Timeline
Apr 4, 2011:
- 3:22 PM Changeset [1700] by
- Minor changes in documentation.
- 3:09 PM Changeset [1699] by
- Removed empty folder/package that is no longer in use.
- 3:05 PM Changeset [1698] by
- StudyXMLService and corresponding controller ready for hand over to …
- 2:12 PM Changeset [1697] by
- Caused buidl errors.
- 2:05 PM Changeset [1696] by
- Moved to StudyXMLService.
- 1:57 PM Changeset [1695] by
- This is the new structure for importing / exporting studies from / to …
- 1:32 PM Changeset [1694] by
- Moved methods from service into controller.
- 1:00 PM Changeset [1693] by
- Modules menu can be switched on or off in configuration
- 12:40 PM Changeset [1692] by
- Microcommit to trigger ci build
- 12:15 PM Changeset [1691] by
- GDT updated to 0.0.29
- 12:03 PM Changeset [1690] by
- Added modules to the menu (#388)
- 11:54 AM Changeset [1689] by
- Removed assayModule platform field (#387)
- 11:49 AM Ticket #389 (SimpleTox exporter doesn't work with samples without subject) created by
- If samples are added to a study, without a parentSubject, exporting …
- 11:00 AM Ticket #367 (Subject - event group assignments disappear) closed by
- fixed: Cannot reproduce anymore, closing.
- 10:54 AM Ticket #364 (delete events does not work) closed by
- fixed: Resolved.
- 10:46 AM Changeset [1688] by
- Administrator mails are also sent to administrators on non-production …
Apr 1, 2011:
- 7:03 PM Changeset [1687] by
- added /query to assayService module REST call URLs to be more …
- 11:06 AM Changeset [1686] by
- Added 'open' button in simple wizard
- 10:34 AM Ticket #388 (Add links to modules in GSCF) created by
- In GSCF, there are no links to the modules. Only using study -> show …
- 10:31 AM Changeset [1685] by
- Save buttons in simple wizard
Mar 31, 2011:
- 5:06 PM Ticket #387 (Remove assayModule.platform field) created by
- As it is not really used
- 5:03 PM Changeset [1684] by
- improvements in simple wizard
Mar 30, 2011:
- 11:11 AM Ticket #386 (HTML Doctype is not used on CI or test.dbnp.org, but is in development mode) created by
- The HTML doctype that is present in layouts/main.gsp: <!DOCTYPE html …
- 9:53 AM Ticket #385 (no excel file button) created by
- To import subject data I wanted to import an Excel file. But no button …
- 9:28 AM Ticket #382 (Cannot exclude sample template in simple wizard) closed by
- wontfix: This is intentional: the simple wizard is meant for studies that are …
Mar 29, 2011:
- 3:51 PM Ticket #384 (deleting contact person not possible) created by
- In the study wizard I added two contact persons, quick saved. But then …
- 3:34 PM Ticket #383 (should have multiple deletion of subjects) created by
- In my study there is a double set of subjects, but multiple deletion …
- 3:25 PM Ticket #382 (Cannot exclude sample template in simple wizard) created by
- I edit my new created study and add some more fields, then click next …
- 3:22 PM Changeset [1683] by
- Small improvements in simple wizard
- 3:22 PM Changeset [1682] by
- Fix for IE7 bug in querying
- 3:16 PM Ticket #381 (table editor scrollbar should also be on top) created by
- When the table editor contains many rows (e.g. subjects page of …
- 3:09 PM Changeset [1681] by
- Why doesn't CI redeploy?
- 3:06 PM Changeset [1680] by
- Solving problems with HTML tags around plain text output
- 3:00 PM Changeset [1679] by
- Test commit to solve publicationchooser problems
- 2:30 PM Changeset [1678] by
- Added entity names above table editor in simple wizard and added …
Mar 28, 2011:
- 2:41 PM Ticket #380 (Signout and profile links disappear) created by
- When you are in the "edit study" wizard and you click the "Profile" o …
- 12:55 PM Ticket #368 (delete assay in SAM gives Grails error) closed by
- wontfix: Please report SAM issues in the SAM bugtracker: https://trac.nbic.nl/ccm.
- 12:35 PM Changeset [1677] by
- Small fix for simple wizard importer
- 11:30 AM Ticket #379 (Importer doesn't sort studies) closed by
- fixed: Solved in revision [1676]. Now displays [no code] when study code is …
- 11:30 AM Changeset [1676] by
- - first page in importer wizard, study shows [no code] when study …
- 11:14 AM Ticket #379 (Importer doesn't sort studies) created by
- The study select box is not sorted by code. Also, 'null' can appear if …
- 10:58 AM Changeset [1675] by
- - changed check for environment on fileimport page; when not …
- 10:55 AM Ticket #378 (Show template description when choosing template) created by
- Each template has a description that gives the user more information …
Mar 25, 2011:
- 6:21 PM Changeset [1674] by
- small correction
Mar 24, 2011:
- 11:06 AM Ticket #377 (Mail registration templates are not working properly) created by
- The user registrataion it trying to send HTML e-mail, however the HTML …
- 10:10 AM Changeset [1673] by
- Added default mail sender to the configuration (#342) and improved …
Mar 23, 2011:
- 2:48 PM QuickStartServer edited by
- (diff)
- 2:36 PM Changeset [1672] by
- tagging 0.7.0
- 2:27 PM Changeset [1671] by
- - removed debug lines
- 2:17 PM Changeset [1670] by
- to 0.7.0
- 2:13 PM Ticket #335 (create webtests for importer) closed by
- fixed
- 2:04 PM Ticket #339 (improve home page) closed by
- fixed
- 1:55 PM Ticket #347 (importer wizard does not check for duplicate identifiers) closed by
- fixed
- 1:54 PM Ticket #159 (Excel exporter) closed by
- fixed
- 1:51 PM Ticket #342 (emails can't be sent from test.dbnp.org) reopened by
- Not fixed yet, and can be fixed now.
- 1:49 PM Ticket #371 (Events timeline has gone in last version) closed by
- fixed
- 1:48 PM Ticket #376 (public checkbox do not work) closed by
- fixed
- 1:32 PM Changeset [1669] by
- no more gmails
- 1:28 PM Changeset [1668] by
- Small bugfix
- 1:11 PM Changeset [1667] by
- - tried to resolve #342 but cannot fix the issue due to the mail …
- 1:10 PM Ticket #342 (emails can't be sent from test.dbnp.org) closed by
- wontfix: cannot fix at this stage, the issue is two fold: 1. on dbnp.org we …
- 12:19 PM Changeset [1666] by
- - a bit more spacing
- 12:16 PM Ticket #361 (importer: setting a non existant value in a Stringlist does not result ...) closed by
- fixed: Solved in [215], now contains the invalid value as an option in the …
- 11:38 AM Changeset [1665] by
- - resolves #376
- 11:25 AM Changeset [1664] by
- - gdt to 0.0.28, resolves #361
- 11:22 AM Changeset [1663] by
- - typo
- 11:06 AM Changeset [1662] by
- - changed lorem ipsum into introductionary text
Mar 22, 2011:
- 11:16 PM Changeset [1661] by
- - partly reverted the previous change (else instead of else if)
- 11:15 PM Changeset [1660] by
- - removed obsolete test cases
- 5:45 PM Changeset [1659] by
- Measurements are selected by default in assay excel exporter
- 4:33 PM Changeset [1658] by
- - importer wizard webtest working - native file input HTML element …
- 3:16 PM Ticket #372 (Error when adding a field to a template on CI) closed by
- fixed: Seems to be solved now. Closing the ticket
- 2:03 PM Changeset [1657] by
- - resolved issue #372
- 1:17 PM Ticket #376 (public checkbox do not work) created by
- If a study is made public via the checkbox, you are unable to close …
- 9:56 AM Changeset [1656] by
- - added 'hack' to fix the file upload via Ajax by stripping HTML from …
- 9:27 AM Ticket #375 (IE7 styling issues) created by
- GSCF looks quite bad in IE7. See attached screenshot: - everything is …
Mar 21, 2011:
- 3:04 PM Changeset [1655] by
- make sure all json methods also set a proper json header
- 1:41 PM Ticket #374 (GSCF 0.7.0 test war release: Homepage has Error 500: Executing action ...) created by
- On two different installs, following the QuickstartServer? document up …
- 1:39 PM Ticket #373 (Jumbar iFrame too small in webkit browsers from ci/test) created by
- When viewing an assay in a module (metabolomics) on CI or …
- 11:22 AM Ticket #372 (Error when adding a field to a template on CI) created by
- I tried to add a template field to a template. This resulted in the …
- 11:17 AM Ticket #359 (Error when deploying GSCF 0.6.6 test WAR release) closed by
- fixed
- 11:11 AM Ticket #339 (improve home page) reopened by
- The 'lorem ipsum' should be replaced (professional look). Jildau, any …
- 10:38 AM Ticket #340 (Repair fulltext search) closed by
- wontfix: removed searchable, simpleQuery, etcetera
- 10:35 AM Ticket #337 (admin interface for managing modules) closed by
- wontfix
- 10:34 AM Changeset [1654] by
- Fixed a bug in uploading files. The bug appeared in the simple wizard, …
- 10:22 AM Ticket #366 (importer does not import all colomns and rows) closed by
- invalid: bug report does not contain description of actual bug... closing…
Mar 18, 2011:
- 4:06 PM Changeset [1653] by
- - config file stuff into it's page logic
- 3:55 PM Changeset [1652] by
- - gone with searchable
- 3:32 PM Changeset [1651] by
- - removed searchable - worked on the initial version of the setup wizard
- 3:12 PM QuickStartServer edited by
- (diff)
- 2:29 PM WikiStart edited by
- (diff)
- 2:29 PM WikiStart edited by
- (diff)
- 2:10 PM Changeset [1650] by
- - fixed an issue where subject data was not saved within a refresh
- 1:29 PM Changeset [1649] by
- query -> search
- 1:24 PM Changeset [1648] by
- - advanced query page only shows previous query links if there are any …
- 12:37 PM Changeset [1647] by
- - changed admin topnav
- 12:13 PM Changeset [1646] by
- - removed obsolete SimpleQuery? - removed obsolete Query - changed …
- 11:34 AM Changeset [1645] by
- - test commit reponse header in gsp
- 10:09 AM Ticket #371 (Events timeline has gone in last version) created by
- In the study overview, the events timeline is suddenly gone... Any …
Mar 17, 2011:
- 9:01 PM Changeset [1644] by
- - test
- 5:42 PM Changeset [1643] by
- updated gscf instructions
- 5:34 PM QuickStartServer edited by
- (diff)
- 5:32 PM QuickStartServer edited by
- (diff)
- 5:23 PM QuickStartServer edited by
- (diff)
- 5:22 PM QuickStartServer edited by
- (diff)
- 3:58 PM Changeset [1642] by
- - templateEditor now scrolls down and focusses on the name field when …
- 3:18 PM Changeset [1641] by
- - gdt up to 0.0.26 (varchar 255 bugfix)
- 3:16 PM Changeset [1640] by
- - added simple study support (study page)
- 1:22 PM Ticket #352 (Importer creates 12 entities when importing 11) closed by
- fixed: Fixed in the gdtImporter, next release of GSCF should probably use the …
- 12:31 PM QuickStartServer edited by
- (diff)
- 12:02 PM Changeset [1639] by
- - changed 0.6.6.1 into 0.6.7 as the deploy script does not expect a 4 …
- 12:00 PM Ticket #332 (Store invalid values (Ontology, Stringlist, Date) in wizardError variable) closed by
- fixed: Is solved by returning an errorList when using the …
- 11:56 AM Ticket #370 (add multiple navigation slides and column headers) created by
- To increase usability of wizard it would be nice to - put the …
- 11:33 AM Ticket #369 (Pressing enter in Assay step deletes assay) created by
- If I define one assay, and create new assay template, wizard asks for …
- 10:40 AM Ticket #368 (delete assay in SAM gives Grails error) created by
- delete assay in SAM gives Grails error
Mar 16, 2011:
- 6:05 PM Ticket #367 (Subject - event group assignments disappear) reopened by
- might have been related to #364, please retest…
- 6:03 PM Changeset [1638] by
- - resolves #364
- 4:33 PM Ticket #367 (Subject - event group assignments disappear) closed by
- invalid: Hmm can't reproduce this problem myself now anymore. So closing the …
- 4:23 PM Ticket #367 (Subject - event group assignments disappear) created by
- On test.dbnp.org, if I follow these steps: 1. login as 'user' 2. go …
- 1:58 PM Ticket #304 (GSCF Hudson integration tests fail) closed by
- fixed
- 1:17 PM QuickStartServer edited by
- (diff)
- 1:16 PM QuickStartServer edited by
- (diff)
- 1:06 PM QuickStartServer edited by
- (diff)
- 1:05 PM QuickStartServer edited by
- (diff)
- 12:52 PM QuickStartServer edited by
- (diff)
- 12:49 PM QuickStartServer edited by
- (diff)
- 12:44 PM QuickStartServer edited by
- (diff)
- 12:41 PM QuickStartServer edited by
- (diff)
- 12:41 PM QuickStartServer created by
- 11:41 AM QuickStart edited by
- (diff)
- 11:37 AM Changeset [1637] by
- - up to 0.6.6.1 (see #359)
Mar 15, 2011:
- 5:21 PM Ticket #366 (importer does not import all colomns and rows) created by
- importer does not import all colomns and rows.
- 5:15 PM Ticket #365 (date_created and last_undated) created by
- If fields are added to a template an error occurs. Database was …
- 5:11 PM Ticket #364 (delete events does not work) created by
- An event cannot be deleted if it is the last of it's 'kind'. For …
- 5:01 PM Ticket #363 (newly added field in a template are not directly shown) created by
- If a new field is added to a template, it is not shown directly. First …
- 4:59 PM Ticket #362 (add new ontology as template field) created by
- -the field appears very low in the popup window. -if I search for the …
- 4:42 PM Changeset [1636] by
- - gdt to 0.0.25: - template editor blue screen is fixed - 0 values …
- 3:01 PM Ticket #361 (importer: setting a non existant value in a Stringlist does not result ...) created by
- When importing an excel sheet into a template field which is a …
- 2:06 PM Changeset [1635] by
- - added checks to Grom calls if Grom is available so we can uninstall …
- 12:10 PM Changeset [1634] by
- - event templates were not refreshed properly after update (ticket to …
- 11:55 AM Ticket #360 (importer: first page should autodetect sheets after upload and ask the ...) created by
- Currently, the question is always asked which sheet you would like to …
Mar 14, 2011:
- 6:31 PM Ticket #359 (Error when deploying GSCF 0.6.6 test WAR release) created by
- After deploying the GSCF 0.6.6 test WAR release in a fresh Tomcat 5.5 …
- 4:36 PM Changeset [1633] by
- Fixed 'Assay has no value (null)' error in assay exporter
- 3:49 PM Changeset [1632] by
- Fixed 'Assay has no value (null)' error in assay exporter
- 2:55 PM Changeset [1631] by
- Fixed 'Assay has no value (null)' error in assay exporter
- 12:34 PM Ticket #358 (simple wizard gives error when importing 'random' data) created by
- By using the file subjecttest.xls and choosing 'Edit data after …
- 12:22 PM Ticket #357 (Implement Galaxy fetch functionality in GSCF) created by
- Implement a Galaxy plugin that fetches GSCF information via the steps …
- 11:34 AM Ticket #356 (Add extra options for ONTOLOGY template fields to template field ...) created by
- Right now, it's not possible to choose a value for an ONTOLOGY field …
Mar 11, 2011:
- 3:33 PM Changeset [1630] by
- - disabled gmail for dbnp servers
- 3:25 PM Changeset [1629] by
- tagging 0.6.6 release
- 3:06 PM Changeset [1628] by
- - removed obosolete setup wizard - 0.6.6 milestone
- 2:56 PM Ticket #351 (advanced query breaks on number of occasions) closed by
- fixed
- 2:28 PM Ticket #355 (Create usergroups) created by
- In order to give groups of users read or write access to a study. Now, …
- 2:19 PM Ticket #354 (Counting studies is sometimes incorrect) closed by
- fixed
- 2:14 PM Changeset [1627] by
- - deny all access to /query except in development
- 1:42 PM Changeset [1626] by
- - added initial support of a return URI; not working properly though…
- 1:38 PM Ticket #346 (improve fuzzy matching) closed by
- fixed: Solved, tested with a more strict fuzzy matching setting. Now only …
- 12:55 PM Changeset [1625] by
- - improved quicksearch
- 12:47 PM Ticket #339 (improve home page) closed by
- fixed
- 12:43 PM Changeset [1624] by
- - reverted addition of unique() in 1621 as this doubles with the …
- 12:40 PM Changeset [1623] by
- - resolves #354
- 11:51 AM Changeset [1622] by
- Small fix in simple wizard overview
- 11:49 AM Ticket #354 (Counting studies is sometimes incorrect) created by
- The nice graph on the home screen counts the number of studies. But …
- 11:02 AM Changeset [1621] by
- Fixed some bugs in simple wizard and study view page
Mar 10, 2011:
- 4:06 PM Changeset [1620] by
- - gdt to 0.0.23
- 4:03 PM Ticket #323 (Change bluescreen error message into a human readable and professional one) closed by
- fixed
- 3:53 PM Changeset [1619] by
- spinner
- 1:34 PM Changeset [1618] by
- Solved issue #351
- 1:26 PM Ticket #345 (Cloning templates has stopped working) closed by
- fixed: Seems to be working again.
- 1:06 PM Changeset [1617] by
- Bugfix in advanced query
- 12:29 PM Changeset [1616] by
- - commiting a hibernate performance tweak, all still seems to work?
- 11:33 AM Changeset [1615] by
- - fixed cloning of templates (gscf issue #345)
- 11:02 AM Changeset [1614] by
- - fixed indentation
- 9:58 AM Ticket #350 (project is broken!) closed by
- fixed
- 9:55 AM Changeset [1613] by
- Removed some printlns
- 9:54 AM Changeset [1612] by
- Update simple wizard to import subject without a name correctly and …
Mar 9, 2011:
- 10:24 PM Changeset [1611] by
- Improved simple study wizard
- 9:28 PM Changeset [1610] by
- Improved simple import wizard to be able to import events
- 5:28 PM Changeset [1609] by
- Improved simple editing wizard
- 4:31 PM Ticket #353 (Subject species shouldn't be required) created by
- Sometimes sequencing studies are done using product samples or air …
- 3:56 PM Changeset [1608] by
- Fixed bug with hibernate and transactional services in the simple wizard
- 2:57 PM Ticket #352 (Importer creates 12 entities when importing 11) created by
- I just uploaded subjecttest.xls (which has 11 rows) and assigned the …
- 11:21 AM Ticket #351 (advanced query breaks on number of occasions) created by
- When I was yesterday demo-ing the query page on test.nmcdsp.org, the …
- 10:17 AM Changeset [1607] by
- - gdt to 0.0.21, fixed a js issue in the term editor
Mar 8, 2011:
- 7:04 PM Changeset [1606] by
- added import org.codehaus.groovy.grails.plugins.web.taglib.ValidationTagLib?
- 6:30 PM Ticket #350 (project is broken!) created by
- See <http://hudson.nmcdsp.org/hudson/job/GSCF-TEST-DOC/208/changes> …
- 6:04 PM Changeset [1605] by
- commit for Robert: see if webflow works when all logic is moved to …
- 6:01 PM Changeset [1604] by
- Added two flushes so that gscf starts correctly on an empty PostgresQL …
- 5:18 PM Ticket #349 (extend GDT with dynamic addToXXX method for template entities) created by
- Now we have to do study.addToSamples(...) It would be nicer if …
- 5:10 PM Changeset [1603] by
- - importer wizard for studies is instantiating a study from the hidden …
- 4:08 PM Changeset [1602] by
- - improved database upgrade script
- 4:02 PM Changeset [1601] by
- 2:16 PM Changeset [1600] by
- added some debugging lines
- 2:06 PM Changeset [1599] by
- to e or not to e
- 2:00 PM Changeset [1598] by
- and false!
- 1:59 PM Changeset [1597] by
- uncommented try/catch block
- 11:20 AM Ticket #344 (Search form retrieves data from modules using GET) closed by
- fixed: This issue is solved in r1596
- 11:20 AM Changeset [1596] by
- Solved #344 - retrieving module data is now done using POST
- 9:51 AM Ticket #348 (move gdtimporter plugin to a trunk directory) closed by
- fixed: Moved.
Mar 7, 2011:
- 6:33 PM Ticket #329 (Finishing touch after tokens have been refactored) closed by
- fixed: The upgrade method looks good, however it now tries to alter the table …
- 6:31 PM Changeset [1595] by
- - some database upgrade scripts were always being executed, introduced …
- 3:28 PM Changeset [1594] by
- Finishing touch after refactoring entity tokens (#329)
- 3:02 PM Changeset [1593] by
- de-commented: def beforeInterceptor = [action:this.&auth,except:["isUser"]]
- 2:23 PM Changeset [1592] by
- - fb only on prod
- 12:15 PM Ticket #348 (move gdtimporter plugin to a trunk directory) created by
- 12:03 PM Ticket #347 (importer wizard does not check for duplicate identifiers) created by
- When I import subjects with 'Linea subject' template on ci.nmcdsp.org …
- 12:01 PM Changeset [1591] by
- Improved simple wizard so that is can edit studies
- 11:59 AM Ticket #346 (improve fuzzy matching) created by
- Right now, 'Match' in the importer tries to match even if the match is …
- 11:36 AM Ticket #296 (Nice to have: on duplicate identifiers, generate a unique identifier ...) closed by
- duplicate: Duplicate of #249
- 11:28 AM Ticket #343 (Redirect for metabolomics module does not work) closed by
- fixed: This is intentional. Metabolomics studies can be shown by querying on …
- 11:22 AM Ticket #313 (rewrite tests - import test data explicitly) closed by
- fixed: Because bootstrapping at the beginning of each test slows down total …
- 10:29 AM Ticket #336 (make sure all tests succeed) closed by
- fixed
Note: See TracTimeline
for information about the timeline view.
