source: @ 321

Name Size Rev Age Author Last Change
cobios 4   8 years jjbot Initial import of new code base.
config 254   7 years jjbot Added first version of sources config file.
container 276   7 years jjbot Parser improvements. Fixed type and set IDs in biomart parser. Added …
data 259   7 years jjbot Added additional ibidas terms to describe relations in the db.
db 6   7 years marchulsman Add postgres code, fix setup.py
debug 159   7 years jjbot First version of the pylint configuration file. Use this to check the …
doc 171   7 years jjbot Small addition to todo file.
examples 257   7 years pvkouteren
log 242   7 years pvkouteren Added documentation and removed duplicate and old code which isn't needed …
modules 242   7 years pvkouteren Added documentation and removed duplicate and old code which isn't needed …
parsers 305   7 years jjbot Many changes in the different parsers. basicparses can now be used as an …
representor 321   6 years marchulsman Small fixes
sql 263   7 years maarten fixed DB bugs
src 310   6 years marchulsman Solve some bugs, add bitor_reduceat function in cutils, rename map to rmap
test 4   8 years jjbot Initial import of new code base.
unit 302   7 years jjbot Changed class name from FieldParser? to ArrayParser?, now base names on the …
web 283   7 years jjbot Added saveItems method. Cleanups.
config.py 1.3 KB 148   7 years pvkouteren Summary: Logging capabilities, better database setup, config file reading …
ibidas2.py 1.0 KB 149   7 years pvkouteren Minor fixes to ibidas2.py and setup_db.py Added test file patricktest.py
ibidas.py 3.3 KB 281   7 years jjbot Added parsing of commandline arguments. Can now set: host, port, db_name & …
IbidasSOAP.py 1.7 KB 242   7 years pvkouteren Added documentation and removed duplicate and old code which isn't needed …
IbidasXMLRPCLight.py 614 bytes 68   7 years jjbot Small changes to experiment with the xml rpc server.
Makefile 49 bytes 4   8 years jjbot Initial import of new code base.
patricktest.py 11.7 KB 234   7 years pvkouteren Added Hypergeometric test to statistics module and AtomicServices? Added …
run_imports.py 1.9 KB 53   7 years pvkouteren Adjusted RefSeq? parser Fixed issue with Fasta parser
run_imports_jan.py 4.4 KB 278   7 years jjbot Added BioMart? flusher statement to run_imports_jan.
setup.ini 222 bytes 235   7 years pvkouteren Adjusted default setup config WITH numpy_path.
setup.py 3.0 KB 310   6 years marchulsman Solve some bugs, add bitor_reduceat function in cutils, rename map to rmap
setup_db.py 20.5 KB 242   7 years pvkouteren Added documentation and removed duplicate and old code which isn't needed …
test.py 1.0 KB 119   7 years marchulsman Restructured capability system (work in progress! not everything …
testhugo.py 608 bytes 210   7 years marchulsman Fix some bugs in qg_transform
testshort.py 245 bytes 4   8 years jjbot Initial import of new code base.
todo.txt 1.6 KB 146   7 years jjbot Update of the todo file.
unitsuite.py 325 bytes 301   7 years jjbot First version of new basicparsers: this module should provide simple parse …
xmlrpc_tmp.py 861 bytes 264   7 years jjbot Changes to xmlrpc server and message class.
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