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Diff Rev Age Author Log Message
(edit) @151   8 years b.hoekman
(edit) @150   8 years b.hoekman
(edit) @149   8 years b.hoekman
(edit) @148   8 years b.hoekman added functionality for calculating peptide masses and probable …
(edit) @147   8 years b.hoekman
(edit) @146   8 years b.hoekman Fixed Null pointer exception in AlignmentOf2DLC Spit up line in …
(edit) @145   8 years b.hoekman
(edit) @144   8 years b.hoekman Fixed mzMine to be able to run on same sample set in parallel.
(edit) @143   8 years b.hoekman
(edit) @142   8 years b.hoekman
(edit) @141   9 years b.hoekman
(edit) @140   9 years b.hoekman
(edit) @139   9 years b.hoekman
(edit) @138   9 years b.hoekman
(edit) @137   9 years b.hoekman
(edit) @136   9 years b.hoekman better error handling
(edit) @135   9 years b.hoekman
(edit) @134   9 years b.hoekman
(edit) @133   9 years b.hoekman
(edit) @132   9 years b.hoekman
(edit) @131   9 years b.hoekman
(edit) @130   9 years b.hoekman
(edit) @129   9 years b.hoekman
(edit) @128   9 years b.hoekman Fixed small mistake in the gaussian distribution class. Added a class …
(edit) @127   9 years b.hoekman
(edit) @126   9 years b.hoekman Fixed situation in which a lack of ms2 points in an mzML file could …
(edit) @125   9 years b.hoekman
(edit) @124   9 years b.hoekman Moved ScanSpeedStats? into its own folder.
(edit) @123   9 years b.hoekman Adding additional export to tab options!!
(edit) @122   9 years b.hoekman Added more options to export FeatureMatrix? to tab
(edit) @121   9 years b.hoekman Added functions for printing usefull protein information to tab.
(edit) @120   9 years b.hoekman Added 3 new direct export Options.
(edit) @119   9 years b.hoekman
(edit) @118   9 years b.hoekman Added merged uniqueIDs to the files after the CombineSplitPeaks? step. …
(edit) @117   9 years b.hoekman
(edit) @116   9 years b.hoekman Added unique exporter per class, and made class order fixed!!
(edit) @115   9 years b.hoekman fixed modifat loading and writing away
(edit) @114   9 years b.hoekman correted loading modifications At!!
(edit) @113   9 years b.hoekman
(edit) @112   9 years b.hoekman
(edit) @111   9 years b.hoekman
(edit) @110   9 years b.hoekman
(edit) @109   9 years b.hoekman
(edit) @108   9 years b.hoekman just
(edit) @107   9 years b.hoekman Module for adding peptide identifications to a feature Matrix (work …
(edit) @106   9 years b.hoekman Finished a PidRes? parser (just for getting the peptide / protein …
(edit) @105   9 years b.hoekman
(edit) @104   9 years b.hoekman few classes to parse PidResXML Not completely done.
(edit) @103   10 years b.hoekman fixed OpenMS PeakPicker?.
(edit) @102   10 years b.hoekman
(edit) @101   10 years b.hoekman Fixed error in OpenMS FeatureMatching?
(edit) @100   10 years b.hoekman fixed error when percentile value was asked but too few points are in …
(edit) @99   10 years b.hoekman updated to the latest version
(edit) @98   10 years b.hoekman
(edit) @97   10 years b.hoekman added forgotten filter
(edit) @96   10 years b.hoekman fixed issue if there was 2 times mzML in a fileName!!
(edit) @95   10 years b.hoekman
(edit) @94   10 years b.hoekman fixed some error's
(edit) @93   10 years b.hoekman
(edit) @92   10 years b.hoekman fixed implementation to only work on msLevel 1 data.
(edit) @91   10 years b.hoekman Added a module to convert Profile data to Centroid data.
(edit) @90   10 years b.hoekman exporters for XYSeries to tab or svg/png
(edit) @89   10 years b.hoekman Using injectTime if present for scanDuration
(edit) @88   10 years b.hoekman Added export option for time range in openMS to APML export
(edit) @87   10 years b.hoekman Added IonInjectTime? to internal LCMS class
(edit) @86   10 years b.hoekman update because of change in mgf exporter.
(edit) @85   10 years b.hoekman Added parser for ProgenesisTSV format. Updated other stuff as well.
(edit) @84   10 years b.hoekman Exports the MGF file with a nice name.
(edit) @83   10 years b.hoekman modified export options abit.
(edit) @82   10 years b.hoekman Added module which exports, a fileset to mgf files.
(edit) @81   10 years b.hoekman
(edit) @80   10 years b.hoekman Fixed issue with creating fileSets in galaxy.
(edit) @79   10 years b.hoekman Added Classes for LC-MS/MS data support
(edit) @78   10 years b.hoekman Fixed mzML in fileSets.
(edit) @77   10 years b.hoekman Added a Class for exporting a Histogram to SVG or PNG
(edit) @76   10 years b.hoekman fixed mzML issue in galaxy.
(edit) @75   10 years b.hoekman
(edit) @74   10 years b.hoekman Added module for makeing a report.
(edit) @73   10 years b.hoekman Added more functionality
(edit) @72   10 years b.hoekman
(edit) @71   10 years b.hoekman Added fileAppend Support
(edit) @70   10 years b.hoekman Made some functions in LoadMZML public (to allow for scan by scan …
(edit) @69   10 years b.hoekman Fixed issue with CompletePHP now parsing minutes as minutes (when unit …
(edit) @68   10 years b.hoekman . see next comment
(edit) @67   10 years b.hoekman Fixed small error in which time parsed as minutes was / by 60 to make …
(edit) @66   10 years b.hoekman Made some changes to keep log4j from logging a lot of output for jmzml
(edit) @65   10 years b.hoekman Relocated
(edit) @64   10 years b.hoekman fixed small issue with superhirn module
(edit) @63   10 years b.hoekman
(edit) @62   10 years b.hoekman Modified SuperHirn? so that names are only modified at one place!!
(edit) @61   10 years b.hoekman fixed manifest.
(edit) @60   10 years b.hoekman Fixed extension to mzML in ZipFileSet? module Fixed names being changed …
(edit) @59   10 years b.hoekman Removed useless printing of scan number etc.
(edit) @58   10 years b.hoekman Fixed an error in exportSpikedPeak module. Fixed an error in SuperHirn?
(edit) @57   10 years b.hoekman
(edit) @56   10 years b.hoekman Tested and upgraded mzMine to mzML usage!!
(edit) @55   10 years b.hoekman Update manifest with latest jar-libraries
(edit) @54   10 years b.hoekman 2D-LC-MS modules
(edit) @53   10 years b.hoekman removed deprecated flag in LoadmzXMLFile class.
(edit) @52   10 years b.hoekman Replaced linux commandline copy with FileUtils? copy. Replaced mzXML as …
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