Timeline
Jan 24, 2011:
- 3:48 PM Changeset [1436] by
- Improved querying, fixed some tests and added imports of the GDT plugin
- 3:32 PM Ticket #285 (Importer stops working after first step) created by
- The importer seems to have completely died after the refactorings and …
- 12:12 PM Changeset [1435] by
- - moved configuration back to grails-app/conf
- 11:50 AM Changeset [1434] by
- - no facebook like in development :)
Jan 22, 2011:
- 5:02 PM Changeset [1433] by
- -fixed duplicate class 'RestControllerTests?' -fixed imports for other …
- 4:07 PM Changeset [1432] by
- Made querying aware of the templates being moved to a plugin. Also …
Jan 21, 2011:
- 9:31 PM Changeset [1431] by
- - fixed the facebook like button
- 9:05 PM Changeset [1430] by
- - set keyword expansion
- 8:56 PM Changeset [1429] by
- - removed libraries which did not seem to be used at all, to cleanup …
- 8:35 PM Changeset [1428] by
- ajaxflow up to 0.1.19 (css fix for webkit browsers)
- 8:25 PM Ticket #280 (Non-active tab buttons don't display correctly in Webkit browsers) closed by
- fixed
- 8:23 PM Changeset [1427] by
- resolved issue #280
- 7:37 PM Changeset [1426] by
- - Resolved part of improvement #225 - refactored the template model …
- 4:37 PM Changeset [1425] by
- Rudimentary assay export functionality
- 4:30 PM Changeset [1424] by
- Improved querying and created a possibility to search for assays
- 1:29 PM Changeset [1423] by
- ajaxflow to 0.1.18 (id support)
Jan 20, 2011:
- 6:32 PM Changeset [1422] by
- - fixed importer issue with the authentication service not being …
- 6:13 PM Changeset [1421] by
- - fixed importer issue with the authentication service not being …
- 5:56 PM Ticket #284 (In importer step 3, the column headers are rendered in a strange way ...) created by
- In step 3 - Mappings - of the importer wizard, if you have invalid …
- 5:41 PM Changeset [1420] by
- - and up to 0.6.4
- 4:28 PM Changeset [1419] by
- - importer title fixed - indentation fixed - all fixed time for drinks
- 4:17 PM Changeset [1418] by
- - enabled authentication in importer
- 4:10 PM Changeset [1417] by
- - did some extreme programming with Tjeerd to fix issues in the …
- 3:42 PM Ticket #279 (Metabolomics module forward login is framed) closed by
- fixed: Was a wrong configuration in the database. It was pointing to a wrong …
- 3:41 PM Ticket #209 (Label / reference of the study in wizard pages) closed by
- fixed
- 11:25 AM Ticket #258 (Module opens in very small frame) reopened by
- Even though I had thought it would be ok, I keep seeing the frame as a …
Jan 19, 2011:
- 4:01 PM Changeset [1416] by
- - again fixed the importer, persisting seemed to work fine, but …
- 2:17 PM Ticket #283 (Study overview shows only 10 studies) created by
- On CI, many studies are present (more than 10). When logged in as …
Jan 18, 2011:
- 8:41 PM Changeset [1415] by
- First version of advanced querying
- 4:38 PM Changeset [1414] by
- - moved the environment specific properties files to src/java to make …
- 4:22 PM Ticket #282 (fileFieldElement stores uploaded files in wide-open directory) created by
- The fileFieldElement allows ajax-upload of a file, but stores the …
- 4:07 PM Changeset [1413] by
- - removed 'tab' logic from importercontroller
- 3:59 PM Changeset [1412] by
- - ajaxflow up to 0.1.17
- 3:51 PM Changeset [1411] by
- - cleaned up importer service and controller (and removed flow …
- 3:51 PM Changeset [1410] by
- - no clickable tabs
- 3:49 PM Changeset [1409] by
- - no clickable tabs
- 3:38 PM Changeset [1408] by
- - refactored grom plugin to be less procedural
- 2:45 PM Ticket #281 (Internationalization - make sure everything is in English) created by
- If gscf is viewed in a Dutch browser, some messages are in Dutch - …
- 1:43 PM Changeset [1407] by
- - fixes an issue with database upgrade script
- 1:12 PM Changeset [1406] by
- - test fix for database upgrade script
- 11:09 AM Changeset [1405] by
- trigger ci
- 10:52 AM Changeset [1404] by
- small fix
- 10:46 AM Changeset [1403] by
- fix recurring issue with TEXT fields
Jan 17, 2011:
- 2:38 PM Ticket #280 (Non-active tab buttons don't display correctly in Webkit browsers) created by
- In chrome and safari the non-active tab buttons don't display …
Jan 14, 2011:
- 10:47 AM Changeset [1402] by
- - minor fix in saveDatamatrix method in ImporterService?, by adding …
- 8:59 AM Ticket #279 (Metabolomics module forward login is framed) created by
- When you login to the GSCF and click on a Metabolomics assay you …
- 8:36 AM Ticket #278 (Allow alternative data/time formatting during import) created by
- When importing date/time information, imported values may not always …
- 8:08 AM Ticket #277 (Simpel Query does not work) created by
- Currently, the simple query (after clicking search study data) does …
- 7:52 AM Ticket #276 (When importing studies that have values that do not match a required ...) created by
- When importing studies that have values that do not match a required …
Jan 13, 2011:
- 6:23 PM Changeset [1401] by
- Tagging3the 0.6.2 release of 3GSCF'
- 6:22 PM Changeset [1400] by
- - and up to 0.6.3!
- 5:31 PM Changeset [1399] by
- forgot class import
- 5:29 PM Changeset [1398] by
- make sure manual adding of ontologies is only done in development and test
- 5:23 PM Changeset [1397] by
- - disable redirect into setup wizard as there is no setup wizard yet
- 3:51 PM Changeset [1396] by
- Tagging the 0.6.2 release of 'GSCF'
- 3:49 PM Changeset [1395] by
- - and we're up to milestone 0.6.2!
- 3:47 PM Changeset [1394] by
- - added JS variable te get rid of warning when wanting to leave the …
- 3:45 PM Ticket #270 (importing subject information gives an error) closed by
- fixed: Seems to work here, might be that some other issues have been solved …
- 3:41 PM Changeset [1393] by
- - fixed typo's
- 3:39 PM Ticket #263 (issue with unsaved data warning with importer) closed by
- fixed
- 3:39 PM Ticket #261 (Importer does not give feedback when initial form left empty) closed by
- fixed: closing issue…
- 3:39 PM Ticket #140 (Error when importing studies that have values that do not match a ...) closed by
- fixed: closing issue…
- 3:21 PM Ticket #267 (only 2011 can be selected) closed by
- fixed: as kees is not closing this issue, i'll do it…
- 3:20 PM Ticket #244 (Importer error after first step) closed by
- fixed: from the text above I assume this is resolved... closing the issue
- 3:19 PM Ticket #241 (validation of study instance show old error massages) closed by
- fixed: this was resolved, but not yet closed... closing issue
- 3:19 PM Ticket #168 (Import Study fails at Step 5: 0 out of 3 rows imported succesfully) closed by
- fixed: from the text above I assume this is resolved... closing the issue
- 3:16 PM Ticket #275 (adding an event to a study results in a hibernate exception: two ...) closed by
- fixed: Resolved in r1391, all study editting seems to work fine now!
- 3:15 PM Changeset [1392] by
- - resolves edit study wizard issues, main ticket #275
- 3:10 PM Changeset [1391] by
- - added slider to mappings step in import wizard
- 1:03 PM Changeset [1390] by
- - quicksave sets the study page to page 7 (done) - set svn ignore
- 12:51 PM Changeset [1389] by
- - adding a simple edit study webtest
- 10:53 AM Changeset [1388] by
- - added popup dialog with warning for first page of importer when not …
- 9:45 AM Changeset [1387] by
- - authentication check added
- 12:32 AM Ticket #268 (field types names in template) closed by
- fixed: Implemented this in [1385] and [1386]
- 12:32 AM Changeset [1386] by
- change which hopefully fixes the first time run errors about …
- 12:24 AM Changeset [1385] by
- changed templatefieldtype descriptions according to #268
Jan 12, 2011:
- 10:00 PM Changeset [1384] by
- added webtest plugin and first (working) webtest, renamed 'test' …
- 5:37 PM Changeset [1383] by
- - removed jquery comment from config.groovy
- 5:35 PM Changeset [1382] by
- - upgraded ajaxflow to 0.1.16 --> grails 1.3.4 support - upgraded …
- 5:29 PM Changeset [1381] by
- - removing cells, concurrentModificationException fixed?
- 5:14 PM Changeset [1380] by
- - removing cells, concurrentModificationException fixed?
- 5:10 PM Changeset [1379] by
- - removing cells, concurrentModificationException fixed?
- 4:59 PM Changeset [1378] by
- - removing cells, concurrentModificationException fixed?
- 4:50 PM Changeset [1377] by
- - removing cells, concurrentModificationException fixed?
- 3:59 PM Changeset [1376] by
- - casting errors are nog being ignored, but are at least logged, …
- 3:26 PM Ticket #275 (adding an event to a study results in a hibernate exception: two ...) created by
- Steps to reproduce (on development): 1. studies -> create a new study …
- 3:19 PM Ticket #272 (error after quicksave events) closed by
- invalid: in order to resolve an issue, we need the stept to reproduce the …
- 3:18 PM Ticket #271 (storing subject info does not work) closed by
- invalid: I cannot do anything with this description... my clue is that this is …
- 3:09 PM Changeset [1375] by
- resolves issue #274
- 2:56 PM Ticket #274 (Height of the warning dialogs in the study wizard is endless) created by
- If you add e.g. 80 Rattus norvegicus using the Rat template in CI, not …
- 2:48 PM Changeset [1374] by
- workaround for #267
- 2:42 PM Changeset [1373] by
- added extra check in sample validation to avoid NPEs in case of broken …
- 2:14 PM Ticket #219 (Move out build scripts and secrets from GSCF repository) closed by
- fixed: Hi robert, I was indeed aware of that particular ticket... but as of …
- 2:13 PM Changeset [1372] by
- - moved debug statement (locally no errors, but on CI gives NPE)
- 2:09 PM Changeset [1371] by
- - moved debug statement (locally no errors, but on CI gives NPE)
- 1:53 PM Changeset [1370] by
- - added debug
- 1:12 PM Ticket #273 (Application breaks after 'module notification' changes) closed by
- fixed: As discussed, this change is automatically changed in the database by …
- 12:52 PM Changeset [1369] by
- - added debug
- 12:12 PM Changeset [1368] by
- - added debug
- 11:50 AM Changeset [1367] by
- - added dialog (based on study wizard) for more detailed information …
Jan 11, 2011:
- 7:18 PM Ticket #259 (synchronization of data between modules and gscf) closed by
- fixed: This change introduced a bug (see #273) which is also fixed. Closing now
- 7:15 PM Changeset [1366] by
- Fixed bug with AssayModule?.notify property (see #269)
- 6:42 PM Ticket #273 (Application breaks after 'module notification' changes) created by
- As of r1356, r1357 the application is unstable: - the study overview …
- 6:36 PM Ticket #269 (description is string not text) closed by
- fixed
- 6:28 PM Ticket #269 (description is string not text) reopened by
- 6:27 PM Ticket #269 (description is string not text) closed by
- fixed: resolved in r1365, assigning to Kees for code review
- 6:26 PM Changeset [1365] by
- - resolves issue #269, performing database upgrade if required (change …
- 6:19 PM Ticket #272 (error after quicksave events) created by
- After including events and quicksaving the data, I get two different …
- 5:57 PM Ticket #271 (storing subject info does not work) created by
- I am trying to store subject information in the diclofenac study …
- 5:38 PM Ticket #270 (importing subject information gives an error) created by
- After trying to inport subject information in the diclofenac study …
- 5:25 PM Changeset [1364] by
- - and another one for issue #219, moved authentication to the …
- 5:21 PM Ticket #269 (description is string not text) created by
- You will get an exception if the description field contains more then …
- 5:04 PM Ticket #268 (field types names in template) created by
- In the template creation the field types should be chosen. From …
- 4:53 PM Ticket #267 (only 2011 can be selected) created by
- If a study is created on ci.nmcdsp.org and a start date is being …
- 4:08 PM Changeset [1363] by
- - and another one for issue #219
- 3:43 PM Changeset [1362] by
- - and another one for issue #219
- 3:33 PM Changeset [1361] by
- - properties were not loaded in a war, trying a different location - #219
- 3:14 PM Changeset [1360] by
- - moving application configuration out of Config.groovy and …
- 2:09 PM Changeset [1359] by
- - setting max height in error dialog
- 1:08 PM Ticket #266 (going back in the importer wizard leads to less choices in fields) created by
- When you use the importer (e.g. with ScenarioEugene), and you go back …
- 12:46 PM Changeset [1358] by
- - fixed study.id error when logged in as new user and trying to import …
- 12:06 PM Ticket #265 (A new user cannot import new studies via importer) created by
- If you create a new user (e.g. via login as admin and then create …
Jan 10, 2011:
- 4:44 PM Changeset [1357] by
- Implemented module notification when a study changes (#259)
- 12:27 PM Ticket #258 (Module opens in very small frame) closed by
- wontfix
- 11:39 AM WikiStart edited by
- (diff)
- 11:39 AM WikiStart edited by
- (diff)
- 11:38 AM WikiStart edited by
- (diff)
- 11:38 AM WikiStart edited by
- (diff)
- 11:37 AM WikiStart edited by
- (diff)
- 11:36 AM WikiStart edited by
- (diff)
- 11:12 AM Ticket #254 (Edit wizard stops working after some time with Javassist errors) closed by
- fixed: This seems to be solved now by [1350]. Closing this as after some …
- 11:00 AM Ticket #212 (search on PubMed ID) closed by
- fixed: Fixed in latest revision r1356
- 10:58 AM Changeset [1356] by
- Fixed message in #212
- 10:58 AM Ticket #210 (option to copy event template fields) closed by
- fixed: tested, works
Jan 9, 2011:
- 2:18 PM Changeset [1355] by
- Automated continuous integration commit of minified JS/CSS
- 1:53 PM Changeset [1354] by
- Automated continuous integration commit of minified JS/CSS
Jan 7, 2011:
- 7:05 PM Ticket #264 (After importing samples into a study the Sample step in the wizard is ...) created by
- If you create a new study, import Samples afterwards (which then don't …
- 6:44 PM Ticket #263 (issue with unsaved data warning with importer) created by
- When I'm done with the importer wizard, I constantly get the warning …
- 6:12 PM Changeset [1353] by
- - fixed some issues with ajaxbuttons that were still left unworking …
- 4:51 PM Changeset [1352] by
- - removed the 'wait for save page' as this is already being handled by …
- 4:43 PM Ticket #262 (When logged in as 'admin' on CI, the 'all studies' does not contain ...) created by
- The 'all studies' page should of course be a superset of 'my studies' …
- 4:38 PM Ticket #261 (Importer does not give feedback when initial form left empty) created by
- When you open the importer ( http://localhost:8080/gscf/importer or …
- 4:10 PM Changeset [1351] by
- - fix for Javassist issue #254, needs some thorough testing…
- 4:09 PM Changeset [1350] by
- - fix for Javassist issue #254, needs some thorough testing…
- 4:08 PM Changeset [1349] by
- - fix for Javassist issue #254, needs some thorough testing…
- 2:05 PM Changeset [1348] by
- - fix for Javassist issue #254, needs some thorough testing…
- 1:46 PM Changeset [1347] by
- - disabled loglevel info
- 9:22 AM Changeset [1346] by
- Added a timer to the Filters to monitor the load of controller/view
- 12:11 AM Changeset [1345] by
- Automated continuous integration commit of minified JS/CSS
- 12:10 AM Changeset [1344] by
- - changed the default spinner to an online spinner image
Jan 6, 2011:
- 11:54 PM Changeset [1343] by
- - updated documentation
- 11:46 PM Changeset [1342] by
- - updated documentation
- 5:33 PM Changeset [1341] by
- fix for development environment to circumvent BioPortal? problems
- 2:03 PM Ticket #260 (in Safari the publication and people buttons are not styled properly ...) created by
- The issue does not happen in Firefox / Chrome, so it looks like it's a …
- 10:15 AM Ticket #245 (Add spinner or 'please wait' when waiting for ajax calls in create ...) closed by
- fixed: It's better now
Jan 5, 2011:
- 5:35 PM Changeset [1340] by
- - upgraded to ajaxflow 0.1.14 (bugfixes)
- 3:10 PM Changeset [1339] by
- - fixed spelling error - removed validation in 'add subject' logic as …
- 2:49 PM Changeset [1338] by
- - must --> moet een
- 2:48 PM Changeset [1337] by
- - moest --> moet
- 2:04 PM Changeset [1336] by
- - importer used wizard.css instead of new studywizard.css
- 1:53 PM Changeset [1335] by
- - added baseUrl variable to the add/modify... templateEditor selector …
- 1:43 PM Changeset [1334] by
- - added 'please wait' functionality to importer
- 1:31 PM Changeset [1333] by
- - updating to ajaxflow 0.1.12 - changed 'please wait' behaviour …
- 11:00 AM Changeset [1332] by
- - fixed entity URL-decoding when importing the file
- 10:55 AM Changeset [1331] by
- - fixed entity selection by adding URL-encoding and decoding to the …
- 10:34 AM Changeset [1330] by
- - temporary fix for jquery 1.4.4
Jan 4, 2011:
- 1:53 PM Changeset [1329] by
- - upgraded jquery to 1.4.4 - upgraded jquery-ui to 1.8.7 - upgraded …
- 11:13 AM Changeset [1328] by
- Added metagenomics module and improved rest controller to give 404 and …
Jan 3, 2011:
- 9:01 AM Ticket #259 (synchronization of data between modules and gscf) created by
- GSCF contains data about studies, assays and samples, and connections …
Dec 31, 2010:
- 2:47 PM Ticket #258 (Module opens in very small frame) created by
- When clicking 'view' no the assay tab of a study, the other module …
Dec 30, 2010:
- 3:55 PM Ticket #257 (Deleting an assay only works after two clicks) created by
- If I want to delete an assay, and click the delete button, nothing …
- 3:43 PM Ticket #256 (Module-select for assays doesn't show the selected value) created by
- When editing a study, you can select a module for an assay. This works …
- 12:50 PM Ticket #255 (entity tokens should be stable) created by
- The studyToken, sampleToken and assayToken can be changed by the user. …
- 10:08 AM Ticket #251 (I cannot store a new study on test.dbnp.org) closed by
- fixed: I found the stack trace. This was caused by [1245]. The description …
- 10:02 AM Changeset [1327] by
- made description field text, see [1245]
- 9:46 AM Ticket #254 (Edit wizard stops working after some time with Javassist errors) created by
- I still experience Javassist errors, almost always if you choose Edit …
Dec 29, 2010:
- 4:39 PM Ticket #253 (I cannot make a new template for the general study information) created by
- Since today (yesterday I made q new template) I cannot make a new …
- 3:55 PM Ticket #252 (log in at two places is confusing) created by
- Having the trac as I-frame in the dbnp.org site, results in having two …
- 3:53 PM Ticket #251 (I cannot store a new study on test.dbnp.org) created by
- On test.dbnp.org quicksave leads to: error: exception → …
Dec 28, 2010:
- 9:15 AM Changeset [1326] by
- - indendation fix
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