Changes between Version 2 and Version 3 of openMS_peakPicker_Orbitrap_openMS_v1


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Timestamp:
Nov 18, 2010, 7:01:01 PM (9 years ago)
Author:
b.hoekman@…
Comment:

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  • openMS_peakPicker_Orbitrap_openMS_v1

    v2 v3  
    2929      <ITEM name="test" value="false" type="string" description="Enables the test mode (needed for software testing only)" tags="advanced" restrictions="true,false" />
    3030      <NODE name="algorithm" description="Algorithm parameters section">
    31         <ITEM name="signal_to_noise" value="2" type="float" description="Minimal signal to noise ratio for a peak to be picked." restrictions="0:" />
     31        <ITEM name="signal_to_noise" value="0" type="float" description="Minimal signal to noise ratio for a peak to be picked." restrictions="0:" />
    3232        <ITEM name="centroid_percentage" value="0.8" type="float" description="Percentage of the maximum height that the raw data points must exceed to be taken into account for the calculation of the centroid. If it is 1 the centroid position corresponds to the position of the highest intensity." tags="advanced" restrictions="0:1" />
    33         <ITEM name="peak_width" value="0.1" type="float" description="Approximate fwhm of the peaks." restrictions="0:" />
     33        <ITEM name="peak_width" value="0.012" type="float" description="Approximate fwhm of the peaks." restrictions="0:" />
    3434        <ITEM name="estimate_peak_width" value="false" type="string" description="Flag if the average peak width shall be estimated. Attention: when this flag is set, the peak_width is ignored." restrictions="true,false" />
    3535        <ITEM name="fwhm_lower_bound_factor" value="0.7" type="float" description="Factor that calculates the minimal fwhm value from the peak_width. All peaks with width smaller than fwhm_bound_factor * peak_width are discarded." tags="advanced" restrictions="0:" />