Ticket #316 (closed defect: fixed)

Opened 3 years ago

Last modified 3 years ago

Template importer stopped working

Reported by: business@… Owned by: business@…
Priority: major Milestone: 0.6.5
Component: Unknown Version: 0.6.3
Keywords: Cc: work@…
Product: Operating system:
URL: Hardware:

Description

In GSCF from SVN HEAD, template importing fails. Is this caused by the gdt refactoring?

Template Mouse could not be parsed: groovy.lang.MissingMethodException: No signature of method: org.dbnp.gdt.Template.parse() is applicable for argument types: (groovy.util.slurpersupport.NodeChild, dbnp.authentication.SecUser) values: [Mousedbnp.studycapturing.SubjectStrainONTOLOGYTERMThis is an ontology term, if the right strain is not in the list please add it with 'add more'falsefalse103242838NCI ThesaurusA vocabulary for clinical care, translational and basic research, and public information and administrative activities.http://ncicb.nci.nih.gov/core/EVS10.03GenotypeONTOLOGYTERMIf present, indicate the genetic variance of the subject (e.g., mutagenized populations,knock-out/in,transgene etc)falsefalseGenotype typeSTRINGLISTIf a genotype was specified, please indicate here the type of the genotypefalsefalsewildtypetransgenicknock-outknock-inGenderSTRINGLISTfalsefalseMaleFemaleUnknownAgeLONGweeksAge at start of studyfalsefalseAge typeSTRINGLISTfalsefalsepostnatalembryonalCageSTRINGIndicate the cage used for housing (type and/or size)falsefalse#Mice in cageLONGIf known, indicate the number of mice per cagefalsefalseLitter sizeLONGIf known, indicate the litter size of the litter from which the subject originatesfalsefalseWeightDOUBLEgramIf known indicate the weight of the subject in grams at the start of the studyfalsefalse, dbnp.authentication.SecUser : 2] Possible solutions: save(), merge(), inUse(), list(), wait(), any()

Change History

Changed 3 years ago by robert@…

  • owner changed from robert@… to work@…
  • status changed from new to assigned

This indeed seems to has something to do with the refactoring. Assigning to Jeroen.

Changed 3 years ago by business@…

  • milestone changed from 0.7 to 0.6.4

Please add org.dbnp.gdt.Template.parse() again.

Changed 3 years ago by work@…

Added parse method in  GDT r152, please retest with inline plugin or wait for 0.0.13 to be released

Changed 3 years ago by work@…

  • owner changed from work@… to business@…

Changed 3 years ago by business@…

  • status changed from assigned to closed
  • resolution set to fixed
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