'TBI':
                         proteins[prot_id].sequence = sequence
                         fasta_file.seek(last_line)