# # ChangeLog for trunk/grails-app # # Generated by Trac 1.0.2 # Jan 22, 2021, 10:52:51 PM Tue, 30 Nov 2010 14:56:07 GMT t.w.abma@… [1223] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/step4.gsp (modified) - improved error messaging in the last step of the wizard Tue, 30 Nov 2010 13:10:42 GMT robert@… [1222] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) Implemented improved authorisation to give administrators all ... Tue, 30 Nov 2010 12:30:44 GMT work@… [1221] * trunk/grails-app/views/common/_info.gsp (modified) * trunk/web-app/css/default_style.css (modified) - improved build header Tue, 30 Nov 2010 09:53:15 GMT adem.bilican@… [1220] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) error in the SimpleTox exporter for parentSubject attribut Tue, 30 Nov 2010 09:50:36 GMT adem.bilican@… [1219] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) error in the SimpleTox exporter for parentSubject attribut Tue, 30 Nov 2010 09:45:55 GMT adem.bilican@… [1218] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) error in the SimpleTox exporter Tue, 30 Nov 2010 09:40:34 GMT adem.bilican@… [1217] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/views/exporter/index.gsp (modified) error in the SimpleTox exporter Tue, 30 Nov 2010 08:37:37 GMT t.w.abma@… [1216] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - step 3 (mapping properties) added simple error message telling what ... Tue, 30 Nov 2010 08:28:59 GMT t.w.abma@… [1215] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - step 3 (mapping properties) now requires all fields to be valid ... Mon, 29 Nov 2010 15:56:48 GMT robert@… [1213] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/study/createTimelineBandsJs.gsp (added) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_assays.gsp (added) * trunk/grails-app/views/study/show_events_table.gsp (added) * trunk/grails-app/views/study/show_events_timeline.gsp (added) * trunk/grails-app/views/study/show_persons.gsp (added) * trunk/grails-app/views/study/show_publications.gsp (added) * trunk/grails-app/views/study/show_samples.gsp (added) * trunk/grails-app/views/study/show_subjects.gsp (added) * trunk/web-app/js/timeline-simile/relative-time.js (modified) Improved the study overview page such that the different tabs are ... Mon, 29 Nov 2010 15:48:27 GMT work@… [1212] * trunk/grails-app/views/wizard/common/_navigation.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) - resolving issue # 209, study title to title tags Mon, 29 Nov 2010 10:38:52 GMT adem.bilican@… [1210] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) modifying the simple tox file name because of errors Fri, 26 Nov 2010 17:36:36 GMT work@… [1208] * trunk/application.properties (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) - obsolete import in sanbox controller broke gscf - added ajax-flow ... Fri, 26 Nov 2010 12:02:51 GMT t.w.abma@… [1207] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/step4.gsp (modified) - added an initial simple overview in last step of import wizard ... Fri, 26 Nov 2010 11:33:32 GMT robert@… [1206] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) Removed sorting of subjects in study page and added units to the ... Fri, 26 Nov 2010 09:43:44 GMT t.w.abma@… [1205] * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - removed obsolete code Thu, 25 Nov 2010 16:33:23 GMT m.s.vanvliet@… [1204] * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) Syncs all samples for assays on load Pilot/Show... Thu, 25 Nov 2010 16:26:07 GMT robert@… [1203] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/js/timeline-simile/custom-timeline.js (modified) * trunk/web-app/js/timeline-simile/relative-time.js (added) Updated the events timeline in the study view, according to ticket #72 Thu, 25 Nov 2010 14:51:14 GMT t.w.abma@… [1202] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/step3_simple.gsp (modified) - removed extra step and implemented a failed cells check in step 3 ... Thu, 25 Nov 2010 13:11:08 GMT robert@… [1201] * trunk/grails-app/views/study/show.gsp (modified) Made the size of the subjects column in the events table overview ... Thu, 25 Nov 2010 12:56:54 GMT robert@… [1200] * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/studies.css (modified) Improved study overview of events according to ticket #199 Thu, 25 Nov 2010 09:56:40 GMT j.saito@… [1199] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Further streamlined CommunicationManager. It now builds fetches its ... Wed, 24 Nov 2010 16:21:28 GMT t.e.roos@… [1198] * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) Added workarounds for known template text fields bug Wed, 24 Nov 2010 16:10:37 GMT business@… [1197] * trunk/grails-app/controllers/dbnp/clinicaldata (deleted) * trunk/grails-app/domain/dbnp/clinicaldata (deleted) * trunk/grails-app/domain/dbnp/data/FeatureBase.groovy (deleted) * trunk/grails-app/domain/dbnp/data/FeatureType.groovy (deleted) * trunk/grails-app/services/dbnp/clinicaldata (deleted) deleted old clinical module stuff, don't know why it is still in... Wed, 24 Nov 2010 10:47:41 GMT j.saito@… [1196] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Streamlined CommunicationManager and adjusted it to suit ... Tue, 23 Nov 2010 13:07:41 GMT j.saito@… [1195] * trunk/grails-app/conf/BootStrap.groovy (modified) Fixed bug. Someone called the wrong CommunicationManager method. Tue, 23 Nov 2010 12:59:12 GMT t.w.abma@… [1194] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - removed debug line Tue, 23 Nov 2010 12:50:40 GMT t.w.abma@… [1193] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - refresh error when calling savePostview now really shouldn't popup ... Tue, 23 Nov 2010 11:37:18 GMT work@… [1192] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - looking into #187 which is reproducable on ci, but not on dev. ... Tue, 23 Nov 2010 10:17:00 GMT t.w.abma@… [1191] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - calling savePostview url directly gives a warning now that the ... Tue, 23 Nov 2010 09:15:07 GMT t.w.abma@… [1190] * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - removed debugging info Tue, 23 Nov 2010 08:47:15 GMT robert@… [1188] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) Fixed deletion of studies (see ticket #201) Mon, 22 Nov 2010 18:19:58 GMT t.w.abma@… [1187] * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - fixed transient and `samples.name` error (the latter was caused by ... Mon, 22 Nov 2010 18:12:20 GMT work@… [1186] * trunk/grails-app/views/wizard/pages/_demo.gsp (modified) - added some more ontology fields to the demo page in the wizard to ... Mon, 22 Nov 2010 16:27:23 GMT robert@… [1182] * trunk/grails-app/controllers/dbnp/studycapturing/FileController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/wizard.css (modified) * trunk/web-app/js/wizard.js (modified) Improved file upload fields so users can delete existing files and ... Mon, 22 Nov 2010 16:06:54 GMT work@… [1181] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/i18n/messages_nl.properties (modified) * trunk/grails-app/views/study/list.gsp (modified) - resolved issue #180, added links to directly edit or view studies ... Mon, 22 Nov 2010 15:33:42 GMT work@… [1180] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - enabling quicksave through the wizard // since this controller ... Fri, 19 Nov 2010 12:34:22 GMT work@… [1179] * trunk/grails-app/conf/BootStrap.groovy (modified) - set other url's in the communication manager as well, not sure if ... Fri, 19 Nov 2010 12:19:00 GMT work@… [1178] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) - this change is part of #185 - moved object instantes out of ... Fri, 19 Nov 2010 11:31:15 GMT work@… [1177] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - removed debug println Fri, 19 Nov 2010 11:19:29 GMT work@… [1176] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) - resolved issue #187 by refactoring the TermEditor to support the ... Fri, 19 Nov 2010 10:51:09 GMT robert@… [1175] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/templateEditor/elements/_disabledFieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_fieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldNotInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) The templateeditor is now capable of adding new items to a stringlist ... Fri, 19 Nov 2010 09:55:15 GMT work@… [1174] * trunk/grails-app/domain/dbnp/data/Ontology.groovy (modified) * trunk/lib/ontoCAT_v0.9.5.3.jar (deleted) * trunk/lib/ontoCAT_v0.9.6.jar (added) As of 18 november the Chebi ontology has been updated to a new ... Thu, 18 Nov 2010 15:31:30 GMT business@… [1173] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) fix another typo which broke study edit wizard Thu, 18 Nov 2010 15:27:02 GMT t.w.abma@… [1172] * trunk/grails-app/views/importer/index_simple.gsp (modified) - minor refresh fix Thu, 18 Nov 2010 14:20:10 GMT t.w.abma@… [1171] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) - added add / modify to date template chooser - added some JS to ... Thu, 18 Nov 2010 13:51:09 GMT business@… [1170] * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) reverting the searchable property of Event, bug is still there and ... Thu, 18 Nov 2010 13:16:29 GMT business@… [1169] * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) fix for #128 - parentEvent is now nullable Thu, 18 Nov 2010 12:10:23 GMT business@… [1168] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) fix typo which broke study create wizard Thu, 18 Nov 2010 11:13:07 GMT robert@… [1167] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/i18n/messages.properties (modified) Added a check for string template fields, because they can not exceed ... Thu, 18 Nov 2010 10:26:28 GMT robert@… [1166] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/templateEditor/elements/_float.gsp (deleted) * trunk/grails-app/views/templateEditor/elements/_integer.gsp (deleted) Removed INTEGER/FLOAT templates from template editor and changed the ... Thu, 18 Nov 2010 10:21:53 GMT t.w.abma@… [1165] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - removed INTEGER/FLOAT support in the Import Wizard controller and ... Thu, 18 Nov 2010 09:10:26 GMT t.w.abma@… [1164] * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - removed INTEGER/FLOAT support in the Import Wizard and replaced ... Thu, 18 Nov 2010 08:35:37 GMT m.s.vanvliet@… [1163] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) Wrong port + URL for metabolomics module was set in Bootstrap. ... Wed, 17 Nov 2010 17:05:04 GMT work@… [1162] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - resolves improvement #1, generating an assay id suggestion in the ... Wed, 17 Nov 2010 16:33:54 GMT work@… [1161] * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) - tried to reproduce issue #128 but it seems resolved, leaving ... Wed, 17 Nov 2010 15:23:13 GMT robert@… [1160] * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) Removed printlns that were added for debugging Wed, 17 Nov 2010 15:20:33 GMT robert@… [1159] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/templateEditor/_ontologyDialog.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldNotInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateNonEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_selected.gsp (modified) * trunk/grails-app/views/templateEditor/index.gsp (modified) * trunk/grails-app/views/user/edit.gsp (modified) Improved the template editor so that template fields can be removed ... Wed, 17 Nov 2010 13:31:57 GMT robert@… [1157] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) Removed unnecessary REST call from term editor Wed, 17 Nov 2010 13:12:48 GMT work@… [1155] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_samples.gsp (modified) - resolving issue #195, sample generation madness. This was partly ... Wed, 17 Nov 2010 10:52:10 GMT robert@… [1154] * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) Fixed exception when viewing the list of persons. See ticket #196. Wed, 17 Nov 2010 10:34:09 GMT robert@… [1153] * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) Removed template field types INTEGER and FLOAT (since LONG and DOUBLE ... Wed, 17 Nov 2010 09:45:55 GMT robert@… [1152] * trunk/grails-app/controllers/dbnp/authentication/RegisterController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserController.groovy (modified) * trunk/grails-app/views/register/forgotPassword.gsp (modified) * trunk/grails-app/views/user/edit.gsp (modified) Changed flash.error to flash.userError in the authentication part to ... Tue, 16 Nov 2010 17:48:08 GMT work@… [1150] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) - resolves issue #180 Tue, 16 Nov 2010 17:30:11 GMT work@… [1149] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/common/_error.gsp (modified) - resolving issue #197 where the study wizard breaks is flash.errors ... Tue, 16 Nov 2010 15:47:18 GMT t.w.abma@… [1148] * trunk/grails-app/views/importer/index_simple.gsp (modified) - multiselect and add/remove added, only entity needs to be passed (todo) Tue, 16 Nov 2010 14:47:30 GMT robert@… [1147] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/i18n/messages.spring-security-ui.properties (modified) Resolved exception with the RegisterCommand Tue, 16 Nov 2010 14:16:35 GMT business@… [1146] * trunk/grails-app/views/wizard/pages/_samples.gsp (modified) enlarge column width for sample name in study create/edit wizard Tue, 16 Nov 2010 13:57:22 GMT robert@… [1144] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/RegistrationCode.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/i18n/messages.spring-security-ui.properties (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/email/_registrationConfirmationUser.gsp (modified) * trunk/grails-app/views/userRegistration/index.gsp (modified) * trunk/web-app/css/login_panel.css (modified) Added an expiry date to the confirmation email for the user and ... Tue, 16 Nov 2010 10:47:46 GMT t.w.abma@… [1143] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) - import wizard: fuzzy matching for column properties (step 2) ... Tue, 16 Nov 2010 09:43:41 GMT t.w.abma@… [1142] * trunk/grails-app/views/importer/step4.gsp (modified) - "go back" link not shown in the last step of the wizard, if no ... Mon, 15 Nov 2010 22:10:37 GMT t.w.abma@… [1141] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) - added fuzzy matching to importer tag library Mon, 15 Nov 2010 19:25:49 GMT t.w.abma@… [1140] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - added ability to add new ontologies in the "missing properties" step Mon, 15 Nov 2010 12:36:42 GMT robert@… [1138] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/i18n/messages.spring-security-ui.properties (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/userRegistration/add.gsp (modified) * trunk/grails-app/views/userRegistration/index.gsp (modified) * trunk/grails-app/views/userRegistration/profile.gsp (added) Implemented ability to changed password and email address when logged ... Mon, 15 Nov 2010 11:52:12 GMT t.w.abma@… [1137] * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - missing properties added Add ontology... Mon, 15 Nov 2010 10:06:45 GMT robert@… [1136] * trunk/application.properties (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) * trunk/web-app/css/templateEditor.css (modified) * trunk/web-app/js/templateEditor.js (modified) Improved template editor to show field details when a field is ... Fri, 12 Nov 2010 17:05:14 GMT work@… [1134] * trunk/grails-app/views/home/index.gsp (modified) - check voor dbnpdemo instead of demo Fri, 12 Nov 2010 14:51:22 GMT work@… [1133] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) - it looks like an environment may not contain dashes? Fri, 12 Nov 2010 14:10:07 GMT work@… [1130] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) - changed nbx test and demo configurations to reflect dbnp.org domain ... Fri, 12 Nov 2010 13:59:29 GMT work@… [1129] * trunk/grails-app/conf/Config.groovy (modified) - changed nbx test and demo configurations to reflect dbnp.org domain ... Fri, 12 Nov 2010 12:29:14 GMT work@… [1128] * trunk/grails-app/views/common/_demo_intro.gsp (added) * trunk/grails-app/views/home/index.gsp (modified) - added demo instance introduction page Fri, 12 Nov 2010 11:11:35 GMT work@… [1127] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) - added demo configuration Fri, 12 Nov 2010 11:08:07 GMT t.w.abma@… [1126] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - initial fuzzy logic incorporated in Importer service Thu, 11 Nov 2010 15:05:03 GMT business@… [1125] * trunk/grails-app/views/templateEditor/index.gsp (modified) fix to avoid error message when trying to compare templates when none ... Thu, 11 Nov 2010 13:55:11 GMT work@… [1123] * trunk/grails-app/controllers/dbnp/setup/SetupController.groovy (modified) - tiny word change Thu, 11 Nov 2010 13:53:12 GMT t.w.abma@… [1122] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - preview fixed (sometimes didn't show all values read from Excel), ... Thu, 11 Nov 2010 13:29:16 GMT t.w.abma@… [1121] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (added) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (added) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/test/unit/dbnp/importer/CellTests.groovy (added) * trunk/test/unit/dbnp/importer/ImportRecordTests.groovy (added) - rewrote part of the importer and added a ImportRecord and ... Thu, 11 Nov 2010 12:58:57 GMT work@… [1120] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapAuthentication.groovy (modified) - fixing springSecurityService issue in static methods Thu, 11 Nov 2010 12:39:58 GMT work@… [1119] * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/dbnp/setup (added) * trunk/grails-app/controllers/dbnp/setup/SetupController.groovy (added) * trunk/grails-app/controllers/dbnp/studycapturing/SetupController.groovy (deleted) * trunk/grails-app/views/common/_feedback.gsp (deleted) * trunk/grails-app/views/common/_new_installation.gsp (deleted) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/setup/common/_wizard.gsp (added) * trunk/grails-app/views/setup/index.gsp (added) * trunk/grails-app/views/setup/pages (added) * trunk/grails-app/views/setup/pages/_start.gsp (added) - initial version of the setup assistant Thu, 11 Nov 2010 11:18:20 GMT work@… [1118] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapAuthentication.groovy (added) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SetupController.groovy (added) * trunk/grails-app/domain/dbnp/data/Ontology.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/views/common/_new_installation.gsp (added) * trunk/grails-app/views/setup (added) * trunk/grails-app/views/setup/common (added) - cleaned up the Bootstrap Wed, 10 Nov 2010 11:30:46 GMT work@… [1114] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) - added nbx14 config, we need a better solution to support multiple ... Wed, 10 Nov 2010 08:37:02 GMT adem.bilican@… [1112] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/views/exporter/index.gsp (modified) SimpleTox exporter + ZIP file for multiple studies + error handling Tue, 09 Nov 2010 18:01:56 GMT work@… [1111] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) - removing debug lines that template field values are being set... Tue, 09 Nov 2010 17:53:25 GMT work@… [1110] * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) - bootstrapping tried to insert duplicate ontologies... Tue, 09 Nov 2010 17:37:37 GMT work@… [1109] * trunk/grails-app/domain/dbnp/studycapturing/Identity.groovy (modified) - instantiating messages are gone Tue, 09 Nov 2010 17:35:36 GMT work@… [1108] * trunk/grails-app/domain/dbnp/studycapturing/Identity.groovy (modified) - instantiating messages go to debug loglevel Tue, 09 Nov 2010 17:12:29 GMT work@… [1107] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) - changed SAM url configuration - guys, bootstrap is a terrible ... Tue, 09 Nov 2010 13:55:29 GMT work@… [1106] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/conf/Searchable.groovy (modified) - added environments used by build scripts (e.g. ci, test and www) Tue, 09 Nov 2010 09:14:23 GMT t.w.abma@… [1103] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_error.gsp (added) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) * trunk/grails-app/views/importer/step1_simple.gsp (modified) * trunk/grails-app/views/importer/step3_simple.gsp (modified) - added error page for importer - empty ontologies detected in Excel ... Tue, 09 Nov 2010 08:29:36 GMT business@… [1102] * trunk/grails-app/views/wizard/pages/_confirmation.gsp (modified) fixed bug in confirmation step of wizard