# # ChangeLog for trunk/src # # Generated by Trac 1.0.2 # Jan 18, 2021, 4:33:48 AM Mon, 24 Jan 2011 11:12:21 GMT work@… [1435] * trunk/grails-app/conf/config-ci.properties (moved) * trunk/grails-app/conf/config-dbnpdemo.properties (moved) * trunk/grails-app/conf/config-dbnptest.properties (moved) * trunk/grails-app/conf/config-development.properties (moved) * trunk/grails-app/conf/config-nmcdsptest.properties (moved) * trunk/grails-app/conf/config-production.properties (moved) * trunk/grails-app/conf/config-test.properties (moved) * trunk/grails-app/conf/config-www.properties (moved) - moved configuration back to grails-app/conf Sat, 22 Jan 2011 15:07:36 GMT robert@… [1432] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/lib (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/test/integration/gscf/OntologyTests.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) Made querying aware of the templates being moved to a plugin. Also ... Fri, 21 Jan 2011 20:31:31 GMT work@… [1431] * trunk/src/java/config-ci.properties (modified) * trunk/src/java/config-dbnpdemo.properties (modified) * trunk/src/java/config-dbnptest.properties (modified) * trunk/src/java/config-development.properties (modified) * trunk/src/java/config-nmcdsptest.properties (modified) * trunk/src/java/config-production.properties (modified) * trunk/src/java/config-test.properties (modified) * trunk/src/java/config-www.properties (modified) - fixed the facebook like button Fri, 21 Jan 2011 20:05:36 GMT work@… [1430] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapAuthentication.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) * trunk/grails-app/conf/GrailsMelodyConfig.groovy (modified) * trunk/grails-app/conf/Searchable.groovy (modified) * trunk/grails-app/conf/UrlMappings.groovy (modified) * trunk/grails-app/conf/application.properties (modified) * trunk/grails-app/conf/spring/resources.groovy (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/controllers/SearchableController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LogoutController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/RegisterController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/setup/SetupController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayModuleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/FileController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonAffiliationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonRoleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/RegistrationCode.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecRole.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUserSecRole.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SessionAuthenticatedUser.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportMapping.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Identity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/services/dbnp/authentication/AuthenticationService.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/FileService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/SynchronizationService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/utils/SimpleXMLCodec.groovy (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/grails-app/views/assay/create.gsp (modified) * trunk/grails-app/views/assay/edit.gsp (modified) * trunk/grails-app/views/assay/list.gsp (modified) * trunk/grails-app/views/assay/selectAssay.gsp (modified) * trunk/grails-app/views/assay/show.gsp (modified) * trunk/grails-app/views/common/_demo_intro.gsp (modified) * trunk/grails-app/views/common/_eventDescriptionTableRows.gsp (modified) * trunk/grails-app/views/common/_info.gsp (modified) * trunk/grails-app/views/common/_jquerytmsetup.gsp (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/email/_passwordReset.gsp (modified) * trunk/grails-app/views/email/_registrationConfirmationAdmin.gsp (modified) * trunk/grails-app/views/email/_registrationConfirmationUser.gsp (modified) * trunk/grails-app/views/error.gsp (modified) * trunk/grails-app/views/event/create.gsp (modified) * trunk/grails-app/views/event/createForEventDescription.gsp (modified) * trunk/grails-app/views/event/create_1.gsp (modified) * trunk/grails-app/views/event/create_auto.gsp (modified) * trunk/grails-app/views/event/create_timepicker.gsp (modified) * trunk/grails-app/views/event/edit.gsp (modified) * trunk/grails-app/views/event/list.gsp (modified) * trunk/grails-app/views/event/partial.gsp (modified) * trunk/grails-app/views/event/show.gsp (modified) * trunk/grails-app/views/exporter/index.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/importer/common/_ajaxflow.gsp (modified) * trunk/grails-app/views/importer/common/_datapreview.gsp (modified) * trunk/grails-app/views/importer/common/_error.gsp (modified) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/common/_navigation.gsp (modified) * trunk/grails-app/views/importer/common/_on_page.gsp (modified) * trunk/grails-app/views/importer/common/_page_footer.gsp (modified) * trunk/grails-app/views/importer/common/_page_header.gsp (modified) * trunk/grails-app/views/importer/common/_please_wait.gsp (modified) * trunk/grails-app/views/importer/common/_postview.gsp (modified) * trunk/grails-app/views/importer/common/_preview.gsp (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/common/_properties_vertical.gsp (modified) * trunk/grails-app/views/importer/common/_refresh_flow.gsp (modified) * trunk/grails-app/views/importer/common/_tabs.gsp (modified) * trunk/grails-app/views/importer/index.gsp (modified) * trunk/grails-app/views/importer/pages/_error.gsp (modified) * trunk/grails-app/views/importer/pages/_final_page.gsp (modified) * trunk/grails-app/views/importer/pages/_page_four.gsp (modified) * trunk/grails-app/views/importer/pages/_page_one.gsp (modified) * trunk/grails-app/views/importer/pages/_page_three.gsp (modified) * trunk/grails-app/views/importer/pages/_page_two.gsp (modified) * trunk/grails-app/views/layouts/dialog.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/layouts/nimble.gsp (modified) * trunk/grails-app/views/load/index.gsp (modified) * trunk/grails-app/views/login/auth.gsp (modified) * trunk/grails-app/views/login/denied.gsp (modified) * trunk/grails-app/views/person/create.gsp (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/create.gsp (modified) * trunk/grails-app/views/personAffiliation/edit.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personAffiliation/show.gsp (modified) * trunk/grails-app/views/personRole/create.gsp (modified) * trunk/grails-app/views/personRole/edit.gsp (modified) * trunk/grails-app/views/personRole/list.gsp (modified) * trunk/grails-app/views/personRole/show.gsp (modified) * trunk/grails-app/views/pilot/edit.gsp (modified) * trunk/grails-app/views/pilot/index.gsp (modified) * trunk/grails-app/views/pilot/list.gsp (modified) * trunk/grails-app/views/pilot/show.gsp (modified) * trunk/grails-app/views/publication/add.gsp (modified) * trunk/grails-app/views/publication/create.gsp (modified) * trunk/grails-app/views/publication/edit.gsp (modified) * trunk/grails-app/views/publication/list.gsp (modified) * trunk/grails-app/views/publication/show.gsp (modified) * trunk/grails-app/views/query/common/_error.gsp (modified) * trunk/grails-app/views/query/common/_navigation.gsp (modified) * trunk/grails-app/views/query/common/_query.gsp (modified) * trunk/grails-app/views/query/common/_tabs.gsp (modified) * trunk/grails-app/views/query/index.gsp (modified) * trunk/grails-app/views/query/mainPage.gsp (modified) * trunk/grails-app/views/query/pages/_biomarker.gsp (modified) * trunk/grails-app/views/query/pages/_group.gsp (modified) * trunk/grails-app/views/query/pages/_inputQuery.gsp (modified) * trunk/grails-app/views/query/pages/_result.gsp (modified) * trunk/grails-app/views/query/pages/_sample.gsp (modified) * trunk/grails-app/views/query/pages/_study.gsp (modified) * trunk/grails-app/views/query/results.gsp (modified) * trunk/grails-app/views/query/selectsample.gsp (modified) * trunk/grails-app/views/register/forgotPassword.gsp (modified) * trunk/grails-app/views/register/index.gsp (modified) * trunk/grails-app/views/register/resetPassword.gsp (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/searchable/index.gsp (modified) * trunk/grails-app/views/setup/common/_wizard.gsp (modified) * trunk/grails-app/views/setup/index.gsp (modified) * trunk/grails-app/views/setup/pages/_start.gsp (modified) * trunk/grails-app/views/simpleQuery/common/_query.gsp (modified) * trunk/grails-app/views/simpleQuery/mainPage.gsp (modified) * trunk/grails-app/views/study/create.gsp (modified) * trunk/grails-app/views/study/createTimelineBandsJs.gsp (modified) * trunk/grails-app/views/study/edit.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_assays.gsp (modified) * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/grails-app/views/study/show_events_timeline.gsp (modified) * trunk/grails-app/views/study/show_persons.gsp (modified) * trunk/grails-app/views/study/show_publications.gsp (modified) * trunk/grails-app/views/study/show_samples.gsp (modified) * trunk/grails-app/views/study/show_subjects.gsp (modified) * trunk/grails-app/views/studyWizard/common/_ajaxflow.gsp (modified) * trunk/grails-app/views/studyWizard/common/_error.gsp (modified) * trunk/grails-app/views/studyWizard/common/_navigation.gsp (modified) * trunk/grails-app/views/studyWizard/common/_on_page.gsp (modified) * trunk/grails-app/views/studyWizard/common/_page_footer.gsp (modified) * trunk/grails-app/views/studyWizard/common/_page_header.gsp (modified) * trunk/grails-app/views/studyWizard/common/_please_wait.gsp (modified) * trunk/grails-app/views/studyWizard/common/_refresh_flow.gsp (modified) * trunk/grails-app/views/studyWizard/common/_tabs.gsp (modified) * trunk/grails-app/views/studyWizard/index.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_assay_groups.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_assays.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_confirmation.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_done.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_error.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_events.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_final_page.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_groups.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_modify.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_page_four.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_page_one.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_page_three.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_page_two.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_redirect.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_samples.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_samples_previous_warning.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_start.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_study.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_subjects.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_unassigned_samplingEvent_warning.gsp (modified) * trunk/grails-app/views/template/export.gsp (modified) * trunk/grails-app/views/template/handleImportedFile.gsp (modified) * trunk/grails-app/views/template/importTemplate.gsp (modified) * trunk/grails-app/views/template/saveImportedTemplates.gsp (modified) * trunk/grails-app/views/template/xml.gsp (modified) * trunk/grails-app/views/templateEditor/_ontologyDialog.gsp (modified) * trunk/grails-app/views/templateEditor/compare.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_available.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_disabledFieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_domainField.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_fieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liField.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldDomain.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldNotInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplate.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateNonEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_selected.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_templateForm.gsp (modified) * trunk/grails-app/views/templateEditor/error.gsp (modified) * trunk/grails-app/views/templateEditor/index.gsp (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) * trunk/grails-app/views/user/create.gsp (modified) * trunk/grails-app/views/user/edit.gsp (modified) * trunk/grails-app/views/user/search.gsp (modified) * trunk/grails-app/views/userRegistration/add.gsp (modified) * trunk/grails-app/views/userRegistration/confirmAdmin.gsp (modified) * trunk/grails-app/views/userRegistration/confirmUser.gsp (modified) * trunk/grails-app/views/userRegistration/index.gsp (modified) * trunk/grails-app/views/userRegistration/profile.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) * trunk/src/groovy/nl/metabolomicscentre/dsp/http/BasicAuthentication.groovy (modified) * trunk/src/java/config-ci.properties (modified) * trunk/src/java/config-dbnpdemo.properties (modified) * trunk/src/java/config-dbnptest.properties (modified) * trunk/src/java/config-development.properties (modified) * trunk/src/java/config-nmcdsptest.properties (modified) * trunk/src/java/config-production.properties (modified) * trunk/src/java/config-test.properties (modified) * trunk/src/java/config-www.properties (modified) * trunk/src/java/dbnp/data/CleanDataLayer.java (modified) * trunk/src/sass/_rounded.sass (modified) * trunk/src/sass/_uielements.sass (modified) * trunk/src/templates/artifacts/Controller.groovy (modified) * trunk/src/templates/artifacts/DomainClass.groovy (modified) * trunk/src/templates/artifacts/Filters.groovy (modified) * trunk/src/templates/artifacts/Script.groovy (modified) * trunk/src/templates/artifacts/Service.groovy (modified) * trunk/src/templates/artifacts/TagLib.groovy (modified) * trunk/src/templates/artifacts/Tests.groovy (modified) * trunk/src/templates/artifacts/WebTest.groovy (modified) * trunk/src/templates/scaffolding/Controller.groovy (modified) * trunk/src/templates/scaffolding/create.gsp (modified) * trunk/src/templates/scaffolding/edit.gsp (modified) * trunk/src/templates/scaffolding/list.gsp (modified) * trunk/src/templates/scaffolding/renderEditor.template (modified) * trunk/src/templates/scaffolding/show.gsp (modified) * trunk/src/templates/war/web.xml (modified) * trunk/test/integration/RestControllerTests.groovy (modified) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (modified) * trunk/test/integration/gscf/EventGroupTests.groovy (modified) * trunk/test/integration/gscf/OntologyTests.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) * trunk/test/integration/gscf/StudyTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) * trunk/test/unit/HomeControllerTests.groovy (modified) * trunk/test/unit/RestControllerTests.groovy (modified) * trunk/test/unit/SandboxControllerTests.groovy (modified) * trunk/test/unit/SearchableControllerTests.groovy (modified) * trunk/test/unit/StudyTests.groovy (modified) * trunk/test/unit/dbnp/authentication/AuthenticationServiceTests.groovy (modified) * trunk/test/unit/dbnp/authentication/GSCFUserDetailsServiceTests.groovy (modified) * trunk/test/unit/dbnp/authentication/GSCFUserDetailsTests.groovy (modified) * trunk/test/unit/dbnp/authentication/RegisterControllerTests.groovy (modified) * trunk/test/unit/dbnp/authentication/SessionAuthenticatedUserTests.groovy (modified) * trunk/test/unit/dbnp/authentication/UserTests.groovy (modified) * trunk/test/unit/dbnp/data/FeatureBaseTests.groovy (modified) * trunk/test/unit/dbnp/data/OntologyControllerTests.groovy (modified) * trunk/test/unit/dbnp/data/TermControllerTests.groovy (modified) * trunk/test/unit/dbnp/importer/CellTests.groovy (modified) * trunk/test/unit/dbnp/importer/ColumnTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImportRecordTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImporterControllerTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImporterServiceTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImporterTagLibTests.groovy (modified) * trunk/test/unit/dbnp/query/CriterionTests.groovy (modified) * trunk/test/unit/dbnp/query/QueryControllerTests.groovy (modified) * trunk/test/unit/dbnp/query/SearchTests.groovy (modified) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayModuleControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventDescriptionTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventGroupTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/FileControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/FileServiceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/GroupTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/OntologyTermTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/OntologyTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PersonAffiliationControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PersonControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PersonRoleControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/ProtocolInstanceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/ProtocolParameterTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/ProtocolTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PublicationControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/RelTimeTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SampleTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SamplingEventTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SimpleQueryControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SubjectControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SubjectGroupTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SubjectTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEditorControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEntityTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateFieldFileTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateFieldTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateStudyFieldTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TermEditorControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/WizardControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/WizardTagLibTests.groovy (modified) * trunk/test/unit/dbnp/user/AuthServiceTests.groovy (modified) * trunk/test/unit/gscf/SynchronizationServiceTests.groovy (modified) * trunk/test/webtest/conf/webtest.properties (modified) * trunk/test/webtest/gscf/CreateStudyWebTests.groovy (modified) * trunk/test/webtest/gscf/EditStudyWebTests.groovy (modified) - set keyword expansion Fri, 21 Jan 2011 18:37:02 GMT work@… [1426] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/LoadController.groovy (deleted) * trunk/grails-app/controllers/dbnp/data (deleted) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayModuleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/EventController.groovy (deleted) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SubjectController.groovy (deleted) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/data (deleted) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayModule.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldListItem.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (deleted) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/SynchronizationService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/lib/ontoCAT_v0.9.6.1.jar (deleted) * trunk/lib/xstream-1.3.1.jar (deleted) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) - Resolved part of improvement #225 - refactored the template model ... Fri, 21 Jan 2011 15:30:04 GMT robert@… [1424] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (added) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (added) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/test/integration/dbnp/query (added) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (added) * trunk/test/unit/FeedbackControllerTests.groovy (deleted) * trunk/test/unit/dbnp/authentication/AuthenticateControllerTests.groovy (deleted) * trunk/test/unit/dbnp/authentication/AuthenticationTagLibTests.groovy (deleted) * trunk/test/unit/dbnp/clinicaldata (deleted) * trunk/test/unit/dbnp/query/CriterionTests.groovy (added) * trunk/test/unit/dbnp/query/SearchTests.groovy (modified) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (added) * trunk/web-app/css/advancedQuery.css (modified) * trunk/web-app/js/advancedQuery.js (modified) Improved querying and created a possibility to search for assays Tue, 18 Jan 2011 19:41:42 GMT robert@… [1415] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (added) * trunk/grails-app/views/advancedQuery (added) * trunk/grails-app/views/advancedQuery/index.gsp (added) * trunk/grails-app/views/advancedQuery/results.gsp (added) * trunk/grails-app/views/advancedQuery/studyresults.gsp (added) * trunk/src/groovy/dbnp/query (added) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (added) * trunk/src/groovy/dbnp/query/Search.groovy (added) * trunk/src/groovy/dbnp/query/StudySearch.groovy (added) * trunk/test/unit/dbnp/query/SearchTests.groovy (added) * trunk/web-app/css/advancedQuery.css (added) * trunk/web-app/js/advancedQuery.js (added) First version of advanced querying Tue, 18 Jan 2011 15:38:58 GMT work@… [1414] * trunk/grails-app/conf/Config.groovy (modified) * trunk/src/java/config-ci.properties (moved) * trunk/src/java/config-dbnpdemo.properties (moved) * trunk/src/java/config-dbnptest.properties (moved) * trunk/src/java/config-development.properties (moved) * trunk/src/java/config-nmcdsptest.properties (moved) * trunk/src/java/config-production.properties (moved) * trunk/src/java/config-test.properties (moved) * trunk/src/java/config-www.properties (moved) - moved the environment specific properties files to src/java to make ... Thu, 25 Nov 2010 09:56:40 GMT j.saito@… [1199] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Further streamlined CommunicationManager. It now builds fetches its ... Wed, 24 Nov 2010 10:47:41 GMT j.saito@… [1196] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Streamlined CommunicationManager and adjusted it to suit ... Thu, 28 Oct 2010 14:39:45 GMT j.saito@… [1010] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Ticket #57 - Unified getAssays and getAssay. Also, added ... Wed, 20 Oct 2010 18:45:40 GMT root [958] * trunk/src/templates/artifacts/WebTest.groovy (modified) test for properties Fri, 08 Oct 2010 12:47:23 GMT j.saito@… [934] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Adjusted CommunicationManager to match closer with ... Tue, 24 Aug 2010 15:26:25 GMT keesvb [835] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) added metabolomics assay examples, cleaned up RestController, changed ... Mon, 23 Aug 2010 14:21:16 GMT keesvb [831] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/services/dbnp/user (added) * trunk/grails-app/services/dbnp/user/AuthService.groovy (added) * trunk/src/groovy/nl/metabolomicscentre/dsp/http/BasicAuthentication.groovy (added) * trunk/test/unit/dbnp/user/AuthServiceTests.groovy (added) first implementation of user-based REST services, only checks whether ... Mon, 23 Aug 2010 07:29:03 GMT keesvb [829] * trunk/grails-app/conf/NimbleBootStrap.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/nl (added) * trunk/src/groovy/nl/metabolomicscentre (added) * trunk/src/groovy/nl/metabolomicscentre/dsp (added) * trunk/src/groovy/nl/metabolomicscentre/dsp/http (added) started authentication implementation Wed, 04 Aug 2010 12:59:30 GMT jahn [773] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added rest method for querying measurement values. Mon, 02 Aug 2010 09:30:43 GMT vinlud [755] * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/grails-app/views/simpleQuery/common/_query.gsp (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Sam module changes including rest interface, merging results, ... Fri, 16 Jul 2010 11:47:33 GMT jahn [657] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) The getSample rest resource now fetches Samples instead of Assays ... Tue, 13 Jul 2010 15:49:15 GMT jahn [649] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added five controller actions (RestController) and corresponding Rest ... Tue, 13 Jul 2010 11:32:05 GMT jahn [648] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Corrected error in example of documentation for Rest resource ... Mon, 12 Jul 2010 10:41:54 GMT jahn [646] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Fixed rest url. Fri, 09 Jul 2010 11:38:18 GMT jahn [645] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Minor changes. Fri, 09 Jul 2010 09:34:14 GMT jahn [644] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added enhanced REST wrapper method for querying SAM. Fri, 02 Jul 2010 07:39:48 GMT vinlud [641] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added dummy search function Thu, 01 Jul 2010 14:19:46 GMT jahn [636] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) * trunk/src/groovy/dbnp/rest/gscf (deleted) Updated CommunicationManager to support URL generation for SAM views. ... Tue, 29 Jun 2010 13:36:04 GMT jahn [631] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (deleted) * trunk/src/groovy/dbnp/rest/common (added) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (added) * trunk/src/groovy/dbnp/rest/gscf (added) * trunk/src/groovy/dbnp/rest/gscf/SAMtoGSCFRestWrapper.groovy (added) Cleaned up CommunicationManager and put it in uniform use and package ... Fri, 25 Jun 2010 12:03:22 GMT jahn [621] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Added java.net.URLEncoder.encode() to protect URL parameters. Fri, 25 Jun 2010 09:55:00 GMT jahn [615] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Made generating of SAM URLs more readable. Fri, 25 Jun 2010 08:39:24 GMT jahn [609] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Adjusted communication for SAM on NBX5. Fri, 25 Jun 2010 08:27:01 GMT jahn [608] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Added methods supplying SAM urls. Thu, 10 Jun 2010 09:21:43 GMT jahn [553] * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (deleted) * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (added) Changed name of CCMCommunicationManager to CommunicationManager. Mon, 07 Jun 2010 09:13:51 GMT jahn [537] * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) Added empty method for providing query results of a query on Simple ... Thu, 03 Jun 2010 07:48:33 GMT jahn [515] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) REST resources for communicating with the Simple Assay Module. Fri, 28 May 2010 08:36:00 GMT jahn [491] * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) Removed obvious error that led to compile-time error. Fri, 28 May 2010 08:24:12 GMT jahn [490] * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) Added connection to test server nbx5. Wed, 26 May 2010 15:40:41 GMT jahn [480] * trunk/grails-app/controllers/RestController.groovy (added) * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/src/groovy/dbnp (added) * trunk/src/groovy/dbnp/rest (added) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (added) * trunk/src/java/dbnp/data/CleanDataLayer.java (modified) Providing some methods for showing that REST/JSON actually works for ... Thu, 15 Apr 2010 15:06:19 GMT duh [344] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (added) * trunk/grails-app/views/layouts/dialog.gsp (added) * trunk/grails-app/views/templateEditor (added) * trunk/grails-app/views/templateEditor/pages (added) * trunk/grails-app/views/templateEditor/templates.gsp (added) * trunk/src/templates/war/web.xml (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEditorControllerTests.groovy (added) - initial template editor (for use in dialogs) Tue, 23 Mar 2010 10:06:40 GMT duh [304] * trunk/src/templates/artifacts/Controller.groovy (modified) * trunk/src/templates/artifacts/DomainClass.groovy (modified) * trunk/src/templates/artifacts/Filters.groovy (modified) * trunk/src/templates/artifacts/Service.groovy (modified) * trunk/src/templates/artifacts/TagLib.groovy (modified) * trunk/src/templates/artifacts/Tests.groovy (modified) * trunk/src/templates/artifacts/WebTest.groovy (modified) - added default comments to grails base templates Thu, 18 Mar 2010 15:43:16 GMT keesvb [286] * trunk/src/templates/artifacts/Controller.groovy (added) * trunk/src/templates/artifacts/DomainClass.groovy (added) * trunk/src/templates/artifacts/Filters.groovy (added) * trunk/src/templates/artifacts/Script.groovy (added) * trunk/src/templates/artifacts/Service.groovy (added) * trunk/src/templates/artifacts/TagLib.groovy (added) * trunk/src/templates/artifacts/Tests.groovy (added) * trunk/src/templates/artifacts/WebTest.groovy (added) * trunk/src/templates/scaffolding/Controller.groovy (added) * trunk/src/templates/scaffolding/create.gsp (added) * trunk/src/templates/scaffolding/edit.gsp (added) * trunk/src/templates/scaffolding/list.gsp (added) * trunk/src/templates/scaffolding/renderEditor.template (added) * trunk/src/templates/scaffolding/show.gsp (added) * trunk/src/templates/war/web.xml (added) re-added template files, needed for WAR building Wed, 10 Feb 2010 15:09:52 GMT keesvb [187] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalMeasurement.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalMeasurementType.groovy (deleted) * trunk/grails-app/domain/dbnp/data/FeatureBase.groovy (modified) * trunk/grails-app/domain/dbnp/data/FeatureType.groovy (copied) * trunk/grails-app/services/dbnp/clinicaldata/ClinicalDataLayerService.groovy (modified) * trunk/src/java/dbnp/data/CleanDataLayer.java (modified) changed definition of clean data layer, implemented it for the ... Fri, 22 Jan 2010 12:02:40 GMT keesvb [106] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/LoadController.groovy (modified) * trunk/grails-app/controllers/OntologyController.groovy (modified) * trunk/grails-app/controllers/TermController.groovy (modified) * trunk/grails-app/controllers/dbnp/clinicaldata (added) * trunk/grails-app/controllers/dbnp/clinicaldata/ClinicalAssayController.groovy (added) * trunk/grails-app/controllers/dbnp/clinicaldata/ClinicalMeasurementController.groovy (added) * trunk/grails-app/domain/dbnp/clinicaldata (added) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalAssay.groovy (added) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalAssayInstance.groovy (added) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalFloatData.groovy (added) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalMeasurement.groovy (added) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalMeasurementType.groovy (added) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalStringData.groovy (added) * trunk/grails-app/domain/dbnp/data (added) * trunk/grails-app/domain/dbnp/data/FeatureBase.groovy (added) * trunk/grails-app/domain/dbnp/data/Ontology.groovy (moved) * trunk/grails-app/domain/dbnp/data/Term.groovy (moved) * trunk/grails-app/domain/dbnp/studycapturing/EventDescription.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Protocol.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/ProtocolParameter.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/services/dbnp (added) * trunk/grails-app/services/dbnp/clinicaldata (added) * trunk/grails-app/services/dbnp/clinicaldata/ClinicalDataLayerService.groovy (added) * trunk/grails-app/views/clinicalAssay (added) * trunk/grails-app/views/clinicalData (added) * trunk/src/java/dbnp (added) * trunk/src/java/dbnp/data (added) * trunk/src/java/dbnp/data/CleanDataLayer.java (added) * trunk/test/unit/dbnp/clinicaldata (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalAssayControllerTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalAssayInstanceTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalAssayTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalDataLayerServiceTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalFloatDataTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalMeasurementControllerTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalMeasurementTests.groovy (added) * trunk/test/unit/dbnp/clinicaldata/ClinicalStringDataTests.groovy (added) * trunk/test/unit/dbnp/data (added) * trunk/test/unit/dbnp/data/FeatureBaseTests.groovy (added) added first version of clean data layer specification and clinical ... Wed, 13 Jan 2010 14:25:28 GMT ademcan [85] * trunk/grails-app/controllers/dbnp (added) * trunk/grails-app/controllers/dbnp/studycapturing (added) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/views/language (added) * trunk/grails-app/views/language/create.gsp (added) * trunk/grails-app/views/language/edit.gsp (added) * trunk/grails-app/views/language/list.gsp (added) * trunk/grails-app/views/language/show.gsp (added) * trunk/grails-app/views/study (added) * trunk/grails-app/views/study/create.gsp (added) * trunk/grails-app/views/study/edit.gsp (added) * trunk/grails-app/views/study/list.gsp (added) * trunk/grails-app/views/study/list_backup.gsp (added) * trunk/grails-app/views/study/show.gsp (added) * trunk/src/templates (added) * trunk/src/templates/artifacts (added) * trunk/src/templates/scaffolding (added) * trunk/src/templates/war (added) the templates for the Study class, I have modified the scaffolding view. Thu, 29 Oct 2009 13:01:32 GMT duh [37] * trunk/application.properties (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (added) * trunk/grails-app/conf/NimbleConfig.groovy (added) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (added) * trunk/grails-app/conf/NimbleUrlMappings.groovy (added) * trunk/grails-app/controllers/BaseController.groovy (modified) * trunk/grails-app/domain/gscf (added) * trunk/grails-app/domain/gscf/Profile.groovy (added) * trunk/grails-app/domain/gscf/User.groovy (added) * trunk/grails-app/i18n/shiro.properties (added) * trunk/grails-app/realms (added) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/index.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/templates (added) * trunk/grails-app/views/templates/nimble (added) * trunk/grails-app/views/templates/nimble/help (added) * trunk/grails-app/views/templates/nimble/help/_accountcreationpolicy.gsp (added) * trunk/grails-app/views/templates/nimble/help/_passwordpolicy.gsp (added) * trunk/grails-app/views/templates/nimble/help/_usernamepolicy.gsp (added) * trunk/grails-app/views/templates/nimble/login (added) * trunk/grails-app/views/templates/nimble/login/_login.gsp (added) * trunk/grails-app/views/templates/nimble/mail (added) * trunk/grails-app/views/templates/nimble/mail/_accountregistration_email.gsp (added) * trunk/grails-app/views/templates/nimble/mail/_emailchange_email.gsp (added) * trunk/grails-app/views/templates/nimble/mail/_forgottenpassword_email.gsp (added) * trunk/grails-app/views/templates/nimble/mail/_forgottenpassword_external_email.gsp (added) * trunk/grails-app/views/templates/nimble/navigation (added) * trunk/grails-app/views/templates/nimble/navigation/_topnavigation.gsp (added) * trunk/grails-app/views/templates/nimble/profile (added) * trunk/grails-app/views/templates/nimble/profile/_banner.gsp (added) * trunk/grails-app/views/templates/nimble/profile/_currentstatus.gsp (added) * trunk/grails-app/views/templates/nimble/profile/_emailupdated.gsp (added) * trunk/grails-app/views/templates/nimble/profile/_left.gsp (added) * trunk/grails-app/views/templates/nimble/profile/_miniprofile.gsp (added) * trunk/grails-app/views/templates/nimble/profile/_socialmedia.gsp (added) * trunk/src/sass (added) * trunk/src/sass/_rounded.sass (added) * trunk/src/sass/_uielements.sass (added) - installed and implemented nimble plugin - setup basic nimble ... Wed, 14 Oct 2009 10:06:53 GMT duh [4] * trunk/application.properties (added) * trunk/build.xml (added) * trunk/grails-app (added) * trunk/grails-app/conf (added) * trunk/grails-app/conf/BootStrap.groovy (added) * trunk/grails-app/conf/Config.groovy (added) * trunk/grails-app/conf/DataSource.groovy (added) * trunk/grails-app/conf/UrlMappings.groovy (added) * trunk/grails-app/conf/hibernate (added) * trunk/grails-app/conf/spring (added) * trunk/grails-app/conf/spring/resources.groovy (added) * trunk/grails-app/controllers (added) * trunk/grails-app/domain (added) * trunk/grails-app/i18n (added) * trunk/grails-app/i18n/messages.properties (added) * trunk/grails-app/i18n/messages_de.properties (added) * trunk/grails-app/i18n/messages_es.properties (added) * trunk/grails-app/i18n/messages_fr.properties (added) * trunk/grails-app/i18n/messages_it.properties (added) * trunk/grails-app/i18n/messages_ja.properties (added) * trunk/grails-app/i18n/messages_nl.properties (added) * trunk/grails-app/i18n/messages_pt_BR.properties (added) * trunk/grails-app/i18n/messages_ru.properties (added) * trunk/grails-app/i18n/messages_th.properties (added) * trunk/grails-app/i18n/messages_zh_CN.properties (added) * trunk/grails-app/services (added) * trunk/grails-app/taglib (added) * trunk/grails-app/utils (added) * trunk/grails-app/views (added) * trunk/grails-app/views/error.gsp (added) * trunk/grails-app/views/index.gsp (added) * trunk/grails-app/views/layouts (added) * trunk/grails-app/views/layouts/main.gsp (added) * trunk/gscf-test.launch (added) * trunk/gscf.launch (added) * trunk/gscf.tmproj (added) * trunk/ivy.xml (added) * trunk/ivysettings.xml (added) * trunk/lib (added) * trunk/scripts (added) * trunk/src (added) * trunk/src/groovy (added) * trunk/src/java (added) * trunk/stacktrace.log (added) * trunk/test (added) * trunk/test/integration (added) * trunk/test/unit (added) * trunk/web-app (added) * trunk/web-app/META-INF (added) * trunk/web-app/WEB-INF (added) * trunk/web-app/WEB-INF/applicationContext.xml (added) * trunk/web-app/WEB-INF/sitemesh.xml (added) * trunk/web-app/WEB-INF/tld (added) * trunk/web-app/WEB-INF/tld/c.tld (added) * trunk/web-app/WEB-INF/tld/fmt.tld (added) * trunk/web-app/WEB-INF/tld/grails.tld (added) * trunk/web-app/WEB-INF/tld/spring.tld (added) * trunk/web-app/css (added) * trunk/web-app/css/main.css (added) * trunk/web-app/images (added) * trunk/web-app/images/favicon.ico (added) * trunk/web-app/images/grails_logo.jpg (added) * trunk/web-app/images/skin (added) * trunk/web-app/images/skin/database_add.png (added) * trunk/web-app/images/skin/database_delete.png (added) * trunk/web-app/images/skin/database_edit.png (added) * trunk/web-app/images/skin/database_save.png (added) * trunk/web-app/images/skin/database_table.png (added) * trunk/web-app/images/skin/exclamation.png (added) * trunk/web-app/images/skin/house.png (added) * trunk/web-app/images/skin/information.png (added) * trunk/web-app/images/skin/shadow.jpg (added) * trunk/web-app/images/skin/sorted_asc.gif (added) * trunk/web-app/images/skin/sorted_desc.gif (added) * trunk/web-app/images/spinner.gif (added) * trunk/web-app/js (added) * trunk/web-app/js/application.js (added) * trunk/web-app/js/prototype (added) * trunk/web-app/js/prototype/animation.js (added) * trunk/web-app/js/prototype/builder.js (added) * trunk/web-app/js/prototype/controls.js (added) * trunk/web-app/js/prototype/dragdrop.js (added) * trunk/web-app/js/prototype/effects.js (added) * trunk/web-app/js/prototype/prototype.js (added) * trunk/web-app/js/prototype/rico.js (added) * trunk/web-app/js/prototype/scriptaculous.js (added) * trunk/web-app/js/prototype/slider.js (added) * trunk/web-app/js/prototype/sound.js (added) * trunk/web-app/js/prototype/unittest.js (added) Initial check-in of a fresh grails application