Changeset 21

Timestamp:

Aug 11, 2010, 4:03:20 PM (11 years ago)

Author:

j@…

bzr:base-revision:

j@dannynavarro.net-20100805134225-vax3gq8e4r8uvuhu

bzr:committer:

Danny Navarro <j@dannynavarro.net>

bzr:file-ids:

mzcms/models.py models.py-20100730084238-fjjwldiefr0w07zv-4

bzr:mapping-version:

v4

bzr:repository-uuid:

724254b2-fbe6-419d-9466-c04ef4c9d29d

bzr:revision-id:

j@dannynavarro.net-20100805153553-bbo0yp7iqreb5ilb

bzr:revno:

21

bzr:revprop:branch-nick:

trunk

bzr:root:

trunk

bzr:timestamp:

2010-08-05 17:35:53.127000093 +0200

bzr:user-agent:

bzr2.1.2+bzr-svn1.0.3

svn:original-date:

2010-08-05T15:35:53.127000Z

Message:

pseudocode for parsing

File:

• trunk/mzcms/models.py (modified) (5 diffs)

trunk/mzcms/models.py

@@ -7 +7 @@
 class Proteins(Folder):
     """A container for proteins objects"""
-    pass
+    def __init__(self):
+        self.name = 'proteins'
 
 class Protein(Persistent):
@@ -18 +19 @@
 class Peptides(Folder):
     """A container for peptides"""
-    pass
+    def __init__(self):
+        self.name = 'peptides'
 
 class Peptide(Persistent):
@@ -29 +31 @@
 class Spectra(Folder):
     """A Container for spectra"""
-    pass
+    def __init__(self):
+        self.name = 'spectra'
+
 
 class Spectrum(Persistent):
@@ -42 +46 @@
 class Psms(Folder):
     """A container for psms"""
-    pass
+    def __init__(self):
+        self.name = 'psms'
 
 class Psm(Persistent):
@@ -59 +64 @@
     if not 'app_root' in zodb_root:
         app_root = Experiment()
-        zodb_root['app_root'] = app_root
+#        folders = parse_results(files)
+#        for folder in folders:
+#            app_root[folder.name] = folder
+#        zodb_root['app_root'] = app_root
         import transaction
         transaction.commit()
+
     return zodb_root['app_root']