# # ChangeLog for trunk/src/groovy/dbnp # # Generated by Trac 1.0.2 # Jan 18, 2021, 5:56:25 AM Tue, 15 Feb 2011 14:05:23 GMT robert@… [1524] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/views/advancedQuery/list.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/web-app/css/advancedQuery.css (modified) * trunk/web-app/js/advancedQueryResults.js (modified) Refactored some of the querying stuff and built in 'check all' checkboxes Mon, 14 Feb 2011 15:49:54 GMT robert@… [1521] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/dbnp (added) * trunk/grails-app/conf/dbnp/configuration (added) * trunk/grails-app/conf/dbnp/configuration/BootStrapAuthentication.groovy (added) * trunk/grails-app/conf/dbnp/configuration/BootStrapStudies.groovy (added) * trunk/grails-app/conf/dbnp/configuration/BootStrapTemplates.groovy (moved) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (modified) Changes in samplesearch test related to #313 Mon, 07 Feb 2011 15:07:54 GMT robert@… [1501] * trunk/grails-app/conf/config-ci.properties (modified) * trunk/grails-app/conf/config-dbnpdemo.properties (modified) * trunk/grails-app/conf/config-dbnptest.properties (modified) * trunk/grails-app/conf/config-development.properties (modified) * trunk/grails-app/conf/config-nmcdsptest.properties (modified) * trunk/grails-app/conf/config-production.properties (modified) * trunk/grails-app/conf/config-test.properties (modified) * trunk/grails-app/conf/config-www.properties (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleCommunicationService.groovy (modified) * trunk/grails-app/views/advancedQuery/_criteria.gsp (modified) * trunk/grails-app/views/advancedQuery/_resultbuttons.gsp (modified) * trunk/grails-app/views/advancedQuery/_resultsform.gsp (added) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/advancedQuery/list.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/web-app/css/advancedQuery.css (modified) * trunk/web-app/js/advancedQueryResults.js (added) * trunk/web-app/js/jquery.dataTables.min.js (added) * trunk/web-app/js/paginate.js (added) - Number of seconds for the rest controller to keep data in cache is ... Thu, 03 Feb 2011 09:51:16 GMT robert@… [1487] * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (modified) * trunk/web-app/css/default_style.css (modified) - Fixed StudySearch unit tests (#303) - Changed css error message to ... Thu, 03 Feb 2011 09:02:15 GMT t.w.abma@… [1483] * trunk/src/groovy/dbnp/query/Search.groovy (modified) - fixed Search (code was committed with merge conflict messages in ... Wed, 02 Feb 2011 15:40:22 GMT robert@… [1482] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LogoutController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleCommunicationService.groovy (modified) * trunk/grails-app/views/advancedQuery/_criteria.gsp (added) * trunk/grails-app/views/advancedQuery/_resultbuttons.gsp (added) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/advancedQuery/list.gsp (added) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/web-app/css/advancedQuery.css (modified) * trunk/web-app/css/default_style.css (modified) * trunk/web-app/js/advancedQuery.js (added) Implemented saving of queries Wed, 02 Feb 2011 12:52:01 GMT s.h.sikkema@… [1478] * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (modified) Made StudySearchTests succeed while still being able to manually ... Wed, 02 Feb 2011 10:54:51 GMT s.h.sikkema@… [1473] * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/test/unit/dbnp/data/OntologyControllerTests.groovy (deleted) * trunk/test/unit/dbnp/data/TermControllerTests.groovy (deleted) * trunk/test/unit/dbnp/query/CriterionTests.groovy (modified) * trunk/test/unit/dbnp/query/SearchTests.groovy (modified) * trunk/test/unit/dbnp/query/SimpleQueryControllerTests.groovy (moved) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventGroupTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/StudyWizardControllerTests.groovy (moved) * trunk/test/unit/dbnp/studycapturing/SubjectControllerTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/TermEditorControllerTests.groovy (deleted) Fixed tests and removed obsolete ones so grails test-app works with ... Mon, 31 Jan 2011 19:16:03 GMT robert@… [1458] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleCommunicationService.groovy (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/grails-app/views/user/search.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) - Implemented a cache for module rest calls, to increase performance ... Mon, 31 Jan 2011 13:14:35 GMT work@… [1457] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleNotificationService.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) - fixed missing imports caused by Intellij's smart refactoring... ... Mon, 31 Jan 2011 12:27:30 GMT business@… [1456] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayModuleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleNotificationService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/pages/_page_one.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (modified) * trunk/test/integration/gscf/OntologyTests.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) * trunk/test/unit/dbnp/query/CriterionTests.groovy (modified) * trunk/test/unit/dbnp/query/SearchTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/OntologyTermTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/OntologyTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/RelTimeTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/TemplateEditorControllerTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/TemplateEntityTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/TemplateFieldFileTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/TemplateFieldTests.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/TemplateTests.groovy (deleted) moved gdt package to org.dbnp, moved tests for RelTime, ... Mon, 24 Jan 2011 14:48:46 GMT robert@… [1436] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/lib/jaxrpc.jar (added) * trunk/lib/ols-client.jar (added) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) Improved querying, fixed some tests and added imports of the GDT plugin Sat, 22 Jan 2011 15:07:36 GMT robert@… [1432] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/lib (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/test/integration/gscf/OntologyTests.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) Made querying aware of the templates being moved to a plugin. Also ... Fri, 21 Jan 2011 20:05:36 GMT work@… [1430] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapAuthentication.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) * trunk/grails-app/conf/GrailsMelodyConfig.groovy (modified) * trunk/grails-app/conf/Searchable.groovy (modified) * trunk/grails-app/conf/UrlMappings.groovy (modified) * trunk/grails-app/conf/application.properties (modified) * trunk/grails-app/conf/spring/resources.groovy (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/controllers/SearchableController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LogoutController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/RegisterController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/setup/SetupController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayModuleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/FileController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonAffiliationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonRoleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/RegistrationCode.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecRole.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUserSecRole.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SessionAuthenticatedUser.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportMapping.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Identity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/services/dbnp/authentication/AuthenticationService.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/FileService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/SynchronizationService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/utils/SimpleXMLCodec.groovy (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/grails-app/views/assay/create.gsp (modified) * trunk/grails-app/views/assay/edit.gsp (modified) * trunk/grails-app/views/assay/list.gsp (modified) * trunk/grails-app/views/assay/selectAssay.gsp (modified) * trunk/grails-app/views/assay/show.gsp (modified) * trunk/grails-app/views/common/_demo_intro.gsp (modified) * trunk/grails-app/views/common/_eventDescriptionTableRows.gsp (modified) * trunk/grails-app/views/common/_info.gsp (modified) * trunk/grails-app/views/common/_jquerytmsetup.gsp (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/email/_passwordReset.gsp (modified) * trunk/grails-app/views/email/_registrationConfirmationAdmin.gsp (modified) * trunk/grails-app/views/email/_registrationConfirmationUser.gsp (modified) * trunk/grails-app/views/error.gsp (modified) * trunk/grails-app/views/event/create.gsp (modified) * trunk/grails-app/views/event/createForEventDescription.gsp (modified) * trunk/grails-app/views/event/create_1.gsp (modified) * trunk/grails-app/views/event/create_auto.gsp (modified) * trunk/grails-app/views/event/create_timepicker.gsp (modified) * trunk/grails-app/views/event/edit.gsp (modified) * trunk/grails-app/views/event/list.gsp (modified) * trunk/grails-app/views/event/partial.gsp (modified) * trunk/grails-app/views/event/show.gsp (modified) * trunk/grails-app/views/exporter/index.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/importer/common/_ajaxflow.gsp (modified) * trunk/grails-app/views/importer/common/_datapreview.gsp (modified) * trunk/grails-app/views/importer/common/_error.gsp (modified) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/common/_navigation.gsp (modified) * trunk/grails-app/views/importer/common/_on_page.gsp (modified) * trunk/grails-app/views/importer/common/_page_footer.gsp (modified) * trunk/grails-app/views/importer/common/_page_header.gsp (modified) * trunk/grails-app/views/importer/common/_please_wait.gsp (modified) * trunk/grails-app/views/importer/common/_postview.gsp (modified) * trunk/grails-app/views/importer/common/_preview.gsp (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/common/_properties_vertical.gsp (modified) * trunk/grails-app/views/importer/common/_refresh_flow.gsp (modified) * trunk/grails-app/views/importer/common/_tabs.gsp (modified) * trunk/grails-app/views/importer/index.gsp (modified) * trunk/grails-app/views/importer/pages/_error.gsp (modified) * trunk/grails-app/views/importer/pages/_final_page.gsp (modified) * trunk/grails-app/views/importer/pages/_page_four.gsp (modified) * trunk/grails-app/views/importer/pages/_page_one.gsp (modified) * trunk/grails-app/views/importer/pages/_page_three.gsp (modified) * trunk/grails-app/views/importer/pages/_page_two.gsp (modified) * trunk/grails-app/views/layouts/dialog.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/layouts/nimble.gsp (modified) * trunk/grails-app/views/load/index.gsp (modified) * trunk/grails-app/views/login/auth.gsp (modified) * trunk/grails-app/views/login/denied.gsp (modified) * trunk/grails-app/views/person/create.gsp (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/create.gsp (modified) * trunk/grails-app/views/personAffiliation/edit.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personAffiliation/show.gsp (modified) * trunk/grails-app/views/personRole/create.gsp (modified) * trunk/grails-app/views/personRole/edit.gsp (modified) * trunk/grails-app/views/personRole/list.gsp (modified) * trunk/grails-app/views/personRole/show.gsp (modified) * trunk/grails-app/views/pilot/edit.gsp (modified) * trunk/grails-app/views/pilot/index.gsp (modified) * trunk/grails-app/views/pilot/list.gsp (modified) * trunk/grails-app/views/pilot/show.gsp (modified) * trunk/grails-app/views/publication/add.gsp (modified) * trunk/grails-app/views/publication/create.gsp (modified) * trunk/grails-app/views/publication/edit.gsp (modified) * trunk/grails-app/views/publication/list.gsp (modified) * trunk/grails-app/views/publication/show.gsp (modified) * trunk/grails-app/views/query/common/_error.gsp (modified) * trunk/grails-app/views/query/common/_navigation.gsp (modified) * trunk/grails-app/views/query/common/_query.gsp (modified) * trunk/grails-app/views/query/common/_tabs.gsp (modified) * trunk/grails-app/views/query/index.gsp (modified) * trunk/grails-app/views/query/mainPage.gsp (modified) * trunk/grails-app/views/query/pages/_biomarker.gsp (modified) * trunk/grails-app/views/query/pages/_group.gsp (modified) * trunk/grails-app/views/query/pages/_inputQuery.gsp (modified) * trunk/grails-app/views/query/pages/_result.gsp (modified) * trunk/grails-app/views/query/pages/_sample.gsp (modified) * trunk/grails-app/views/query/pages/_study.gsp (modified) * trunk/grails-app/views/query/results.gsp (modified) * trunk/grails-app/views/query/selectsample.gsp (modified) * trunk/grails-app/views/register/forgotPassword.gsp (modified) * trunk/grails-app/views/register/index.gsp (modified) * trunk/grails-app/views/register/resetPassword.gsp (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/searchable/index.gsp (modified) * trunk/grails-app/views/setup/common/_wizard.gsp (modified) * trunk/grails-app/views/setup/index.gsp (modified) * trunk/grails-app/views/setup/pages/_start.gsp (modified) * trunk/grails-app/views/simpleQuery/common/_query.gsp (modified) * trunk/grails-app/views/simpleQuery/mainPage.gsp (modified) * trunk/grails-app/views/study/create.gsp (modified) * trunk/grails-app/views/study/createTimelineBandsJs.gsp (modified) * trunk/grails-app/views/study/edit.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_assays.gsp (modified) * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/grails-app/views/study/show_events_timeline.gsp (modified) * trunk/grails-app/views/study/show_persons.gsp (modified) * trunk/grails-app/views/study/show_publications.gsp (modified) * trunk/grails-app/views/study/show_samples.gsp (modified) * trunk/grails-app/views/study/show_subjects.gsp (modified) * trunk/grails-app/views/studyWizard/common/_ajaxflow.gsp (modified) * trunk/grails-app/views/studyWizard/common/_error.gsp (modified) * trunk/grails-app/views/studyWizard/common/_navigation.gsp (modified) * trunk/grails-app/views/studyWizard/common/_on_page.gsp (modified) * trunk/grails-app/views/studyWizard/common/_page_footer.gsp (modified) * trunk/grails-app/views/studyWizard/common/_page_header.gsp (modified) * trunk/grails-app/views/studyWizard/common/_please_wait.gsp (modified) * 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trunk/grails-app/views/templateEditor/compare.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_available.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_disabledFieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_domainField.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_fieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liField.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldDomain.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldNotInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplate.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateNonEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_selected.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_templateForm.gsp (modified) * trunk/grails-app/views/templateEditor/error.gsp (modified) * trunk/grails-app/views/templateEditor/index.gsp (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) * trunk/grails-app/views/user/create.gsp (modified) * trunk/grails-app/views/user/edit.gsp (modified) * trunk/grails-app/views/user/search.gsp (modified) * trunk/grails-app/views/userRegistration/add.gsp (modified) * trunk/grails-app/views/userRegistration/confirmAdmin.gsp (modified) * trunk/grails-app/views/userRegistration/confirmUser.gsp (modified) * trunk/grails-app/views/userRegistration/index.gsp (modified) * trunk/grails-app/views/userRegistration/profile.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) * trunk/src/groovy/nl/metabolomicscentre/dsp/http/BasicAuthentication.groovy (modified) * trunk/src/java/config-ci.properties (modified) * trunk/src/java/config-dbnpdemo.properties (modified) * trunk/src/java/config-dbnptest.properties (modified) * trunk/src/java/config-development.properties (modified) * trunk/src/java/config-nmcdsptest.properties (modified) * trunk/src/java/config-production.properties (modified) * trunk/src/java/config-test.properties (modified) * trunk/src/java/config-www.properties (modified) * trunk/src/java/dbnp/data/CleanDataLayer.java (modified) * trunk/src/sass/_rounded.sass (modified) * trunk/src/sass/_uielements.sass (modified) * trunk/src/templates/artifacts/Controller.groovy (modified) * trunk/src/templates/artifacts/DomainClass.groovy (modified) * trunk/src/templates/artifacts/Filters.groovy (modified) * trunk/src/templates/artifacts/Script.groovy (modified) * trunk/src/templates/artifacts/Service.groovy (modified) * trunk/src/templates/artifacts/TagLib.groovy (modified) * trunk/src/templates/artifacts/Tests.groovy (modified) * trunk/src/templates/artifacts/WebTest.groovy (modified) * trunk/src/templates/scaffolding/Controller.groovy (modified) * trunk/src/templates/scaffolding/create.gsp (modified) * trunk/src/templates/scaffolding/edit.gsp (modified) * trunk/src/templates/scaffolding/list.gsp (modified) * trunk/src/templates/scaffolding/renderEditor.template (modified) * trunk/src/templates/scaffolding/show.gsp (modified) * trunk/src/templates/war/web.xml (modified) * trunk/test/integration/RestControllerTests.groovy (modified) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (modified) * trunk/test/integration/gscf/EventGroupTests.groovy (modified) * trunk/test/integration/gscf/OntologyTests.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) * trunk/test/integration/gscf/StudyTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) * trunk/test/unit/HomeControllerTests.groovy (modified) * trunk/test/unit/RestControllerTests.groovy (modified) * trunk/test/unit/SandboxControllerTests.groovy (modified) * trunk/test/unit/SearchableControllerTests.groovy (modified) * trunk/test/unit/StudyTests.groovy (modified) * trunk/test/unit/dbnp/authentication/AuthenticationServiceTests.groovy (modified) * trunk/test/unit/dbnp/authentication/GSCFUserDetailsServiceTests.groovy (modified) * trunk/test/unit/dbnp/authentication/GSCFUserDetailsTests.groovy (modified) * trunk/test/unit/dbnp/authentication/RegisterControllerTests.groovy (modified) * trunk/test/unit/dbnp/authentication/SessionAuthenticatedUserTests.groovy (modified) * trunk/test/unit/dbnp/authentication/UserTests.groovy (modified) * trunk/test/unit/dbnp/data/FeatureBaseTests.groovy (modified) * trunk/test/unit/dbnp/data/OntologyControllerTests.groovy (modified) * trunk/test/unit/dbnp/data/TermControllerTests.groovy (modified) * trunk/test/unit/dbnp/importer/CellTests.groovy (modified) * trunk/test/unit/dbnp/importer/ColumnTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImportRecordTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImporterControllerTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImporterServiceTests.groovy (modified) * trunk/test/unit/dbnp/importer/ImporterTagLibTests.groovy (modified) * trunk/test/unit/dbnp/query/CriterionTests.groovy (modified) * trunk/test/unit/dbnp/query/QueryControllerTests.groovy (modified) * trunk/test/unit/dbnp/query/SearchTests.groovy (modified) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayModuleControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventDescriptionTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventGroupTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/EventTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/FileControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/FileServiceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/GroupTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/OntologyTermTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/OntologyTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PersonAffiliationControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PersonControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PersonRoleControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/ProtocolInstanceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/ProtocolParameterTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/ProtocolTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/PublicationControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/RelTimeTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SampleTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SamplingEventTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SimpleQueryControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SubjectControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SubjectGroupTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/SubjectTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEditorControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEntityTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateFieldFileTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateFieldTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateStudyFieldTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TermEditorControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/WizardControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/WizardTagLibTests.groovy (modified) * trunk/test/unit/dbnp/user/AuthServiceTests.groovy (modified) * trunk/test/unit/gscf/SynchronizationServiceTests.groovy (modified) * trunk/test/webtest/conf/webtest.properties (modified) * trunk/test/webtest/gscf/CreateStudyWebTests.groovy (modified) * trunk/test/webtest/gscf/EditStudyWebTests.groovy (modified) - set keyword expansion Fri, 21 Jan 2011 18:37:02 GMT work@… [1426] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/LoadController.groovy (deleted) * trunk/grails-app/controllers/dbnp/data (deleted) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayModuleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/EventController.groovy (deleted) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SubjectController.groovy (deleted) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/data (deleted) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayModule.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldListItem.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (deleted) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/SynchronizationService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/lib/ontoCAT_v0.9.6.1.jar (deleted) * trunk/lib/xstream-1.3.1.jar (deleted) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) - Resolved part of improvement #225 - refactored the template model ... Fri, 21 Jan 2011 15:30:04 GMT robert@… [1424] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (added) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (added) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) * trunk/test/integration/dbnp/query (added) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (added) * trunk/test/unit/FeedbackControllerTests.groovy (deleted) * trunk/test/unit/dbnp/authentication/AuthenticateControllerTests.groovy (deleted) * trunk/test/unit/dbnp/authentication/AuthenticationTagLibTests.groovy (deleted) * trunk/test/unit/dbnp/clinicaldata (deleted) * trunk/test/unit/dbnp/query/CriterionTests.groovy (added) * trunk/test/unit/dbnp/query/SearchTests.groovy (modified) * trunk/test/unit/dbnp/query/StudySearchTests.groovy (added) * trunk/web-app/css/advancedQuery.css (modified) * trunk/web-app/js/advancedQuery.js (modified) Improved querying and created a possibility to search for assays Tue, 18 Jan 2011 19:41:42 GMT robert@… [1415] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (added) * trunk/grails-app/views/advancedQuery (added) * trunk/grails-app/views/advancedQuery/index.gsp (added) * trunk/grails-app/views/advancedQuery/results.gsp (added) * trunk/grails-app/views/advancedQuery/studyresults.gsp (added) * trunk/src/groovy/dbnp/query (added) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (added) * trunk/src/groovy/dbnp/query/Search.groovy (added) * trunk/src/groovy/dbnp/query/StudySearch.groovy (added) * trunk/test/unit/dbnp/query/SearchTests.groovy (added) * trunk/web-app/css/advancedQuery.css (added) * trunk/web-app/js/advancedQuery.js (added) First version of advanced querying Thu, 25 Nov 2010 09:56:40 GMT j.saito@… [1199] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Further streamlined CommunicationManager. It now builds fetches its ... Wed, 24 Nov 2010 10:47:41 GMT j.saito@… [1196] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Streamlined CommunicationManager and adjusted it to suit ... Thu, 28 Oct 2010 14:39:45 GMT j.saito@… [1010] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Ticket #57 - Unified getAssays and getAssay. Also, added ... Fri, 08 Oct 2010 12:47:23 GMT j.saito@… [934] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Adjusted CommunicationManager to match closer with ... Tue, 24 Aug 2010 15:26:25 GMT keesvb [835] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) added metabolomics assay examples, cleaned up RestController, changed ... Wed, 04 Aug 2010 12:59:30 GMT jahn [773] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added rest method for querying measurement values. Mon, 02 Aug 2010 09:30:43 GMT vinlud [755] * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/grails-app/views/simpleQuery/common/_query.gsp (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Sam module changes including rest interface, merging results, ... Fri, 16 Jul 2010 11:47:33 GMT jahn [657] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) The getSample rest resource now fetches Samples instead of Assays ... Tue, 13 Jul 2010 15:49:15 GMT jahn [649] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added five controller actions (RestController) and corresponding Rest ... Tue, 13 Jul 2010 11:32:05 GMT jahn [648] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Corrected error in example of documentation for Rest resource ... Mon, 12 Jul 2010 10:41:54 GMT jahn [646] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Fixed rest url. Fri, 09 Jul 2010 11:38:18 GMT jahn [645] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Minor changes. Fri, 09 Jul 2010 09:34:14 GMT jahn [644] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added enhanced REST wrapper method for querying SAM. Fri, 02 Jul 2010 07:39:48 GMT vinlud [641] * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Added dummy search function Thu, 01 Jul 2010 14:19:46 GMT jahn [636] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) * trunk/src/groovy/dbnp/rest/gscf (deleted) Updated CommunicationManager to support URL generation for SAM views. ... Tue, 29 Jun 2010 13:36:04 GMT jahn [631] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (deleted) * trunk/src/groovy/dbnp/rest/common (added) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (added) * trunk/src/groovy/dbnp/rest/gscf (added) * trunk/src/groovy/dbnp/rest/gscf/SAMtoGSCFRestWrapper.groovy (added) Cleaned up CommunicationManager and put it in uniform use and package ... Fri, 25 Jun 2010 12:03:22 GMT jahn [621] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Added java.net.URLEncoder.encode() to protect URL parameters. Fri, 25 Jun 2010 09:55:00 GMT jahn [615] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Made generating of SAM URLs more readable. Fri, 25 Jun 2010 08:39:24 GMT jahn [609] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Adjusted communication for SAM on NBX5. Fri, 25 Jun 2010 08:27:01 GMT jahn [608] * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (modified) Added methods supplying SAM urls. Thu, 10 Jun 2010 09:21:43 GMT jahn [553] * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (deleted) * trunk/src/groovy/dbnp/rest/CommunicationManager.groovy (added) Changed name of CCMCommunicationManager to CommunicationManager. Mon, 07 Jun 2010 09:13:51 GMT jahn [537] * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) Added empty method for providing query results of a query on Simple ... Thu, 03 Jun 2010 07:48:33 GMT jahn [515] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) REST resources for communicating with the Simple Assay Module. Fri, 28 May 2010 08:36:00 GMT jahn [491] * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) Removed obvious error that led to compile-time error. Fri, 28 May 2010 08:24:12 GMT jahn [490] * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (modified) Added connection to test server nbx5. Wed, 26 May 2010 15:40:41 GMT jahn [480] * trunk/grails-app/controllers/RestController.groovy (added) * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/src/groovy/dbnp (added) * trunk/src/groovy/dbnp/rest (added) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (added) * trunk/src/java/dbnp/data/CleanDataLayer.java (modified) Providing some methods for showing that REST/JSON actually works for ...