Timeline


and

Oct 26, 2010:

5:08 PM Ticket #149 (termEditor autocomplete recently started escaping span elements in ...) created by work@…
probably related to the recent upgrade of the jquery plugin and the …
5:03 PM Changeset [998] by j.a.m.wesbeek@…
- removed the identifiers from the wizard views
4:35 PM Ticket #127 (take into account ontology versioning, make more use of Ontocat) closed by work@…
fixed: Resolved in svn #997. Resolution: before adding a new ontology, a …
4:33 PM Changeset [997] by j.a.m.wesbeek@…
- resolved issue #127 ( https://trac.nbic.nl/gscf/ticket/127 ): new …
3:19 PM Changeset [996] by robert@…
Implemented clone feature in template editor (ticket #6), added a rest …
3:03 PM Ticket #6 (clone feature) closed by robert@…
fixed: Clone feature is added to the original template editor, and the …
2:53 PM Changeset [995] by s.h.sikkema@…
Added jumpbar again
2:47 PM Changeset [994] by s.h.sikkema@…
Removed extra view table cell from assay table
2:38 PM Ticket #140 (Error when importing studies that have values that do not match a ...) closed by t.w.abma@…
fixed: Fixed this exception which came when trying to import data which …
2:36 PM Changeset [993] by t.w.abma@…
- fixed exception which came when trying to import data which cannot …
1:20 PM Ticket #14 ((re)ordering template fields doesn't work perfect) closed by robert@…
fixed: #1 was a bug, that's fixed. #2 was because the fields are reordered …
12:54 PM Changeset [992] by j.a.m.wesbeek@…
- removed logfile - set all logfiles to ignore
12:44 PM Ticket #79 (preview of columns in simple import wizard) closed by t.w.abma@…
fixed: Old ticket, but this was implemented already a while ago. At least …
11:46 AM Ticket #118 (Implement Authorization and Authentication) closed by robert@…
fixed: THis is added to the trunk. The authentication is done without oauth …
11:31 AM Ticket #148 (Import - Store referrer to continue where you were when going to the ...) closed by t.w.abma@…
fixed: First call of the importer the referrer is stored in a session and in …

Oct 25, 2010:

5:25 PM Ticket #36 (naming groups on template impossible) closed by business@…
fixed
5:21 PM Ticket #146 (Presentation mode of dbnp.org misses information on page 2 and 3) closed by business@…
fixed: This is now solved.
5:08 PM Ticket #145 (Running GSCF demo as frame inside http://dbnp.org causes inconvenient ...) closed by business@…
fixed: Solved by putting a direct link to the demo on dbnp.org.
5:04 PM Ticket #142 (Edit/create study template should be available directly from main menu) closed by business@…
duplicate: Duplicate of #7
4:32 PM Changeset [991] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:30 PM Changeset [990] by robert@…
Fixed bug #21: error when adding a person to a study without selecting …
4:29 PM Ticket #21 (adding a contact without selecting a role seems possible, but results ...) closed by robert@…
fixed: The script now checks whether a person and a role have been selected …
4:29 PM Changeset [989] by t.w.abma@…
- added referer to the last step of the wizard
4:25 PM Changeset [988] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:23 PM Changeset [987] by robert@…
Fixed bug #15
4:21 PM Ticket #15 (not possible to fill in affiliations) closed by robert@…
fixed: I've added a link to the 'affiliation-manager-screen' to - the screen …
4:07 PM Ticket #95 (ApoE3Leiden muis is niet in de strain ontology) closed by business@…
worksforme: Gebruik de Black Six strain en specificeer ApoE3Leiden by Genotype …
4:07 PM Ticket #50 (storing TEXT fields does not work in production environment) closed by business@…
This depends on http://jira.codehaus.org/browse/GRAILS-6754 being …
3:56 PM Changeset [986] by robert@…
Added plugin famfamfam again
3:28 PM Changeset [985] by robert@…
Removed spring-security-ui plugin to decrease dependencies. The …
12:46 PM Ticket #148 (Import - Store referrer to continue where you were when going to the ...) created by m.s.vanvliet@…
Can you make the importer to redirect to the place where you left of …

Oct 22, 2010:

4:52 PM Changeset [984] by robert@…
Using the login panel for logging in, instead of the ugly …
4:18 PM Changeset [983] by robert@…
New type of authentication and authorization added to the rest …
2:27 PM Ticket #98 (selecting multiple subjects in study create wizard works very bad) closed by j.a.m.wesbeek@…
worksforme
1:25 PM Changeset [982] by business@…
updated study show to also display parent event and subject of a sample
1:14 PM Changeset [981] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
1:12 PM Changeset [980] by j.a.m.wesbeek@…
- rewrote the css, javascript and views to use the famfamfam plugin …
12:38 PM Changeset [979] by j.a.m.wesbeek@…
- again remove nadd-neutralizer - reverted the jquery downgrade caused …
12:19 PM Changeset [978] by j.a.m.wesbeek@…
- fixed indentation

Oct 21, 2010:

6:52 PM Ticket #147 (Edit study wizard doesn't work anymore) created by business@…
Since Grails 1.3.5, the edit study wizard stops functioning after the …
5:30 PM Changeset [977] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
5:28 PM Changeset [976] by robert@…
Authentication and authorization for studies is added, according to …
4:53 PM Changeset [975] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:51 PM Changeset [974] by j.a.m.wesbeek@…
- removed the 'required' keyword from the Study's domainFields for the …
4:42 PM Changeset [973] by j.a.m.wesbeek@…
Automated continuous integration commit of minified JS/CSS
4:40 PM Ticket #146 (Presentation mode of dbnp.org misses information on page 2 and 3) created by e.vansomeren@…
On the dbno.org site, home page a link is available: "Also available …
4:40 PM Changeset [972] by j.a.m.wesbeek@…
- and hibernate and tomcat were also wrong version - added revision …
4:39 PM Changeset [971] by s.h.sikkema@…
Included jumpbar plugin again
4:36 PM Changeset [970] by j.a.m.wesbeek@…
- version was changed to 1.3.4, changed it back to grails 1.3.5
4:35 PM Ticket #145 (Running GSCF demo as frame inside http://dbnp.org causes inconvenient ...) created by e.vansomeren@…
When on dbnp.org and clicking demo, GSCF is run as a frame inside …
4:35 PM Changeset [969] by j.a.m.wesbeek@…
- changed feedback behaviour - added a beta image
4:28 PM Ticket #144 (Improve GSCF to work with large numbers (e.g. searchboxes instead of ...) created by e.vansomeren@…
Dropdown of contacts will be problematic when there are > 50 contacts …
4:23 PM Changeset [968] by s.h.sikkema@…
Included jumpbar plugin
4:23 PM Ticket #143 (Import Contacts) created by e.vansomeren@…
Besides study data, it would be very convenient to allow the import of …
4:18 PM Ticket #142 (Edit/create study template should be available directly from main menu) created by e.vansomeren@…
Currently you can only edit/create a study template when …
4:13 PM Changeset [967] by business@…
added Study 'published' field to domainFields
4:12 PM Ticket #141 (Explain prefix for creating contacts) created by e.vansomeren@…
The term prefix is not always clear. Please give hint, e.g. "van" in …
4:09 PM Ticket #140 (Error when importing studies that have values that do not match a ...) created by e.vansomeren@…
I've created the NTC study template 2 that contains a field "Sample …
4:00 PM Ticket #139 (When importing only information about the study itself using simple ...) created by e.vansomeren@…
When importing only information about the study itself using simple …
3:59 PM Ticket #138 (Implement study quality criteria for publication) created by business@…
A study should only be published if it meets certain criteria: * It …
3:54 PM Changeset [966] by business@…
also added assays check in Study.deleteEventGroup, added test to check …
3:51 PM Ticket #137 (Error when comparing two studies in v0.5.0) created by e.vansomeren@…
When viewing studies. Select first two studies and press "compare …
3:44 PM Ticket #136 (Search study data does not work in v0.5.0) created by e.vansomeren@…
Searching for studies doesn't work. For example, "PPS" results in no …
3:38 PM Changeset [965] by business@…
fix Study.deleteEventGroup to correctly delete samples (still TODO: …
3:04 PM Changeset [964] by business@…
changed SampleTests? to comply with parentEvent being nullable, delete …
2:49 PM Changeset [963] by business@…
added parentStudyToken to getAssay REST call
1:17 PM Changeset [962] by j.a.m.wesbeek@…
- assay page in the wizard did not properly displayed the required …
12:42 PM Changeset [961] by t.w.abma@…
- removed Entity references completely and removed display of members …
12:24 PM Changeset [960] by business@…
changed parentEvent in Sample to nullable. Please make sure that any …

Oct 20, 2010:

9:13 PM Changeset [959] by j.a.m.wesbeek@…
- set keyword expansion
8:45 PM Changeset [958] by root
test for properties
7:14 PM Changeset [957] by j.a.m.wesbeek@…
- fixed the continuous integration script which was broken on previous …
6:30 PM Changeset [956] by j.a.m.wesbeek@…
- added jquery-ui 1.8.5 css / images
6:29 PM Changeset [955] by j.a.m.wesbeek@…
- removed jquery-ui 1.8.2 css / images
6:27 PM Changeset [954] by j.a.m.wesbeek@…
- upgraded webflow plugin - upgraded jquery - removed jquery-ui 1.8.2 …
6:16 PM Ticket #125 (Issue warning when no events are assigned to EventGroups or samples to ...) closed by j.a.m.wesbeek@…
fixed: resolved in svn #953, added a warning page to the wizard whenever a …
6:16 PM Changeset [953] by j.a.m.wesbeek@…
- resolved issue #125 ( https://trac.nbic.nl/gscf/ticket/125 ); …
5:39 PM Changeset [952] by j.a.m.wesbeek@…
- fixed references to handleSamples() which should have been samplePage()
5:30 PM Ticket #124 (add new events to a stored study does not work) closed by j.a.m.wesbeek@…
duplicate: duplicate to #2
5:25 PM Ticket #135 ([wizard] All data is returned in a random order) created by j.a.m.wesbeek@…
Currently, all data on pages is randomized. For example, subjects, …
5:22 PM Ticket #123 (order of samples in assay tab) closed by j.a.m.wesbeek@…
wontfix: currently everything is randomized in the wizard pages, so this is not …
4:51 PM Ticket #2 (new sample events are not added to sample list) closed by j.a.m.wesbeek@…
fixed: resolved in svn #951 Samples were generated once upon entering the …
4:48 PM Changeset [951] by j.a.m.wesbeek@…
- resolved #2 (https://trac.nbic.nl/gscf/ticket/2): "new samples are …
3:54 PM Changeset [950] by j.a.m.wesbeek@…
- Tjeerd change broke the wizard, reverted... (should probably work …
12:20 PM Changeset [949] by j.a.m.wesbeek@…
- removed nadd-neutralizer - added grom-1.1.2

Oct 19, 2010:

4:06 PM Ticket #20 (save of subjects does not work) closed by business@…
2:19 PM Changeset [948] by business@…
corrected errors introduced in #944, metabolomics module in …
11:55 AM Changeset [947] by m.s.vanvliet@…
Initial NMC-DSP/GSCF Pilot page
11:36 AM Ticket #107 (Adjust validate() in TemplateEntity to also check template field value ...) closed by business@…
fixed
10:44 AM WikiStart edited by business@…
(diff)
10:43 AM WikiStart edited by business@…
(diff)
10:03 AM Ticket #134 (Convenience URLs to expose to modules - e.g. importing samples for a ...) created by business@…
To make it more easy for modules to link directly to for example the …

Oct 18, 2010:

5:54 PM Ticket #133 (Implement module assay jump functionality) created by business@…
In the study/show code, in the Assays tab, update the link to work …
4:39 PM Ticket #132 (Create a study generator page) created by business@…
Insert a new menu item in GSCF under Studies: 'Generate new studies'. …
3:44 PM Ticket #131 (add/modify REST method which allows for getting metadata multiple samples) created by business@…
Currently, for getting information about samples, there only exist two …
2:43 PM Changeset [946] by j.a.m.wesbeek@…
* upgraded project to Grails 1.3.5

Oct 14, 2010:

7:57 PM Changeset [945] by j.saito@…
Sorted out sources for null-pointer exceptions.
6:06 PM Ticket #130 (SimpleTox exporter) created by business@…
We need a SimpleTox? exporter to get metadata into ArrayTrack?. This is …
5:44 PM Changeset [944] by j.saito@…
Slightly modified Bootstrap for TEST_ENV.
4:34 PM Changeset [943] by t.w.abma@…
- new version of AAA-plugin
1:06 PM Changeset [942] by business@…
added a showByToken for assays, updated generated assay view
12:23 PM Changeset [941] by business@…
added a showByToken action to the study controller
11:05 AM Ticket #129 (Javascript error) created by business@…
JavaScript? error on the nbx3 instance in study/show/25 if you go to …

Oct 13, 2010:

3:43 PM Ticket #128 (exception after defining a study, cannot save the study) created by business@…
When creating a study with some generated samples, a popup box is …
3:40 PM Ticket #127 (take into account ontology versioning, make more use of Ontocat) created by business@…
Problem that originally raised versioning: When I click add more... to …
3:37 PM Ticket #126 (exception after importing subjects sheet) created by business@…
After importing the example subjects sheet, I got an error: …

Oct 12, 2010:

4:17 PM Changeset [940] by t.w.abma@…
- REST-controller should return correct authorization level back
12:19 PM Changeset [939] by t.w.abma@…
- added SpringSecurity? 'admin' and 'test' user to the bootstrap
12:11 PM Changeset [938] by t.w.abma@…
- GSCF working with AAAA-plugin, removed Melody-plugin which gave …
11:22 AM Changeset [937] by t.w.abma@…
- fixed (hopefully) integrity contraints error

Oct 11, 2010:

10:23 PM Changeset [936] by t.w.abma@…
- Nimble removed, AAAA-plugin installed (based on Spring Security), …
12:48 PM Changeset [935] by j.saito@…
Added dummy REST resource for getAuthorizationLevel.

Oct 8, 2010:

4:02 PM WikiStart edited by business@…
(diff)
3:43 PM Ticket #125 (Issue warning when no events are assigned to EventGroups or samples to ...) created by business@…
When a sampling event is not assigned to any EventGroup?, no samples …
2:47 PM Changeset [934] by j.saito@…
Adjusted CommunicationManager? to match closer with …
2:41 PM Ticket #124 (add new events to a stored study does not work) created by jildau.bouwman@…
If a study is already stored and smaples automatically created from …
2:37 PM Ticket #123 (order of samples in assay tab) created by jildau.bouwman@…
in the study capture tab assays, the samples seem to be randomly …
1:56 PM Ticket #122 (test) closed by support@…
fixed
1:44 PM Ticket #122 (test) created by support@…
1:31 PM WikiStart edited by support@…
(diff)

Oct 7, 2010:

1:08 PM Changeset [933] by business@…
fixed a bug in the belongsToGroup functions in Event and SamplingEvent?
10:51 AM Changeset [932] by j.a.m.wesbeek@…
- Added GSCF-specific check for the Config.groovy patch

Oct 6, 2010:

10:52 AM Changeset [931] by t.w.abma@…
- Configuration dummy update to trigger rebuild
10:43 AM Changeset [930] by t.w.abma@…
- Configuration dummy update to trigger rebuild
10:30 AM Changeset [929] by t.w.abma@…
- Configuration dummy update to trigger rebuild
10:22 AM Changeset [928] by t.w.abma@…
- Configuration dummy update to trigger rebuild
10:03 AM Changeset [927] by t.w.abma@…
- Configuration dummy update to trigger rebuild
8:47 AM TracFastCgi created by trac
8:47 AM TracUpgrade created by trac
8:47 AM TracInterfaceCustomization created by trac
8:47 AM TracTicketsCustomFields created by trac
8:47 AM TracUnicode created by trac
8:47 AM TracRevisionLog created by trac
8:47 AM TracReports created by trac
8:47 AM TracModWSGI created by trac
8:47 AM TracQuery created by trac
8:47 AM TracModPython created by trac
8:47 AM WikiMacros created by trac
8:47 AM TracPlugins created by trac
8:47 AM WikiRestructuredTextLinks created by trac
8:47 AM TracGuide created by trac
8:47 AM InterMapTxt created by trac
8:47 AM CamelCase created by trac
8:47 AM TracWiki created by trac
8:47 AM WikiHtml created by trac
8:47 AM WikiProcessors created by trac
8:47 AM WikiFormatting created by trac
8:47 AM TracAccessibility created by trac
8:47 AM TracTimeline created by trac
8:47 AM TracAdmin created by trac
8:47 AM TracBrowser created by trac
8:47 AM TracBackup created by trac
8:47 AM SandBox created by trac
8:47 AM TracIni created by trac
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8:47 AM PageTemplates created by trac
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8:47 AM TracSupport created by trac
8:47 AM TracImport created by trac
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8:47 AM TracPermissions created by trac
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8:47 AM TracRoadmap created by trac
8:47 AM InterWiki created by trac
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8:47 AM TracCgi created by trac
8:47 AM RecentChanges created by trac
8:47 AM TracFineGrainedPermissions created by trac
8:47 AM TracLinks created by trac
8:47 AM TracNavigation created by trac
8:47 AM WikiStart created by trac

Oct 5, 2010:

11:32 AM Changeset [926] by tabma
- Sandbox update to OAuth
11:27 AM Changeset [925] by tabma
- Sandbox update to OAuth
11:18 AM Changeset [924] by tabma
- Sandbox update to OAuth
11:10 AM Changeset [923] by tabma
- Sandbox update to OAuth
10:25 AM Changeset [922] by tabma
- Configuration dummy submit
10:21 AM Changeset [921] by tabma
- Configuration dummy submit
9:52 AM Changeset [920] by tabma
- Configuration dummy submit

Oct 4, 2010:

6:56 PM Changeset [919] by tabma
- added oauth method to Sandbox-controller to test
4:59 PM Changeset [918] by tabma
- added oauth method to Sandbox-controller to test
4:10 PM Changeset [917] by tabma
Added OAuth key and secret patch
4:08 PM Changeset [916] by tabma
3:55 PM Changeset [915] by tabma
- added production server URL (used by the OAuth-plugin for Grails) to …
3:47 PM Changeset [914] by tabma
- fixed OAuth tag for the index page
3:24 PM Changeset [913] by tabma
- fixed OAuth tag for the index page
2:49 PM Changeset [912] by tabma
- fixed OAuth tag for the index page
2:34 PM Changeset [911] by tabma
- fixed OAuth tag for the index page
12:20 PM Changeset [910] by tabma
-added Authorization-method to REST-controller
12:16 PM Changeset [909] by tabma
-added Authorization-method to REST-controller
12:09 PM Changeset [908] by tabma
-added Authorization-method to REST-controller
11:20 AM Changeset [907] by tabma
- added OAuth-link to index page of GSCF
11:10 AM Changeset [906] by tabma
-changed name to sampleToken in GetSamples? REST-call
11:05 AM Changeset [905] by tabma
- added OAauth plugin and Configuration variables (keys should be …

Oct 1, 2010:

11:46 AM Changeset [904] by jahn
Adjusted to new covention of using '...Token' instead of 'extenal...ID'.

Sep 30, 2010:

3:35 PM Changeset [903] by keesvb
Changed JSON name for study title to title in getStudies REST method

Sep 27, 2010:

5:11 PM Changeset [902] by jahn
Undone change to TemplateEntity?.
5:04 PM Changeset [901] by jahn
Added and tested new Rest methods in accordance with specs. Tested …

Sep 26, 2010:

12:39 AM Changeset [900] by keesvb
fix for bug #164 (workaround for GRAILS-6754)
Note: See TracTimeline for information about the timeline view.