Michael Van Vliet

Manager of projects

ConceptRewrite A frontend built to search, edit and create concepts for ConceptWiki
conceptwiki A universal open access repository of editable concepts. This is part of Open PHACTS.
cw-api-client A generic ConceptWiki API client for Java/Groovy applications
nbiceng Generic code and mailing lists for the BioAssist Engineering Team
sysadmin General system administration scripts used by the BioAssist Engineering Team

Member of projects

BRSP201017 Spectral Tree Viewer visualize MultiMultistage Mass Spectrometry data in a browser.
data-mining Automatically recognizing concepts in human-readable text. This project uses Peregrine as text indexer. It searches for known terms in an input text and maps them to concepts in an ontology. If a term could refer to more than one concept then Peregrine tries to disambiguate it.
fgweb A web-interface that allows to integrate functional genomics data and bioinformatic tool flows with a minimum of time investment in robust web-based software.
galaxytools Tools developed by various groups in the BioAssist platforms together with their tool configs for installation in a Galaxy server.
wikidata A web site application that stores knowledge and information using concept triples. Users can both view and edit the contents of the triple store using a wiki-like application.