Timeline


and

17-06-11:

14:29 Changeset [1934] by work@…
tagging 0.8.4 release
14:28 Changeset [1933] by work@…
- up to 0.8.4
13:56 Changeset [1932] by robert@…
Another fix for #485
10:11 Changeset [1931] by robert@…
Users will be logged out from modules when logging out from GSCF now. See …
09:28 Ticket #477 (Sample importer hangs on last step when event group names already exist) closed by business@…
duplicate: Hard to test now that the wizard also does a better job of checking for …
09:18 Ticket #437 (Excel importer improvements) closed by business@…
fixed
09:04 Ticket #467 (install basefilters for all possible pages) closed by business@…
fixed: Fixed.
08:25 Ticket #480 (Error message when searching on field without filling in a value) closed by business@…
fixed: Resolved.

16-06-11:

14:27 Changeset [1930] by t.w.abma@…
- upgraded gdtImporter to 0.4.6.1
12:48 Ticket #465 (import samplelist won't proceed to final step) closed by janneke@…
worksforme
10:08 Ticket #486 (import wizard doesn't remember my settings in step1) closed by janneke@…
fixed

15-06-11:

17:54 Changeset [1929] by t.w.abma@…
- upgraded gdtImporter to 0.4.6.0 (dynamic settings on first page now …
13:55 Ticket #487 (Improve study edit icons) closed by work@…
wontfix: Won't fix, icons have already been changed, and I have discusses with …
13:30 Ticket #487 (Improve study edit icons) created by business@…
Put back study edit icons as discussed.
10:10 Ticket #486 (import wizard doesn't remember my settings in step1) created by janneke@…
When I import subjects and click back and forth through the import wizard …
10:04 Ticket #452 (importer doesn't give excel preview) closed by janneke@…
fixed

14-06-11:

18:15 Ticket #485 (Integration of modules and the logout functionality could use some work.) created by taco@…
At the moment, a manual logout from GSCF does not invalidate sessions that …
16:05 Changeset [1928] by t.w.abma@…
- upgraded gdtImporter to 0.4.5.9
15:36 Ticket #472 (time indication in confirmation step not correct) closed by janneke@…
fixed
14:04 Changeset [1927] by work@…
resolves #472
12:08 Ticket #484 (nullpointer exception on http://test.dbnp.org/) closed by work@…
worksforme: I don't see anything weird?
12:04 Ticket #484 (nullpointer exception on http://test.dbnp.org/) created by robert@…
I've deployed a new version of the sequencing module on test.dbnp.org. …
10:08 Ticket #483 (Implement authentication method on assay level) created by business@…
Right now modules can only find study details for all the assays in the …
09:21 Changeset [1926] by robert@…
Default cache timeout should be higher than zero on production systems. …

09-06-11:

18:03 Changeset [1925] by business@…
attempt to fix errors that occur at first ever run-app for gscf
17:51 Ticket #443 (samples are created too early) closed by work@…
wontfix: Currently, you can by importing your samples. The problem with this …
17:13 Changeset [1924] by work@…
- resolved #479
17:02 Changeset [1923] by work@…
- resolves # 469 - added tiptip support
14:10 Changeset [1922] by work@…
- removed all default instance configuration in favor of just one …
12:48 Changeset [1921] by t.w.abma@…
- added filter to BaseFilters? - added security annotation to all …
10:08 Ticket #466 (defaults in dropdown selection importer should be empty entry) closed by janneke@…
fixed

08-06-11:

16:09 Changeset [1920] by t.w.abma@…
- upgraded gdtImporter to 0.4.5.8
16:06 Changeset [1919] by robert@…
Removed debug statements
14:37 Changeset [1918] by work@…
- uncommented inline plugin gdtimporter in build config
11:24 Changeset [1917] by robert@…
Solved bugs in searching: - exception when searching for [any field in any …

07-06-11:

16:53 Changeset [1916] by t.w.abma@…
- updated gdtImporter to 0.4.5.7
15:27 Ticket #436 (Duplicate 'invalid:' options added) closed by t.w.abma@…
fixed: Fixed in revision 360, existing logic was fine, but seemed that the entity …
14:25 Ticket #482 (enable live search in sample to assay step (step 5)) created by janneke@…
In my current study there are at least 1700 samples, and more will be …
12:05 Changeset [1915] by s.h.sikkema@…
gdtImporter 0.4.5.6
10:25 Ticket #481 (Improve querying) created by robert@…
- Restrict input for values when searching in stringlist/ontology fields - …

06-06-11:

21:24 Ticket #480 (Error message when searching on field without filling in a value) created by business@…
If I login onto CI, and I enter any field and input nothing in the textbox …
20:59 Changeset [1914] by kees.vanbochove@…
updated email registration message
17:30 ServerAdministration edited by work@…
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17:27 ServerAdministration edited by work@…
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17:11 ServerAdministration edited by work@…
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17:11 ServerAdministration edited by work@…
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17:11 ServerAdministration edited by work@…
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17:05 ServerAdministration edited by work@…
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16:58 ServerAdministration edited by work@…
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16:55 ServerAdministration edited by work@…
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16:50 ServerAdministration edited by work@…
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16:39 ServerAdministration edited by work@…
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16:32 ServerAdministration edited by work@…
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16:31 ServerAdministration edited by work@…
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16:30 ServerAdministration created by work@…
14:47 Changeset [1913] by robert@…
Fixed a bug in wildcard searches: now the system also searches through …
12:29 Ticket #468 (Please wait... after editing contacts takes quite long) closed by business@…
fixed: This problem is solved now, was probably caused by the other GSCF …
12:05 Ticket #462 (message of filling missing mappings can be removed) closed by business@…
fixed: Fixed now by updating status message.
12:04 Ticket #460 (import wizard asks for fields that are not required in study wizard) closed by business@…
duplicate: Duplicate of #462
12:00 Ticket #457 (Query on Template results in exception) closed by business@…
fixed: Tested this, works now.
11:59 Ticket #455 (Importer doesn't recognize subjects, without showing which one) closed by business@…
fixed: Upload of subject assignments should be done by adding a 'subject name' …
11:55 Ticket #479 (Add 'import data for this study' as edit option after completing a study ...) created by business@…
When the study edit/create wizard is done, it offers an option to view or …
11:31 Ticket #427 (samples page in study view is slow) closed by business@…
worksforme: Study 'linea23' (700+ samples) takes about 2s loading time in Firefox on …
11:15 QuickStartServer edited by work@…
(diff)
11:04 Ticket #417 (Improve 'simple wizard' to also be able to automatically infer study ...) closed by business@…
fixed: Done now via gdtimporter.
11:03 Ticket #478 (Seperate temporary uploads from permanent uploads, and make sure permanent ...) created by work@…
Currently, there is no difference between file upload folders. Some are …
10:51 Ticket #476 (samples wrongly deleted when deleting certain event group) closed by janneke@…
fixed
10:21 Changeset [1912] by work@…
Resolves #476

01-06-11:

19:46 Changeset [1911] by work@…
- changed delete eventgroup logic and added debugging
18:03 Changeset [1910] by kees.vanbochove@…
first step on the way to solve #476
17:32 Ticket #477 (Sample importer hangs on last step when event group names already exist) created by business@…
If you import samples, attach them to existing subjects, and the generated …
17:10 Ticket #476 (samples wrongly deleted when deleting certain event group) created by janneke@…
(Very much related to #448) I deleted an eventgroup which had also …
16:06 Changeset [1909] by work@…
Automated continuous integration commit of minified JS/CSS
16:05 Changeset [1908] by robert@…
Improvements in querying in order to be able to refine searches in a …
16:03 Changeset [1907] by robert@…
Bugfix with uploaded files with less than 9 characters
16:00 Changeset [1906] by work@…
changed icons and link order
15:55 Ticket #475 (create production database backup script) created by work@…
Create a script that dumps the PostgreSQL database and scp's it to an …
15:42 Changeset [1905] by work@…
- added support for direct edit jumps into wizard tabs, part one of #469
15:35 Ticket #474 (Starting from new 0.8.3 checkout results in errors) closed by work@…
wontfix: Yeah, known issue... it is caused by the AST Transformations and the …
15:21 Ticket #474 (Starting from new 0.8.3 checkout results in errors) created by janneke@…
After a fresh checkout of 1904 and grails run-app, an exception is thrown. …[…]
15:20 New download gscf-0.8.3-www.war created by work@…
(44.2 MB) GSCF 0.8.3 production release (demo'd on the NMC conference)
14:29 Ticket #473 (add sample template in eventstable) created by janneke@…
In my study (pp2 on test.dbnp.org) I have a sampling event 'whole body …
14:06 Ticket #472 (time indication in confirmation step not correct) created by janneke@…
The starttime or endtimes in the confirmation step of the wizard are not …
09:52 Ticket #471 (Add more information in samplename) created by janneke@…
Currently on ci samplenames include sampletissue template name if this is …

31-05-11:

18:12 Ticket #470 (details link should use getAssayURL) created by tjeerd@…
When we look at a study in GSCF and select the assay tab a details link is …
15:00 Ticket #446 (advanced search for template name not correct) closed by janneke@…
fixed
12:25 Changeset [1904] by robert@…
Fixed a bug for case-insensitive search in 'complex' fields
11:01 Changeset [1903] by robert@…
Bugfix for searches in 'complex' fields with no results (#446)
10:44 Ticket #469 (when click edit, wizard should redirect to correct page) created by janneke@…
When I click edit from the study view in GSCF, I expect the edit wizard to …
10:09 Changeset [1902] by robert@…
Resolving issues with searching (#446)

30-05-11:

23:43 Ticket #468 (Please wait... after editing contacts takes quite long) created by business@…
If you edit contacts in the wizard and close the popup, you get Please …
23:36 Ticket #467 (install basefilters for all possible pages) created by business@…
I found out that /person/list is not protected by a login. This is bad as …
15:01 Changeset [1901] by work@…
tagging 0.8.3 release
14:55 Ticket #466 (defaults in dropdown selection importer should be empty entry) created by janneke@…
All fields in the import wizard are required to specify in which study and …
14:54 Changeset [1900] by work@…
- to 0.8.3
14:52 Changeset [1899] by work@…
- academic study template --> nmc study template
14:51 Changeset [1898] by work@…
- academic study template --> nmc study template
14:42 Changeset [1897] by work@…
- bugfixed the table editor
14:33 Changeset [1896] by work@…
- fixed table editor issues - upgraded gdt - upgraded gdtimporter

28-05-11:

20:58 Changeset [1895] by work@…
- table editor bugfix
09:42 Changeset [1894] by s.h.sikkema@…
gdtImporter version 0.4.5.4

27-05-11:

17:37 Changeset [1893] by work@…
- bye bye grom (for now!)
17:05 Changeset [1892] by work@…
- removed obsolete importer views
15:44 Changeset [1891] by work@…
- disabled ajax error div in importer and study wizard
15:35 Changeset [1890] by work@…
- removed development buttons - fixed samples view to show proper sampling …
13:37 Ticket #439 (Events timeline in some studies not visible) closed by janneke@…
fixed
13:25 Changeset [1889] by work@…
- wizard events page previous link should behave the same as the rest …
12:59 Changeset [1888] by work@…
.solves #439
11:56 Changeset [1887] by s.h.sikkema@…
gdtImporter version 0.4.5.2
11:56 Changeset [1886] by work@…
- resolves issue #412 - make application title configurable through …
10:28 Changeset [1885] by s.h.sikkema@…
gdtImporter version 0.4.5.1

26-05-11:

15:19 Changeset [1884] by robert@…
Implemented getAuthorizationLevel rest method for assays
12:42 Ticket #465 (import samplelist won't proceed to final step) created by janneke@…
I tried to import samplelist, but the wizard won't proceed to the final …
11:19 Ticket #464 (importer doesn't recognize excel file in IE7) created by janneke@…
When I use the importer in IE (run as IE7) (studies.nmcdsp.org) it doesn't …
10:26 Ticket #459 (selecting multiple subjects won't select all checkboxes) closed by janneke@…
fixed: (ok, I will, encountered this in chrome though) now it is working indeed
10:19 Ticket #461 (Error when searching on template) closed by robert@…
worksforme: Can't reproduce this error

25-05-11:

18:45 New download gscf-0.8.2-www.war created by work@…
(44.5 MB) GSCF 0.8.2 production release
18:29 Changeset [1883] by work@…
- gdt up to 0.0.51 to fix #459
17:59 Ticket #463 (change groupnames when importing events) created by janneke@…
When importing events, groupnames are created based on …
17:49 Ticket #459 (selecting multiple subjects won't select all checkboxes) reopened by janneke@…
17:27 Changeset [1882] by s.h.sikkema@…
Fixed an assayService unit test
16:32 Ticket #413 (Bugs when exporting assays) closed by robert@…
fixed: I've tested it as good as possible on CI, and it seemed to work. I will be …
16:25 Ticket #462 (message of filling missing mappings can be removed) created by janneke@…
I uploaded a list of events, and attached them to subjects. In the before …
16:23 Ticket #461 (Error when searching on template) created by business@…
If I search on CI (logged in as user) with these criteria: * …
16:10 Changeset [1881] by work@…
tagging 0.8.2
16:05 Ticket #458 (multiple selection of subjects won't change all rows) closed by work@…
fixed: was already fixed
16:02 Ticket #459 (selecting multiple subjects won't select all checkboxes) closed by work@…
fixed: is already fixed.…
15:57 Changeset [1880] by work@…
- application up to 0.8.2
15:56 Ticket #454 (importer gives right suggestion, but I can't edit) closed by janneke@…
worksforme: Closing this ticket because wizard was right, there were 5 entities and I …
15:53 Changeset [1879] by work@…
- fixed issue with the advanced query button not being enabled
15:36 Changeset [1878] by work@…
- using gdt 0.0.50
15:05 Changeset [1877] by s.h.sikkema@…
gdtImporter 0.4.5
15:04 Ticket #460 (import wizard asks for fields that are not required in study wizard) created by janneke@…
I imported events by the importer and chose compound challenge. In this …
14:50 Ticket #459 (selecting multiple subjects won't select all checkboxes) created by janneke@…
When I want to assign my subjects into groups (between step3 and 4 in …
14:35 Ticket #458 (multiple selection of subjects won't change all rows) created by janneke@…
When I import subjectdata (through import part of study data) and species …
13:58 Changeset [1876] by s.h.sikkema@…
upgraded gdtImporter to 0.4.4
13:32 Ticket #453 (importer doesn't match sample with subjects) closed by business@…
fixed: This problem is now solved, samplelist input is confirmed working.
12:50 Changeset [1875] by work@…
- datatables is in conflict with gdtimporter, also it is not required to …
11:46 Ticket #406 (template names should be unique) reopened by robert@…
How is this a duplicate of #314? This ticket is about template names, #314
11:42 Ticket #427 (samples page in study view is slow) reopened by robert@…
This is not a non-issue. The view became slow with only 500 samples, which …

24-05-11:

18:59 Ticket #434 (Nullpointer exception in sample validation) closed by work@…
worksforme
18:56 Ticket #388 (Add links to modules in GSCF) closed by work@…
fixed
18:54 Ticket #406 (template names should be unique) closed by work@…
duplicate: duplicate of #314
18:51 Changeset [1874] by work@…
- sort to lowercase
18:50 Ticket #73 (ability to save the filled field values of an entity into a 'preset') closed by work@…
invalid
18:45 Ticket #328 (Missing the option of multiple study deletion) closed by work@…
wontfix: Deleting multiple studies at once is a very rare usecase and for the times …
18:42 Ticket #127 (take into account ontology versioning, make more use of Ontocat) closed by work@…
wontfix
18:40 Ticket #114 (Possibility to query studies/experiments ) closed by work@…
wontfix: opened 19 months ago... I think we already have querying tools that cover …
18:39 Ticket #342 (emails can't be sent from test.dbnp.org) closed by work@…
fixed
18:37 Ticket #427 (samples page in study view is slow) closed by work@…
wontfix: bit of a non issue... if you have lots of data everything becomes slow …
18:34 Ticket #456 (no clone option in 5.Assay step) closed by work@…
duplicate: partly duplicates #447, and solved in #447
18:26 Ticket #407 (add information (quetionmark) to assy step) closed by work@…
fixed: resolved in r1873
18:26 Changeset [1873] by work@…
- resolves #407
18:14 Changeset [1872] by work@…
- remove obsolete jquery-ui
18:13 Ticket #423 (in study wizard as in study overview sample order not consistent) closed by work@…
worksforme: cannot reproduce, looks fine here if I look up 001Linea on ci…
18:03 Changeset [1871] by work@…
- upgraded jquery plugin - upgraded jquery-ui - upgraded spring security …
17:06 Changeset [1870] by work@…
- improved sample sorting for #423
17:05 Changeset [1869] by s.h.sikkema@…
using gdtImporter 0.4.3
16:56 Changeset [1868] by s.h.sikkema@…
removed obsolete function 'isSamplingEvent' from Event
15:22 Ticket #161 (GSCF Documentation) closed by work@…
wontfix
12:38 Ticket #447 (table-editor: create the possibility to allow the table-editor's multi ...) closed by work@…
fixed: improved feedback in r1867
12:38 Changeset [1867] by work@…
- improved feedback for #447
12:17 Changeset [1866] by robert@…
Fix for searching in template names (#446 and #457)
12:06 Ticket #448 (Make sample generation a user-aware step) closed by work@…
invalid: But I cannot do much with such a bug report... Closing issue as invalid …

23-05-11:

18:11 Ticket #457 (Query on Template results in exception) created by business@…
Searching on sample template = Blood on CI results in: […]
17:28 Changeset [1865] by work@…
- resolves gscf #447 - gdt up to 0.0.49
16:36 Changeset [1864] by s.h.sikkema@…
in exporter: module error display improvements (ie. display on screen but …
13:13 Ticket #451 (Error creating minimal study) closed by s.h.sikkema@…
fixed
13:05 Changeset [1863] by work@…
- resolves #451
12:45 Changeset [1862] by work@…
- fixed setup message on home page
12:26 Changeset [1861] by work@…
- gdt up to 0.0.48 (vertical scrollbars fixed)
12:25 Changeset [1860] by work@…
- whoops
12:20 Ticket #185 (Set up an initial version of the 'getting started' wizard) closed by work@…
fixed: - working setup wizard - changed default configuration - added title with …
12:19 Changeset [1859] by work@…
- resolves #185
11:45 Changeset [1858] by work@…
- resolves #423
11:33 Ticket #442 (distinciton between event and sampling event in wizard is unclear) closed by janneke@…
fixed
11:23 Changeset [1857] by work@…
- resolves #423
11:12 Ticket #456 (no clone option in 5.Assay step) created by janneke@…
In the 5.Assay step of the study wizard there is no option to clone my …
11:00 Changeset [1856] by work@…
- resolves #442
10:43 Ticket #425 (total rewrite of table editor) closed by work@…
fixed: resolved in GDT  323, …

20-05-11:

14:20 Ticket #455 (Importer doesn't recognize subjects, without showing which one) created by janneke@…
I imported a large samplelist, but the importer couldn't match these with …
13:54 Ticket #454 (importer gives right suggestion, but I can't edit) created by janneke@…
I imported a long samplelist, with 2 identical rows. The importer rightly …
11:17 Ticket #453 (importer doesn't match sample with subjects) created by janneke@…
I tried several options to match my samplelist import (see …
10:13 Ticket #452 (importer doesn't give excel preview) created by janneke@…
Import part of study design --> I select excel file and assign my …

19-05-11:

17:07 Ticket #449 (When fetching measurements from modules, GSCF should provide a ...) closed by robert@…
fixed: The getMeasurements request had to be sent using POST, because the query …
17:04 Changeset [1855] by t.w.abma@…
- upgraded gdtImporter to 0.4.2 (infer design functionality added for …
16:59 Ticket #438 (name (identifier) should be mroe above in dropdown select) closed by t.w.abma@…
fixed: Implemented in revision [315].
16:57 Ticket #451 (Error creating minimal study) created by s.h.sikkema@…
Create -> Create a new Study Template: Academic study Title: aaa …
16:42 Changeset [1854] by robert@…
Disabled module cache for CI
16:19 Changeset [1853] by s.h.sikkema@…
changed module communication HTTP method to "POST" to deal with extremely …
16:02 Changeset [1852] by robert@…
Improved module communication when no parameters are given
10:58 Ticket #450 (import wizard should give suggestion of missing maps instead of error) created by janneke@…
When I import subjects into a study and my Excel files doesn't contain …
10:30 Ticket #449 (When fetching measurements from modules, GSCF should provide a ...) created by robert@…
When retrieving assay information, GSCF calls the /rest/getMeasurements …

18-05-11:

18:50 Ticket #448 (Make sample generation a user-aware step) created by business@…
Sample generation remains buggy sometimes. When I read the code it seems …
18:48 Changeset [1851] by kees.vanbochove@…
added sample template to generated sample name to make it easier to …
17:25 Ticket #425 (total rewrite of table editor) reopened by janneke@…
In subject step, if there are two different subject templtaes (in study …
15:09 Ticket #447 (table-editor: create the possibility to allow the table-editor's multi ...) created by janneke@…
Currently, you are only able to perform one controller action per table …
14:43 Ticket #446 (advanced search for template name not correct) created by janneke@…
Searching for template (subject) name, for example awl;eg gives all …
13:21 Ticket #445 (I miss show/hide buttons in 4.Sample step) created by janneke@…
When creating a large study, with multiple samplingevents upon hundreds of …
Note: See TracTimeline for information about the timeline view.