root

Name Size Rev Age Last Change
cobios 4 5 years jjbot: Initial import of new code base.
config 254 4 years jjbot: Added first version of sources config file.
container 276 4 years jjbot: Parser improvements. Fixed type and set IDs in biomart parser. Added …
data 259 4 years jjbot: Added additional ibidas terms to describe relations in the db.
db 6 5 years marchulsman: Add postgres code, fix setup.py
debug 159 5 years jjbot: First version of the pylint configuration file. Use this to check the …
doc 171 5 years jjbot: Small addition to todo file.
examples 257 4 years pvkouteren:
log 242 5 years pvkouteren: Added documentation and removed duplicate and old code which isn't needed …
modules 242 5 years pvkouteren: Added documentation and removed duplicate and old code which isn't needed …
parsers 305 4 years jjbot: Many changes in the different parsers. basicparses can now be used as an …
representor 321 4 years marchulsman: Small fixes
sql 263 4 years maarten: fixed DB bugs
src 310 4 years marchulsman: Solve some bugs, add bitor_reduceat function in cutils, rename map to rmap
test 4 5 years jjbot: Initial import of new code base.
unit 302 4 years jjbot: Changed class name from FieldParser? to ArrayParser?, now base names on the …
web 283 4 years jjbot: Added saveItems method. Cleanups.
config.py 1.3 KB 148 5 years pvkouteren: Summary: Logging capabilities, better database setup, config file reading …
ibidas2.py 1.0 KB 149 5 years pvkouteren: Minor fixes to ibidas2.py and setup_db.py Added test file patricktest.py
ibidas.py 3.3 KB 281 4 years jjbot: Added parsing of commandline arguments. Can now set: host, port, db_name & …
IbidasSOAP.py 1.7 KB 242 5 years pvkouteren: Added documentation and removed duplicate and old code which isn't needed …
IbidasXMLRPCLight.py 0.6 KB 68 5 years jjbot: Small changes to experiment with the xml rpc server.
Makefile 49 bytes 4 5 years jjbot: Initial import of new code base.
patricktest.py 11.7 KB 234 5 years pvkouteren: Added Hypergeometric test to statistics module and AtomicServices? Added …
run_imports.py 1.9 KB 53 5 years pvkouteren: Adjusted RefSeq? parser Fixed issue with Fasta parser
run_imports_jan.py 4.4 KB 278 4 years jjbot: Added BioMart? flusher statement to run_imports_jan.
setup.ini 222 bytes 235 5 years pvkouteren: Adjusted default setup config WITH numpy_path.
setup.py 3.0 KB 310 4 years marchulsman: Solve some bugs, add bitor_reduceat function in cutils, rename map to rmap
setup_db.py 20.5 KB 242 5 years pvkouteren: Added documentation and removed duplicate and old code which isn't needed …
test.py 1.0 KB 119 5 years marchulsman: Restructured capability system (work in progress! not everything …
testhugo.py 0.6 KB 210 5 years marchulsman: Fix some bugs in qg_transform
testshort.py 245 bytes 4 5 years jjbot: Initial import of new code base.
todo.txt 1.6 KB 146 5 years jjbot: Update of the todo file.
unitsuite.py 325 bytes 301 4 years jjbot: First version of new basicparsers: this module should provide simple parse …
xmlrpc_tmp.py 0.8 KB 264 4 years jjbot: Changes to xmlrpc server and message class.
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