Timeline


and

Nov 8, 2010:

5:10 PM Changeset [1101] by m.s.vanvliet@…
Fixed the getSamples REST function. When with a sampleToken it …
4:20 PM Ticket #176 (Unable to map samples for Pilot) created by m.s.vanvliet@…
When trying to map samples via an import I get this: …
3:34 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:27 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:24 PM screenshot_SimpleImportWizard_PropertiesColumns_deel2.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of SimpleImportWizard? Properties/Columns? deel2
3:24 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:19 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:18 PM screenshot_SimpleImportWizard_PropertiesColumns.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of SimpleImportWizard? Properties/Columns?
3:17 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:12 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:10 PM screenshot_SimpleImportWizard_SelectFile.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of SimpleImportWizard? SelectingFile?
3:09 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:02 PM ScenarioEugene edited by e.vansomeren@…
(diff)
3:00 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:56 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:56 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:55 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:53 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:51 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:34 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:20 PM screenshot_NTC_Experiment_test3_deel3.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of NTC Experiment test3 (part3, only right-most columns)
2:19 PM screenshot_NTC_Experiment_test3_deel2.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of NTC Experiment test3 (part2, only mid columns)
2:19 PM screenshot_NTC_Experiment_test3_deel1.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of NTC Experiment test3 (part1, only left-most columns)
2:07 PM ScenarioEugene edited by e.vansomeren@…
(diff)
2:05 PM screenshot_NTCexptest3.PNG attached to ScenarioEugene by e.vansomeren@…
Screenshot of NTC Experiment test3 (only left-most columns)
1:59 PM NTC_Experiment_test3.xls attached to ScenarioEugene by e.vansomeren@…
Three mock NTC studies (from NTC Sharing) that should be importabel
1:55 PM ScenarioEugene created by business@…
12:53 PM Changeset [1100] by s.h.sikkema@…
Fixed 401 error
12:26 PM Changeset [1099] by s.h.sikkema@…
Authentication test
12:16 PM Changeset [1098] by s.h.sikkema@…
AuthenticationService? instantiated
12:08 PM Changeset [1097] by s.h.sikkema@…
A -> a
12:06 PM Changeset [1096] by s.h.sikkema@…
commented out authenticationservice in loadstudy method
10:59 AM Ticket #175 (Move oauth plugin to grails plugins project) created by business@…
10:57 AM Ticket #174 (Move plugins jumpbar and datatables to grails plugins project) created by business@…
10:54 AM Ticket #173 (Update specification of REST methods from modules to GSCF back) created by business@…
10:23 AM Ticket #137 (Error when comparing two studies in v0.5.0) closed by business@…
fixed
10:23 AM Ticket #133 (Implement module assay jump functionality) closed by business@…
fixed
10:21 AM Ticket #132 (Create a study generator page) closed by business@…
fixed
10:17 AM Ticket #131 (add/modify REST method which allows for getting metadata multiple samples) closed by business@…
fixed
10:16 AM Ticket #57 (enhance REST services) closed by business@…
worksforme

Nov 7, 2010:

10:57 PM Changeset [1095] by j.saito@…
Added access to template fields of Event and Subject in getSamples …
10:08 PM Changeset [1094] by j.saito@…
Added TemplateFields? to be returned in getSamples REST resource.

Nov 6, 2010:

4:01 PM Changeset [1093] by t.w.abma@…
- failed cells correction now implemented in an extra step which …

Nov 5, 2010:

9:11 PM Milestone 0.6 completed
Full implementation of Authentication and Authorization. This is a …
9:02 PM Changeset [1092] by m.s.vanvliet@…
Pilot is user-aware adds a memu item Pilot
3:51 PM Changeset [1091] by work@…
- refactored and redesigned search page - bugfixed the build …
1:12 PM Changeset [1090] by s.h.sikkema@…
oops, introduced a typo, now fixed
1:11 PM Changeset [1089] by s.h.sikkema@…
added xbean.jar
12:59 PM Changeset [1088] by s.h.sikkema@…
Upgraded poi xml libs to 3.7
12:43 PM Ticket #136 (Search study data does not work in v0.5.0) closed by business@…
worksforme: This should be fixed now.
11:55 AM Changeset [1087] by s.h.sikkema@…
Added xlsx import functionality

Nov 4, 2010:

5:33 PM Ticket #172 (tables of templates are not correctly shown in IE) created by jildau.bouwman@…
tables that are generated at the subject, event and samples step of …
5:16 PM Changeset [1086] by work@…
- updated apache configuration
5:06 PM Ticket #171 (remove field from template) created by jildau.bouwman@…
Field cannot be removed from a template (even if the field is not used).
5:04 PM Changeset [1085] by work@…
- build info resized to the left
4:53 PM Changeset [1084] by work@…
- and another CSS fix
4:51 PM Ticket #170 (register for new account) created by jildau.bouwman@…
I created a new account, but used a none existing email-adres …
4:49 PM Changeset [1083] by t.w.abma@…
- added logic for cleaning up 'failed cells' in the imported datamatrix
4:46 PM Changeset [1082] by work@…
- IE CSS bugfix
4:37 PM Ticket #169 (log in for view studies) created by jildau.bouwman@…
If you come on the GSCF website in login field is very small. Choosing …
4:28 PM Changeset [1081] by work@…
- updated CI script to support new build information
4:03 PM Changeset [1080] by work@…
- created a generic info template showing build, deploy and uptime …
2:13 PM Changeset [1079] by work@…
- add check tomcat script
12:25 PM Changeset [1078] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
12:23 PM Changeset [1077] by robert@…
Resolved bugs in adding ontology-template-fields to a template. See …
12:00 PM Changeset [1076] by j.a.m.wesbeek@…
- removed grom from removed plugins…
11:58 AM Changeset [1075] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
11:35 AM Changeset [1074] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
11:34 AM Ticket #167 (Wizard sample page does not continue: Cannot invoke method ...) closed by work@…
fixed: Resolved in r1073, please retest on ci instance…
11:33 AM Changeset [1073] by j.a.m.wesbeek@…
- resolves issue #167
11:12 AM Ticket #164 (Exception in create wizard when creating assay but no samples) closed by work@…
duplicate: This issue was also reported as duplicate issue #167, as the latter …
10:59 AM Ticket #158 (Create a remote logout call) closed by m.s.vanvliet@…
fixed
10:55 AM Ticket #148 (Import - Store referrer to continue where you were when going to the ...) closed by m.s.vanvliet@…
fixed
9:42 AM Ticket #168 (Import Study fails at Step 5: 0 out of 3 rows imported succesfully) created by e.vansomeren@…
I've tried to import studies using a simple excel sheet (attached). At …
9:37 AM Ticket #19 (saving new study impossible, navigating stops at tab 6.Samples) closed by work@…
invalid: Eugene, never reopen a ticket which has been resolved unless you are …
9:36 AM Ticket #167 (Wizard sample page does not continue: Cannot invoke method ...) created by work@…
When creating a study in the wizard, the wizard doest not continue to …
9:26 AM Ticket #19 (saving new study impossible, navigating stops at tab 6.Samples) reopened by e.vansomeren@…
A very similar problem occurs again on http://gscf.nmcdsp.org/ the …
12:02 AM Changeset [1072] by j.a.m.wesbeek@…
- disabled plugin debugging, seems like the grom issues have been resolved

Nov 3, 2010:

11:54 PM Changeset [1071] by j.a.m.wesbeek@…
- updated grom plugin to 0.1.15, this should now work properly on …
8:29 PM Changeset [1070] by t.w.abma@…
- ' failed cells' page form with ontology chooser implemented
8:28 PM Changeset [1069] by work@…
- improved grom windows support - updated grom version to 0.1.14 - …
6:57 PM Changeset [1068] by j.a.m.wesbeek@…
- upgraded grom to 0.1.13 (improved growl for windows support)
5:57 PM Changeset [1067] by j.a.m.wesbeek@…
- authentication service was not defined in the loadStudy logic
5:31 PM Changeset [1066] by j.a.m.wesbeek@…
- initialize flash.errors in loadStudy logic
5:04 PM Changeset [1065] by business@…
changed page footer
4:58 PM Changeset [1064] by business@…
downgraded grails version to 1.3.4 to circumvent #147
4:53 PM Changeset [1063] by business@…
removed unnecessary text from home page in production version
4:30 PM Changeset [1062] by business@…
repaired menu item for Assay template editor
4:27 PM Changeset [1061] by business@…
updated ontology tests and deleted tests for REST methods that should …
4:25 PM Ticket #84 (add ontologies chooser to template editor) reopened by business@…
At this point somehow it doesn't work any more. If I want to add an …
3:53 PM Ticket #166 (Automatically match column names to template field names in importer) created by business@…
It would be nice if the importer automatically would match e.g. column …
3:40 PM Ticket #165 (Ability to change user password) created by business@…
Right now I get a password emailed by the registration process, but …
2:59 PM Changeset [1060] by t.w.abma@…
- updated POI library to 3.7 (2010-10-29 release) for handling Excel files
2:51 PM Changeset [1059] by t.w.abma@…
- only show own studies
2:26 PM Ticket #164 (Exception in create wizard when creating assay but no samples) created by business@…
When you specify no samples in the create study wizard, but you do add …
2:05 PM Ticket #163 (After Import Study Data the new studies are not visible) closed by t.w.abma@…
worksforme: This should really be fixed now, the authenticated user is assigned to …
2:03 PM Changeset [1058] by t.w.abma@…
- added failed cells view/logic - fixed Study-owner bug
1:58 PM Changeset [1057] by j.a.m.wesbeek@…
- upgraded grom to 0.1.12 (experimental windows support)
12:58 PM Changeset [1056] by robert@…
Changed template editor to be more user friendly with selecting field …
12:43 PM Ticket #163 (After Import Study Data the new studies are not visible) created by e.vansomeren@…
After importing study data GSCF says that x out of x rows/studies were …
11:45 AM Changeset [1055] by j.a.m.wesbeek@…
- reverted last dev commit…
11:43 AM Changeset [1054] by work@…
- fixed linux support - updated to 0.1.12
10:48 AM Changeset [1053] by robert@…
Fixed a bug in the remote logout call.
9:10 AM Changeset [1052] by adem.bilican@…
error on ExporterController?
8:48 AM Changeset [1051] by adem.bilican@…
error messages in ExporterController? for SimpleTox?

Nov 2, 2010:

4:48 PM Changeset [1050] by t.w.abma@…
- initial "failed cells" logic figured out, now extracts cells from …
3:41 PM Changeset [1049] by m.s.vanvliet@…
Pilot almost there…
2:13 PM Ticket #160 (Grom plugin breaks on tomcat when deployed as a war) closed by work@…
fixed: I have refactored the plugin to not use gant/ant. Because native …
1:24 PM Changeset [1048] by j.a.m.wesbeek@…
- upgraded the grom plugin to 0.1.11, should fix the issues on tomcat
1:11 PM Ticket #162 (Add support for Office Excel 2007 Workbook format (.xlsx) files) created by business@…
Should be as easy as using this import: import …
1:06 PM Ticket #161 (GSCF Documentation) created by business@…
Write user documentation for GSCF, using a simple example study as guide.
11:15 AM Changeset [1047] by t.w.abma@…
- referer for now obtained via redirectTo param in the URL
11:01 AM Ticket #148 (Import - Store referrer to continue where you were when going to the ...) reopened by m.s.vanvliet@…
The Referrer takes me back to STEP5 of the wizard... (before save), …
10:25 AM Changeset [1046] by m.s.vanvliet@…
Update NMC Pilot pages
9:42 AM Changeset [1045] by t.w.abma@…
- temporary removed addition of failed cells to when using …

Nov 1, 2010:

9:42 PM Changeset [1044] by t.w.abma@…
- added record which contains failed columns, should be passed to an …
6:37 PM Changeset [1043] by j.a.m.wesbeek@…
- packaging Gant in the plugin seems to work, however now ant is …
6:30 PM Changeset [1042] by j.a.m.wesbeek@…
- upgraded grom to 0.1.9 to see if this works on tomcat
6:13 PM Changeset [1041] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
6:11 PM Changeset [1040] by j.a.m.wesbeek@…
- made column widths changeable by adding: …
5:14 PM Ticket #135 ([wizard] All data is returned in a random order) closed by work@…
fixed: works for me…
5:10 PM Changeset [1039] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
5:05 PM Changeset [1038] by j.a.m.wesbeek@…
- removed todo from confirmation page
5:04 PM Ticket #153 (Improve confirmation page of wizard) closed by work@…
fixed: improved the confirmation page in r1037
5:03 PM Changeset [1037] by j.a.m.wesbeek@…
- fixed issue #153, improved the confirmation page (removed dummy …
4:49 PM Changeset [1036] by robert@…
Fixed the random order of templates in the study pages (#135) and …
4:38 PM Changeset [1035] by adem.bilican@…
SimpleTox? exporter with file downloading system
4:18 PM Ticket #150 (Implement Sample.parentEventGroup) closed by work@…
fixed: - implemented in svn revision r:1034
4:17 PM Changeset [1034] by j.a.m.wesbeek@…
- implemented improvement #150 ( https://trac.nbic.nl/gscf/ticket/150
4:14 PM Changeset [1033] by j.a.m.wesbeek@…
- developmental and administration menu items are now icons to save …
3:41 PM Changeset [1032] by j.a.m.wesbeek@…
- added the jquery-ui autocomplete html extention to the wizard
2:54 PM Changeset [1031] by robert@…
Bug in study comparison view fixed, so multiple studies can be compared
2:17 PM Changeset [1030] by robert@…
Extra check whether an owner has been added for a study, to prevent a …
1:17 PM Changeset [1029] by robert@…
Compare templates view updated.
12:48 PM Changeset [1028] by t.w.abma@…
- fixed NPE when empty cells were read from Excel and the property, …
12:42 PM Changeset [1027] by robert@…
Implemented compare templates feature and fixed show studies overview …
12:35 PM Ticket #160 (Grom plugin breaks on tomcat when deployed as a war) created by work@…
On tomcat the plugin results in the following error: 2010-11-01 …
11:52 AM Changeset [1026] by j.a.m.wesbeek@…
- changed the CI script so that it works grails independently. This …
11:40 AM Changeset [1025] by j.a.m.wesbeek@…
- forgot to remove one .grom() call…
11:30 AM Changeset [1024] by j.a.m.wesbeek@…
- removed the String.grom() calls as grom is not stable on tomcat: …
11:28 AM Changeset [1023] by j.a.m.wesbeek@…
- uninstall grom in ci build as it currently is unstable on tomcat
11:21 AM Changeset [1022] by j.a.m.wesbeek@…
* grom 0.1.8
10:07 AM Ticket #63 (importing subjects twice does not add information to existing subjects ...) closed by t.w.abma@…
fixed: This should be fixed by now. There is being checked whether the entity …

Oct 29, 2010:

5:52 PM Changeset [1021] by j.a.m.wesbeek@…
- upgraded grom to 0.1.7
5:47 PM Changeset [1020] by j.a.m.wesbeek@…
- upgraded grom to 0.1.6
5:38 PM Changeset [1019] by j.a.m.wesbeek@…
- ci script should not remove the grom plugin as it extends the String …
5:34 PM Changeset [1018] by j.a.m.wesbeek@…
- upgraded grom plugin 0.1.5 as 0.1.4 breaks application on tomcat - …
12:56 PM Changeset [1017] by m.s.vanvliet@…
Fixed JSON Response of getAuthorizationLevel
12:48 PM Changeset [1016] by j.saito@…
Removed minor bug.
12:41 PM Changeset [1015] by j.a.m.wesbeek@…
- updating grom to 0.1.4 (Linux support)
11:15 AM Changeset [1014] by j.saito@…
Refactored AssayModule?.url to AssayModule?.consumer in all parts effected.

Oct 28, 2010:

8:05 PM Changeset [1013] by business@…
changed Ontology ncboId to unique, extended range of fulltext query
7:45 PM Changeset [1012] by j.a.m.wesbeek@…
- upgrading grom plugin to 1.1.3 - using String.grom() in bootstrap - …
5:16 PM Changeset [1011] by j.saito@…
Ticket #57. Unified getStudy and getStudies. Note: Could not get …
4:39 PM Changeset [1010] by j.saito@…
Ticket #57 - Unified getAssays and getAssay. Also, added convenience …
4:29 PM Ticket #159 (Excel exporter) created by business@…
We need to implement the querying functionality as specified in the …
3:48 PM Changeset [1009] by s.h.sikkema@…
now really fixed backlink for jumpbar link
3:07 PM Changeset [1008] by s.h.sikkema@…
Upped jumpbar version and fixed backlink for jumpbar link
2:15 PM Changeset [1007] by j.a.m.wesbeek@…
- updated existing vhosts to reflect changes in domain naming - added …
2:11 PM Ticket #158 (Create a remote logout call) created by m.s.vanvliet@…
At this moment I can Login a user via: …
10:52 AM Ticket #157 (Repair and test simple query wizard) created by business@…
Right now, the simple query wizard doesn't function properly and …
10:51 AM Ticket #156 (Repair full-text search) created by business@…
As of now, the full text search is hidden because it only searches on …

Oct 27, 2010:

6:25 PM Ticket #61 (making a new template by extending an existing one ) closed by robert@…
fixed: I've added a clone template feature yesterday, and that will do the …
5:57 PM Changeset [1006] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
5:56 PM Ticket #149 (termEditor autocomplete recently started escaping span elements in ...) closed by work@…
fixed: Apparently the change to escape HTML was done by design and hence not …
5:55 PM Changeset [1005] by j.a.m.wesbeek@…
resolves #149
4:58 PM Ticket #155 ('Show Studies' page needs to be re-developed) created by work@…
Currently the 'show studies' page is a huge legacy page and a total …
4:58 PM Ticket #80 (mark a whole row (all groups) in a template is not possible) closed by work@…
wontfix: I see what you mean, assigning one treatment to multiple groups at …
4:45 PM Ticket #64 (import wizard not accessible via create/edit study) closed by work@…
worksforme
4:45 PM Ticket #154 (Enhance template editor template field type chooser) created by business@…
Right now, the template field type chooser in the template editor …
4:39 PM Ticket #153 (Improve confirmation page of wizard) created by business@…
On the confirmation page of the study create wizard, there are some …
4:38 PM Ticket #58 (template cannot be added or modified) closed by work@…
duplicate: duplicate to #60
4:34 PM Ticket #152 (clarify sample generation / adjust column widths in study create/edit ...) created by business@…
In the study create/edit wizard, when the samples are generated, it's …
4:15 PM Ticket #65 (DOB subjects with stringlist only from the year 2000 on and later) closed by work@…
fixed: Resolved in #1003. It now shows -80 and +20 years relative to the …
4:15 PM Changeset [1004] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:13 PM Changeset [1003] by j.a.m.wesbeek@…
resolves #65, datetime picker showing only -10 + 10 years in select
4:04 PM Ticket #151 (Database administration) created by business@…
At the moment, any user that obtains a login is able to add new …
3:50 PM Changeset [1002] by t.w.abma@…
- added functionality to check for existing entities when importing …
3:29 PM Changeset [1001] by j.saito@…
Ticket 57. Merged getSample and getSamples into one REST resource. …
2:54 PM Ticket #127 (take into account ontology versioning, make more use of Ontocat) reopened by business@…
2:38 PM Changeset [1000] by adem.bilican@…
first version for a SimpleTox? Exporter : go to Studies > Export as …
2:27 PM Ticket #140 (Error when importing studies that have values that do not match a ...) reopened by business@…
Eugene to Tjeerd (in Dutch): "Bedankt voor je aandacht aan dit …
12:21 PM Changeset [999] by t.w.abma@…
- fixed constraint violation error by adding parent to the entities
9:55 AM Ticket #150 (Implement Sample.parentEventGroup) created by business@…
Store Sample.parentEventGroup (add as nullable property to domain …

Oct 26, 2010:

5:08 PM Ticket #149 (termEditor autocomplete recently started escaping span elements in ...) created by work@…
probably related to the recent upgrade of the jquery plugin and the …
5:03 PM Changeset [998] by j.a.m.wesbeek@…
- removed the identifiers from the wizard views
4:35 PM Ticket #127 (take into account ontology versioning, make more use of Ontocat) closed by work@…
fixed: Resolved in svn #997. Resolution: before adding a new ontology, a …
4:33 PM Changeset [997] by j.a.m.wesbeek@…
- resolved issue #127 ( https://trac.nbic.nl/gscf/ticket/127 ): new …
3:19 PM Changeset [996] by robert@…
Implemented clone feature in template editor (ticket #6), added a rest …
3:03 PM Ticket #6 (clone feature) closed by robert@…
fixed: Clone feature is added to the original template editor, and the …
2:53 PM Changeset [995] by s.h.sikkema@…
Added jumpbar again
2:47 PM Changeset [994] by s.h.sikkema@…
Removed extra view table cell from assay table
2:38 PM Ticket #140 (Error when importing studies that have values that do not match a ...) closed by t.w.abma@…
fixed: Fixed this exception which came when trying to import data which …
2:36 PM Changeset [993] by t.w.abma@…
- fixed exception which came when trying to import data which cannot …
1:20 PM Ticket #14 ((re)ordering template fields doesn't work perfect) closed by robert@…
fixed: #1 was a bug, that's fixed. #2 was because the fields are reordered …
12:54 PM Changeset [992] by j.a.m.wesbeek@…
- removed logfile - set all logfiles to ignore
12:44 PM Ticket #79 (preview of columns in simple import wizard) closed by t.w.abma@…
fixed: Old ticket, but this was implemented already a while ago. At least …
11:46 AM Ticket #118 (Implement Authorization and Authentication) closed by robert@…
fixed: THis is added to the trunk. The authentication is done without oauth …
11:31 AM Ticket #148 (Import - Store referrer to continue where you were when going to the ...) closed by t.w.abma@…
fixed: First call of the importer the referrer is stored in a session and in …

Oct 25, 2010:

5:25 PM Ticket #36 (naming groups on template impossible) closed by business@…
fixed
5:21 PM Ticket #146 (Presentation mode of dbnp.org misses information on page 2 and 3) closed by business@…
fixed: This is now solved.
5:08 PM Ticket #145 (Running GSCF demo as frame inside http://dbnp.org causes inconvenient ...) closed by business@…
fixed: Solved by putting a direct link to the demo on dbnp.org.
5:04 PM Ticket #142 (Edit/create study template should be available directly from main menu) closed by business@…
duplicate: Duplicate of #7
4:32 PM Changeset [991] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:30 PM Changeset [990] by robert@…
Fixed bug #21: error when adding a person to a study without selecting …
4:29 PM Ticket #21 (adding a contact without selecting a role seems possible, but results ...) closed by robert@…
fixed: The script now checks whether a person and a role have been selected …
4:29 PM Changeset [989] by t.w.abma@…
- added referer to the last step of the wizard
4:25 PM Changeset [988] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:23 PM Changeset [987] by robert@…
Fixed bug #15
4:21 PM Ticket #15 (not possible to fill in affiliations) closed by robert@…
fixed: I've added a link to the 'affiliation-manager-screen' to - the screen …
4:07 PM Ticket #95 (ApoE3Leiden muis is niet in de strain ontology) closed by business@…
worksforme: Gebruik de Black Six strain en specificeer ApoE3Leiden by Genotype …
4:07 PM Ticket #50 (storing TEXT fields does not work in production environment) closed by business@…
This depends on http://jira.codehaus.org/browse/GRAILS-6754 being …
3:56 PM Changeset [986] by robert@…
Added plugin famfamfam again
3:28 PM Changeset [985] by robert@…
Removed spring-security-ui plugin to decrease dependencies. The …
12:46 PM Ticket #148 (Import - Store referrer to continue where you were when going to the ...) created by m.s.vanvliet@…
Can you make the importer to redirect to the place where you left of …

Oct 22, 2010:

4:52 PM Changeset [984] by robert@…
Using the login panel for logging in, instead of the ugly …
4:18 PM Changeset [983] by robert@…
New type of authentication and authorization added to the rest …
2:27 PM Ticket #98 (selecting multiple subjects in study create wizard works very bad) closed by j.a.m.wesbeek@…
worksforme
1:25 PM Changeset [982] by business@…
updated study show to also display parent event and subject of a sample
1:14 PM Changeset [981] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
1:12 PM Changeset [980] by j.a.m.wesbeek@…
- rewrote the css, javascript and views to use the famfamfam plugin …
12:38 PM Changeset [979] by j.a.m.wesbeek@…
- again remove nadd-neutralizer - reverted the jquery downgrade caused …
12:19 PM Changeset [978] by j.a.m.wesbeek@…
- fixed indentation

Oct 21, 2010:

6:52 PM Ticket #147 (Edit study wizard doesn't work anymore) created by business@…
Since Grails 1.3.5, the edit study wizard stops functioning after the …
5:30 PM Changeset [977] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
5:28 PM Changeset [976] by robert@…
Authentication and authorization for studies is added, according to …
4:53 PM Changeset [975] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:51 PM Changeset [974] by j.a.m.wesbeek@…
- removed the 'required' keyword from the Study's domainFields for the …
4:42 PM Changeset [973] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:40 PM Ticket #146 (Presentation mode of dbnp.org misses information on page 2 and 3) created by e.vansomeren@…
On the dbno.org site, home page a link is available: "Also available …
4:40 PM Changeset [972] by j.a.m.wesbeek@…
- and hibernate and tomcat were also wrong version - added revision …
4:39 PM Changeset [971] by s.h.sikkema@…
Included jumpbar plugin again
4:36 PM Changeset [970] by j.a.m.wesbeek@…
- version was changed to 1.3.4, changed it back to grails 1.3.5
4:35 PM Ticket #145 (Running GSCF demo as frame inside http://dbnp.org causes inconvenient ...) created by e.vansomeren@…
When on dbnp.org and clicking demo, GSCF is run as a frame inside …
4:35 PM Changeset [969] by j.a.m.wesbeek@…
- changed feedback behaviour - added a beta image
4:28 PM Ticket #144 (Improve GSCF to work with large numbers (e.g. searchboxes instead of ...) created by e.vansomeren@…
Dropdown of contacts will be problematic when there are > 50 contacts …
4:23 PM Changeset [968] by s.h.sikkema@…
Included jumpbar plugin
4:23 PM Ticket #143 (Import Contacts) created by e.vansomeren@…
Besides study data, it would be very convenient to allow the import of …
4:18 PM Ticket #142 (Edit/create study template should be available directly from main menu) created by e.vansomeren@…
Currently you can only edit/create a study template when …
4:13 PM Changeset [967] by business@…
added Study 'published' field to domainFields
4:12 PM Ticket #141 (Explain prefix for creating contacts) created by e.vansomeren@…
The term prefix is not always clear. Please give hint, e.g. "van" in …
4:09 PM Ticket #140 (Error when importing studies that have values that do not match a ...) created by e.vansomeren@…
I've created the NTC study template 2 that contains a field "Sample …
4:00 PM Ticket #139 (When importing only information about the study itself using simple ...) created by e.vansomeren@…
When importing only information about the study itself using simple …
3:59 PM Ticket #138 (Implement study quality criteria for publication) created by business@…
A study should only be published if it meets certain criteria: * It …
3:54 PM Changeset [966] by business@…
also added assays check in Study.deleteEventGroup, added test to check …
3:51 PM Ticket #137 (Error when comparing two studies in v0.5.0) created by e.vansomeren@…
When viewing studies. Select first two studies and press "compare …
3:44 PM Ticket #136 (Search study data does not work in v0.5.0) created by e.vansomeren@…
Searching for studies doesn't work. For example, "PPS" results in no …
3:38 PM Changeset [965] by business@…
fix Study.deleteEventGroup to correctly delete samples (still TODO: …
3:04 PM Changeset [964] by business@…
changed SampleTests? to comply with parentEvent being nullable, delete …
2:49 PM Changeset [963] by business@…
added parentStudyToken to getAssay REST call
1:17 PM Changeset [962] by j.a.m.wesbeek@…
- assay page in the wizard did not properly displayed the required …
12:42 PM Changeset [961] by t.w.abma@…
- removed Entity references completely and removed display of members …
12:24 PM Changeset [960] by business@…
changed parentEvent in Sample to nullable. Please make sure that any …

Oct 20, 2010:

9:13 PM Changeset [959] by j.a.m.wesbeek@…
- set keyword expansion
8:45 PM Changeset [958] by root
test for properties
7:14 PM Changeset [957] by j.a.m.wesbeek@…
- fixed the continuous integration script which was broken on previous …
6:30 PM Changeset [956] by j.a.m.wesbeek@…
- added jquery-ui 1.8.5 css / images
6:29 PM Changeset [955] by j.a.m.wesbeek@…
- removed jquery-ui 1.8.2 css / images
6:27 PM Changeset [954] by j.a.m.wesbeek@…
- upgraded webflow plugin - upgraded jquery - removed jquery-ui 1.8.2 …
6:16 PM Ticket #125 (Issue warning when no events are assigned to EventGroups or samples to ...) closed by j.a.m.wesbeek@…
fixed: resolved in svn #953, added a warning page to the wizard whenever a …
6:16 PM Changeset [953] by j.a.m.wesbeek@…
- resolved issue #125 ( https://trac.nbic.nl/gscf/ticket/125 ); …
5:39 PM Changeset [952] by j.a.m.wesbeek@…
- fixed references to handleSamples() which should have been samplePage()
5:30 PM Ticket #124 (add new events to a stored study does not work) closed by j.a.m.wesbeek@…
duplicate: duplicate to #2
5:25 PM Ticket #135 ([wizard] All data is returned in a random order) created by j.a.m.wesbeek@…
Currently, all data on pages is randomized. For example, subjects, …
5:22 PM Ticket #123 (order of samples in assay tab) closed by j.a.m.wesbeek@…
wontfix: currently everything is randomized in the wizard pages, so this is not …
4:51 PM Ticket #2 (new sample events are not added to sample list) closed by j.a.m.wesbeek@…
fixed: resolved in svn #951 Samples were generated once upon entering the …
4:48 PM Changeset [951] by j.a.m.wesbeek@…
- resolved #2 (https://trac.nbic.nl/gscf/ticket/2): "new samples are …
3:54 PM Changeset [950] by j.a.m.wesbeek@…
- Tjeerd change broke the wizard, reverted... (should probably work …
12:20 PM Changeset [949] by j.a.m.wesbeek@…
- removed nadd-neutralizer - added grom-1.1.2

Oct 19, 2010:

4:06 PM Ticket #20 (save of subjects does not work) closed by business@…
2:19 PM Changeset [948] by business@…
corrected errors introduced in #944, metabolomics module in …
11:55 AM Changeset [947] by m.s.vanvliet@…
Initial NMC-DSP/GSCF Pilot page
11:36 AM Ticket #107 (Adjust validate() in TemplateEntity to also check template field value ...) closed by business@…
fixed
10:44 AM WikiStart edited by business@…
(diff)
10:43 AM WikiStart edited by business@…
(diff)
10:03 AM Ticket #134 (Convenience URLs to expose to modules - e.g. importing samples for a ...) created by business@…
To make it more easy for modules to link directly to for example the …

Oct 18, 2010:

5:54 PM Ticket #133 (Implement module assay jump functionality) created by business@…
In the study/show code, in the Assays tab, update the link to work …
4:39 PM Ticket #132 (Create a study generator page) created by business@…
Insert a new menu item in GSCF under Studies: 'Generate new studies'. …
3:44 PM Ticket #131 (add/modify REST method which allows for getting metadata multiple samples) created by business@…
Currently, for getting information about samples, there only exist two …
2:43 PM Changeset [946] by j.a.m.wesbeek@…
* upgraded project to Grails 1.3.5

Oct 14, 2010:

7:57 PM Changeset [945] by j.saito@…
Sorted out sources for null-pointer exceptions.
6:06 PM Ticket #130 (SimpleTox exporter) created by business@…
We need a SimpleTox? exporter to get metadata into ArrayTrack?. This is …
5:44 PM Changeset [944] by j.saito@…
Slightly modified Bootstrap for TEST_ENV.
4:34 PM Changeset [943] by t.w.abma@…
- new version of AAA-plugin
1:06 PM Changeset [942] by business@…
added a showByToken for assays, updated generated assay view
12:23 PM Changeset [941] by business@…
added a showByToken action to the study controller
11:05 AM Ticket #129 (Javascript error) created by business@…
JavaScript? error on the nbx3 instance in study/show/25 if you go to …

Oct 13, 2010:

3:43 PM Ticket #128 (exception after defining a study, cannot save the study) created by business@…
When creating a study with some generated samples, a popup box is …
3:40 PM Ticket #127 (take into account ontology versioning, make more use of Ontocat) created by business@…
Problem that originally raised versioning: When I click add more... to …
3:37 PM Ticket #126 (exception after importing subjects sheet) created by business@…
After importing the example subjects sheet, I got an error: …

Oct 12, 2010:

4:17 PM Changeset [940] by t.w.abma@…
- REST-controller should return correct authorization level back
12:19 PM Changeset [939] by t.w.abma@…
- added SpringSecurity? 'admin' and 'test' user to the bootstrap
12:11 PM Changeset [938] by t.w.abma@…
- GSCF working with AAAA-plugin, removed Melody-plugin which gave …
11:22 AM Changeset [937] by t.w.abma@…
- fixed (hopefully) integrity contraints error

Oct 11, 2010:

10:23 PM Changeset [936] by t.w.abma@…
- Nimble removed, AAAA-plugin installed (based on Spring Security), …
12:48 PM Changeset [935] by j.saito@…
Added dummy REST resource for getAuthorizationLevel.
Note: See TracTimeline for information about the timeline view.