# # ChangeLog for trunk/grails-app # # Generated by Trac 1.0.2 # Jan 22, 2021, 5:51:59 PM Mon, 23 May 2011 10:45:18 GMT work@… [1862] * trunk/grails-app/views/home/index.gsp (modified) - fixed setup message on home page Mon, 23 May 2011 10:25:27 GMT work@… [1860] * trunk/application.properties (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) - whoops Mon, 23 May 2011 10:19:55 GMT work@… [1859] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/config-ci.properties (modified) * trunk/grails-app/conf/config-dbnptest.properties (modified) * trunk/grails-app/conf/config-nmcdsptest.properties (modified) * trunk/grails-app/conf/config-production.properties (modified) * trunk/grails-app/conf/config-test.properties (modified) * trunk/grails-app/conf/config-www.properties (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/generic/installation/SetupController.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/setup/pages/_database.gsp (modified) * trunk/grails-app/views/setup/pages/_email.gsp (modified) - resolves #185 Mon, 23 May 2011 09:45:38 GMT work@… [1858] * trunk/application.properties (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) - resolves #423 Mon, 23 May 2011 09:23:02 GMT work@… [1857] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - resolves #423 Mon, 23 May 2011 09:00:02 GMT work@… [1856] * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_events.gsp (modified) - resolves #442 Thu, 19 May 2011 14:42:49 GMT robert@… [1854] * trunk/grails-app/conf/config-ci.properties (modified) Disabled module cache for CI Thu, 19 May 2011 14:19:08 GMT s.h.sikkema@… [1853] * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) changed module communication HTTP method to "POST" to deal with ... Thu, 19 May 2011 14:02:01 GMT robert@… [1852] * trunk/grails-app/services/dbnp/modules/ModuleCommunicationService.groovy (modified) Improved module communication when no parameters are given Wed, 18 May 2011 16:48:49 GMT kees.vanbochove@… [1851] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) added sample template to generated sample name to make it easier to ... Mon, 16 May 2011 10:24:31 GMT work@… [1848] * trunk/grails-app/views/home/index.gsp (modified) - fixed /span /div issue in home view Fri, 13 May 2011 16:42:42 GMT work@… [1846] * trunk/grails-app/controllers/generic/installation/SetupController.groovy (modified) * trunk/grails-app/views/setup/common/_on_page.gsp (modified) * trunk/grails-app/views/setup/index.gsp (modified) * trunk/grails-app/views/setup/pages/_apache.gsp (added) * trunk/grails-app/views/setup/pages/_configuration_file_error.gsp (added) * trunk/grails-app/views/setup/pages/_configuration_location.gsp (modified) * trunk/grails-app/views/setup/pages/_configuration_path_error.gsp (added) * trunk/grails-app/views/setup/pages/_database.gsp (modified) * trunk/grails-app/views/setup/pages/_email.gsp (moved) * trunk/grails-app/views/setup/pages/_final_page.gsp (modified) * trunk/grails-app/views/setup/pages/_summary.gsp (moved) * trunk/web-app/css/templates.css (modified) - working version of the setup wizard, see #185 Thu, 12 May 2011 13:46:03 GMT s.h.sikkema@… [1841] * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/grails-app/views/assay/assayExport/compileExportData.gsp (modified) * trunk/grails-app/views/assay/assayExport/selectAssay.gsp (modified) * trunk/grails-app/views/assay/assayExport/selectFields.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) removed obsolete UI references to Excel. Fixed study data numbers not ... Thu, 12 May 2011 13:23:39 GMT work@… [1840] * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/web-app/js/removeWebflowExecutionFromMenu.js (added) * trunk/web-app/js/removeWebflowExecutionFromMenu.min.js (added) - resolves #435 Wed, 11 May 2011 16:16:26 GMT s.h.sikkema@… [1838] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) First version of study inferring in simple wizard (does not support ... Wed, 11 May 2011 14:35:23 GMT work@… [1836] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_samples.gsp (modified) - solves in part #423 Wed, 11 May 2011 10:56:03 GMT s.h.sikkema@… [1834] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) Study inferring ability (in progress) Tue, 10 May 2011 13:44:15 GMT s.h.sikkema@… [1830] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) Clarified error messages related to unreachable module; added ... Tue, 10 May 2011 10:15:38 GMT work@… [1829] * trunk/grails-app/views/common/_topnav.gsp (modified) minor indent Tue, 10 May 2011 09:36:53 GMT s.h.sikkema@… [1828] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) Fixed only being able to export to tab delimited; fixed 'null' values ... Mon, 09 May 2011 14:39:18 GMT s.h.sikkema@… [1827] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/grails-app/views/assay/assayExport/selectFields.gsp (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) added different assay export possibilities (tab delimited, csv (comma ... Mon, 09 May 2011 09:57:19 GMT work@… [1825] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_modify.gsp (modified) - resolves #424 Mon, 09 May 2011 09:23:03 GMT work@… [1823] * trunk/application.properties (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/web-app/css/default.css (modified) * trunk/web-app/js/topnav.js (modified) * trunk/web-app/js/topnav.min.js (modified) - fixed enhanced menu to make it work as expected Fri, 06 May 2011 15:42:27 GMT robert@… [1821] * trunk/grails-app/controllers/RestController.groovy (modified) Added HTTP status 500 when getAssays is called without proper parameters Fri, 06 May 2011 07:02:30 GMT t.w.abma@… [1817] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) - fixed typo in test method Thu, 05 May 2011 14:53:48 GMT robert@… [1816] * trunk/grails-app/controllers/dbnp/authentication/LogoutController.groovy (modified) Added 'returnUrl' parameter to /logout/remote to redirect the user ... Thu, 05 May 2011 14:50:15 GMT robert@… [1815] * trunk/grails-app/conf/BootStrap.groovy (modified) Commit to trigger CI deployment Thu, 05 May 2011 14:33:59 GMT robert@… [1814] * trunk/grails-app/conf/BootStrap.groovy (modified) Trigger CI deployment Thu, 05 May 2011 11:01:04 GMT robert@… [1813] * trunk/grails-app/controllers/RestController.groovy (modified) Added possibility to ask for all assays for the given module (without ... Wed, 04 May 2011 15:25:03 GMT kees.vanbochove@… [1812] * trunk/grails-app/conf/dbnp/configuration/BootStrapAuthentication.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) restructured navigation menu, added debug line for adding users Wed, 04 May 2011 14:39:01 GMT s.h.sikkema@… [1811] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) study design inferring in progress Wed, 04 May 2011 14:32:04 GMT work@… [1810] * trunk/application.properties (modified) * trunk/grails-app/views/importer/index.gsp (modified) * trunk/grails-app/views/layouts/dialog.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/layouts/nimble.gsp (modified) * trunk/grails-app/views/simpleWizard/_javascripts.gsp (modified) * trunk/grails-app/views/studyWizard/index.gsp (modified) * trunk/web-app/css/advancedQuery.min.css (added) * trunk/web-app/css/ajaxflow.min.css (added) * trunk/web-app/css/buttons.min.css (added) * trunk/web-app/css/dbnp_style.min.css (added) * trunk/web-app/css/default.min.css (added) * trunk/web-app/css/default_style.min.css (added) * trunk/web-app/css/grailsDefault.min.css (added) * trunk/web-app/css/importer.min.css (added) * trunk/web-app/css/login_panel.min.css (added) * trunk/web-app/css/nimble.min.css (added) * trunk/web-app/css/nmcdsp_style.min.css (added) * trunk/web-app/css/setupwizard.min.css (added) * trunk/web-app/css/simpleQuery.min.css (added) * trunk/web-app/css/simplewizard.min.css (added) * trunk/web-app/css/studies.min.css (added) * trunk/web-app/css/studywizard.min.css (added) * trunk/web-app/css/templateImporter.min.css (added) * trunk/web-app/css/templates.min.css (added) * trunk/web-app/js/advancedQuery.min.js (added) * trunk/web-app/js/advancedQueryResults.min.js (added) * trunk/web-app/js/ajaxupload.3.6.min.js (added) * trunk/web-app/js/disableKeys.min.js (added) * trunk/web-app/js/highcharts.min.js (added) * trunk/web-app/js/jquery-callback-1.2.min.js (added) * trunk/web-app/js/login_panel.min.js (added) * trunk/web-app/js/paginate.min.js (added) * trunk/web-app/js/publication-chooser.min.js (added) * trunk/web-app/js/publication-chooser.pubmed.min.js (added) * trunk/web-app/js/simpleWizard.min.js (added) * trunk/web-app/js/studywizard.min.js (added) * trunk/web-app/js/topnav.min.js (added) - added minified css / js support - gdt up to 0.0.41 (minified) Wed, 04 May 2011 13:20:28 GMT work@… [1809] * trunk/application.properties (modified) * trunk/grails-app/views/studyWizard/common/_page_header.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_assay_groups.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_assays.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_events.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_groups.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_samples.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_subjects.gsp (modified) * trunk/web-app/js/studywizard.js (modified) - new rewritten table editor (gdt 0.0.40) Wed, 04 May 2011 12:42:42 GMT work@… [1808] * trunk/grails-app/views/studyWizard/common/_page_header.gsp (modified) - developmental commit of table editor Wed, 04 May 2011 11:06:50 GMT work@… [1807] * trunk/grails-app/views/studyWizard/common/_page_header.gsp (modified) * trunk/web-app/js/studywizard.js (modified) - developmental commit of table editor Wed, 04 May 2011 07:53:40 GMT s.h.sikkema@… [1803] * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) Improved CSV export Tue, 03 May 2011 12:33:45 GMT robert@… [1802] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/web-app/css/simplewizard.css (modified) * trunk/web-app/js/studywizard.js (modified) Solved styling issues with required contacts in simplewizard, ... Mon, 02 May 2011 15:03:36 GMT robert@… [1800] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/src/groovy/dbnp/query/StudySearch.groovy (modified) Implemented searching in 'all fields' Mon, 02 May 2011 10:38:14 GMT robert@… [1799] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) Adjusted assay exporting to use CSV export method Mon, 02 May 2011 09:55:13 GMT robert@… [1798] * trunk (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/advancedQuery/_resultbuttons.gsp (modified) * trunk/grails-app/views/advancedQuery/assayresults.gsp (modified) * trunk/grails-app/views/advancedQuery/results.gsp (modified) * trunk/grails-app/views/advancedQuery/sampleresults.gsp (modified) * trunk/grails-app/views/advancedQuery/studyresults.gsp (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/web-app/js/advancedQueryResults.js (modified) After searching, several actions can be performed on search results. ... Thu, 28 Apr 2011 13:33:45 GMT work@… [1794] * trunk/application.properties (modified) * trunk/grails-app/controllers/StudyXMLController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/RegisterController.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonAffiliationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonRoleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/views/simpleWizard/_javascripts.gsp (modified) * trunk/grails-app/views/studyWizard/index.gsp (modified) * trunk/web-app/js/studywizard.js (modified) - added support for fuzzymatching (resolves #418) - removed debug ... Wed, 27 Apr 2011 12:40:53 GMT robert@… [1793] * trunk/grails-app/views/studyWizard/pages/_subjects.gsp (modified) After the problems with SVN and the r1791 commit from Jeroen, the ... Wed, 27 Apr 2011 12:35:16 GMT robert@… [1792] * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/views/study/show_assays.gsp (modified) Adjusted study view to show only a few samples if the list is very large Wed, 27 Apr 2011 10:10:16 GMT work@… [1791] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_subjects.gsp (modified) RE-committed Robert's change after the SVN was fixed, original commit ... Thu, 21 Apr 2011 13:49:23 GMT s.h.sikkema@… [1790] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/grails-app/views/assay/assayExport (moved) * trunk/grails-app/views/assay/assayExport/compileExportData.gsp (modified) * trunk/grails-app/views/assay/assayExport/selectAssay.gsp (modified) * trunk/grails-app/views/assay/assayExport/selectFields.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) fixed bug where preview of small export would fail; changed assay ... Thu, 21 Apr 2011 12:33:49 GMT t.w.abma@… [1787] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - added null-check to Study domain when using toString()-method Tue, 26 Apr 2011 08:01:50 GMT robert@… [1786] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_subjects.gsp (modified) Added Environmental Ontology (1069) to the subject.species field, to ... Thu, 21 Apr 2011 12:08:02 GMT t.w.abma@… [1785] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - changed toString()-method of Study, now returns code AND title ... Thu, 21 Apr 2011 10:19:17 GMT t.w.abma@… [1784] * trunk/application.properties (modified) * trunk/grails-app/conf/Config.groovy (modified) - added configuration variables for gdtImporter - upgraded ... Wed, 20 Apr 2011 14:31:27 GMT robert@… [1783] * trunk/grails-app/services/dbnp/authentication/AuthenticationService.groovy (modified) Extended the time a user is logged in, in order to facilitate huge ... Wed, 20 Apr 2011 12:27:00 GMT work@… [1782] * trunk/application.properties (modified) * trunk/grails-app/views/studyWizard/pages/_events.gsp (modified) * trunk/web-app/css/default.css (modified) * trunk/web-app/images/inputboxes (added) * trunk/web-app/images/inputboxes/box-grad.png (added) * trunk/web-app/images/inputboxes/check-off.png (added) * trunk/web-app/images/inputboxes/check-on.png (added) * trunk/web-app/images/inputboxes/radio-off.png (added) * trunk/web-app/images/inputboxes/radio-on.png (added) - resolved #93, improved seperation of events / sampling events in ... Wed, 20 Apr 2011 09:57:14 GMT robert@… [1781] * trunk/grails-app/controllers/RestController.groovy (modified) Added support in RestController for distinction between ... Wed, 20 Apr 2011 09:18:45 GMT robert@… [1780] * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/web-app/css/advancedQuery.css (modified) * trunk/web-app/js/advancedQuery.js (modified) Improved querying user interface Tue, 19 Apr 2011 15:36:04 GMT work@… [1779] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - set proper content-type header for reltime in the wizard Tue, 19 Apr 2011 15:05:03 GMT work@… [1778] * trunk/grails-app/i18n/messages.properties (modified) - added i18n message for study title uniqueness Tue, 19 Apr 2011 14:54:46 GMT work@… [1777] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - first() does not seem to work properly on hibernate lazily fetched ... Tue, 19 Apr 2011 14:35:56 GMT work@… [1776] * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - resolves #401, study title should be unique Tue, 19 Apr 2011 14:12:15 GMT work@… [1775] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/i18n/messages.properties (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_study.gsp (modified) - resolves #400, study should contain at least one contact Tue, 19 Apr 2011 13:28:58 GMT work@… [1774] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - resolves #398 Mon, 18 Apr 2011 10:32:07 GMT robert@… [1773] * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) Solved redirect bug in login controller Mon, 18 Apr 2011 10:25:47 GMT robert@… [1772] * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/web-app/css/dbnp_style.css (modified) * trunk/web-app/css/default.css (added) * trunk/web-app/css/default_style.css (modified) * trunk/web-app/css/nmcdsp_style.css (modified) * trunk/web-app/images/dbnp_style/body_bg_155px.gif (deleted) * trunk/web-app/images/dbnp_style/body_bg_95px.gif (deleted) * trunk/web-app/images/dbnp_style/header_120px.png (deleted) * trunk/web-app/images/dbnp_style/login_panel (deleted) * trunk/web-app/images/dbnp_style/tables (deleted) * trunk/web-app/images/dbnp_style/topnav (deleted) * trunk/web-app/images/nmcdsp_style/body_bg_155px.gif (deleted) * trunk/web-app/images/nmcdsp_style/body_bg_95px.gif (deleted) * trunk/web-app/images/nmcdsp_style/header_120px.png (deleted) * trunk/web-app/images/nmcdsp_style/login_panel (deleted) * trunk/web-app/images/nmcdsp_style/tables (deleted) * trunk/web-app/images/nmcdsp_style/topnav (deleted) Refactored stylesheets to avoid duplicate code. See #411 Mon, 18 Apr 2011 09:27:03 GMT robert@… [1771] * trunk/grails-app/views/template/handleImportedFile.gsp (modified) * trunk/grails-app/views/template/saveImportedTemplates.gsp (modified) * trunk/web-app/css/templateImporter.css (added) Fixed bug with stylesheet in template importer Wed, 13 Apr 2011 12:57:42 GMT robert@… [1770] * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) Improved logging in from modules Wed, 13 Apr 2011 09:51:47 GMT robert@… [1769] * trunk/grails-app/views/study/show_events_table.gsp (modified) * trunk/grails-app/views/study/show_samples.gsp (modified) Added fields to study view and fixed strange values for parentEvent ... Tue, 12 Apr 2011 14:21:26 GMT robert@… [1768] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/createTimelineBandsJs.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/web-app/css/dbnp_style.css (modified) * trunk/web-app/css/default_style.css (modified) * trunk/web-app/css/nmcdsp_style.css (modified) Solved small issues with study view Tue, 12 Apr 2011 13:47:03 GMT work@… [1765] * trunk/grails-app/views/info/index.gsp (modified) - added anchor Tue, 12 Apr 2011 13:36:04 GMT work@… [1764] * trunk/grails-app/controllers/generic/InfoController.groovy (added) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/info (added) * trunk/grails-app/views/info/index.gsp (added) * trunk/test/unit/generic (added) * trunk/test/unit/generic/InfoControllerTests.groovy (added) - created an info controller displaying application / plugin ... Tue, 12 Apr 2011 13:16:25 GMT work@… [1763] * trunk/grails-app/views/home/index.gsp (modified) * trunk/web-app/downloads (added) * trunk/web-app/downloads/quickstart_dbnp_style.pdf (added) * trunk/web-app/downloads/quickstart_default_style.pdf (added) * trunk/web-app/downloads/quickstart_nmcdsp_style.pdf (added) - added quickstart guides Tue, 12 Apr 2011 13:04:54 GMT work@… [1762] * trunk/grails-app/conf/BaseFilters.groovy (modified) - apparently, the hostname on dbnp.org is nbx14 and not dbnp.org.... Tue, 12 Apr 2011 12:36:36 GMT s.h.sikkema@… [1761] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) assay excel export now writes to a temporary file first to prevent ... Tue, 12 Apr 2011 11:12:13 GMT work@… [1758] * trunk/grails-app/views/home/index.gsp (modified) - makes no sense showing a statistics box if there is nothing to show Tue, 12 Apr 2011 11:07:51 GMT s.h.sikkema@… [1757] * trunk/application.properties (modified) * trunk/grails-app/views/studyWizard/pages/_confirmation.gsp (modified) fixed typo; updated jumpbar Tue, 12 Apr 2011 10:43:35 GMT work@… [1756] * trunk/grails-app/views/home/index.gsp (modified) - makes no sense showing a statistics box if there is nothing to show Tue, 12 Apr 2011 10:27:20 GMT work@… [1755] * trunk/grails-app/views/home/index.gsp (modified) - makes no sense showing a statistics box if there is nothing to show Tue, 12 Apr 2011 10:14:59 GMT work@… [1754] * trunk/grails-app/conf/config-www.properties (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) - removed default user from www config - trying to fix the ... Tue, 12 Apr 2011 10:04:06 GMT work@… [1753] * trunk/grails-app/controllers/HomeController.groovy (modified) homecontroller breaks if database is empty Mon, 11 Apr 2011 14:02:04 GMT robert@… [1752] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) Updated assay export to be able to export multiple assays or studies ... Mon, 11 Apr 2011 09:54:11 GMT work@… [1744] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - wizard 'studyPrevious' page did not handle 'quickSave' Mon, 11 Apr 2011 09:45:46 GMT work@… [1743] * trunk/grails-app/views/home/index.gsp (modified) - added plugin information for ci Mon, 11 Apr 2011 08:55:28 GMT work@… [1741] * trunk/grails-app/conf/Config.groovy (modified) - changed file upload definition logic Mon, 11 Apr 2011 08:46:19 GMT work@… [1739] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/views/common/_info.gsp (modified) * trunk/web-app/css/dbnp_style.css (added) * trunk/web-app/css/nmcdsp_style.css (added) * trunk/web-app/images/dbnp_style (added) * trunk/web-app/images/dbnp_style/body_bg_155px.gif (added) * trunk/web-app/images/dbnp_style/body_bg_95px.gif (added) * trunk/web-app/images/dbnp_style/header_120px.png (added) * trunk/web-app/images/dbnp_style/header_60px.png (added) * trunk/web-app/images/dbnp_style/login_panel (added) * trunk/web-app/images/dbnp_style/login_panel/Thumbs.db (added) * trunk/web-app/images/dbnp_style/login_panel/bg.jpg (added) * trunk/web-app/images/dbnp_style/login_panel/bt_close.png (added) * trunk/web-app/images/dbnp_style/login_panel/bt_login.png (added) * trunk/web-app/images/dbnp_style/login_panel/bt_open.png (added) * trunk/web-app/images/dbnp_style/login_panel/bt_register.png (added) * trunk/web-app/images/dbnp_style/login_panel/tab_b.png (added) * trunk/web-app/images/dbnp_style/login_panel/tab_l.png (added) * trunk/web-app/images/dbnp_style/login_panel/tab_m.png (added) * trunk/web-app/images/dbnp_style/login_panel/tab_r.png (added) * trunk/web-app/images/dbnp_style/tables (added) * trunk/web-app/images/dbnp_style/tables/shadow.jpg (added) * trunk/web-app/images/dbnp_style/tables/sorted_asc.gif (added) * trunk/web-app/images/dbnp_style/tables/sorted_desc.gif (added) * trunk/web-app/images/dbnp_style/topnav (added) * trunk/web-app/images/dbnp_style/topnav/dropdown_linkbg.gif (added) * trunk/web-app/images/dbnp_style/topnav/header_bg.gif (added) * trunk/web-app/images/dbnp_style/topnav/subnav_btn.gif (added) * trunk/web-app/images/dbnp_style/topnav/topnav_bg.gif (added) * trunk/web-app/images/dbnp_style/topnav/topnav_hover.gif (added) * trunk/web-app/images/nmcdsp_style (added) * trunk/web-app/images/nmcdsp_style/body_bg_155px.gif (added) * trunk/web-app/images/nmcdsp_style/body_bg_95px.gif (added) * trunk/web-app/images/nmcdsp_style/header_120px.png (added) * trunk/web-app/images/nmcdsp_style/header_60px.png (added) * trunk/web-app/images/nmcdsp_style/login_panel (added) * trunk/web-app/images/nmcdsp_style/login_panel/bg.jpg (added) * trunk/web-app/images/nmcdsp_style/login_panel/bt_close.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/bt_login.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/bt_open.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/bt_register.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/tab_b.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/tab_l.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/tab_m.png (added) * trunk/web-app/images/nmcdsp_style/login_panel/tab_r.png (added) * trunk/web-app/images/nmcdsp_style/tables (added) * trunk/web-app/images/nmcdsp_style/tables/shadow.jpg (added) * trunk/web-app/images/nmcdsp_style/tables/sorted_asc.gif (added) * trunk/web-app/images/nmcdsp_style/tables/sorted_desc.gif (added) * trunk/web-app/images/nmcdsp_style/topnav (added) * trunk/web-app/images/nmcdsp_style/topnav/dropdown_linkbg.gif (added) * trunk/web-app/images/nmcdsp_style/topnav/header_bg.gif (added) * trunk/web-app/images/nmcdsp_style/topnav/subnav_btn.gif (added) * trunk/web-app/images/nmcdsp_style/topnav/topnav_bg.gif (added) * trunk/web-app/images/nmcdsp_style/topnav/topnav_hover.gif (added) - added style definitions for nmcdsp.org and dbnp.org Fri, 08 Apr 2011 14:49:27 GMT work@… [1738] * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) fixed indentation Fri, 08 Apr 2011 14:03:23 GMT work@… [1736] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) - resolves issue #384, studyPerson, publications and users are not ... Fri, 08 Apr 2011 13:43:15 GMT work@… [1735] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) - removed debug line Fri, 08 Apr 2011 13:40:27 GMT work@… [1734] * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) - hudson tests fail because 'log' is not available... changed to ... Fri, 08 Apr 2011 13:24:17 GMT work@… [1733] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - uncommented study save try/catch block Fri, 08 Apr 2011 12:13:21 GMT work@… [1732] * trunk/application.properties (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - resolved an issue with identity (ticket #367) Fri, 08 Apr 2011 11:17:27 GMT robert@… [1731] * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) Bugfix with the order of samples in the assay exporter Fri, 08 Apr 2011 10:07:56 GMT s.h.sikkema@… [1730] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) Excel export uses getMeasurements rest call; made assay export ... Fri, 08 Apr 2011 09:30:32 GMT robert@… [1729] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) Fixed bug in simpletox exporter with exporting multiple studies. Thu, 07 Apr 2011 14:02:26 GMT s.h.sikkema@… [1728] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) Changed max parameter from type int to Integer Thu, 07 Apr 2011 13:57:59 GMT robert@… [1727] * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) Adjusted assayservice to make exporting assays work with the ... Thu, 07 Apr 2011 12:50:12 GMT s.h.sikkema@… [1724] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) changed Study.give[Readable,Writable]Studies to make max parameter ... Thu, 07 Apr 2011 12:25:58 GMT work@… [1722] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - fixed UTF-8 issues (issue #235 ) Thu, 07 Apr 2011 09:21:23 GMT work@… [1719] * trunk/grails-app/i18n/messages_nl.properties (modified) - changed Dutch texts into English.... #243 Thu, 07 Apr 2011 08:52:17 GMT work@… [1718] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) commented out the try catch block to debug properly Wed, 06 Apr 2011 15:24:14 GMT robert@… [1717] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/views/advancedQuery/_criteria.gsp (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/src/groovy/dbnp/query/Criterion.groovy (modified) * trunk/src/groovy/dbnp/query/SampleSearch.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/web-app/css/default_style.css (modified) Implemented searching for 'any field' in advanced query Wed, 06 Apr 2011 14:40:13 GMT s.h.sikkema@… [1716] * trunk (modified) * trunk/application.properties (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/grails-app/views/assay/excelExport (added) * trunk/grails-app/views/assay/excelExport/compileExportData.gsp (moved) * trunk/grails-app/views/assay/excelExport/errorPage.gsp (added) * trunk/grails-app/views/assay/excelExport/selectAssay.gsp (moved) * trunk/grails-app/views/assay/excelExport/selectFields.gsp (moved) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/test/unit/dbnp/studycapturing/AssayControllerTests.groovy (modified) new gdtImporter; new jumpbar; excel export to webflow; fixed spelling ... Wed, 06 Apr 2011 10:30:30 GMT work@… [1715] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - removed debug lines Wed, 06 Apr 2011 10:00:37 GMT work@… [1714] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) using getText instead