source: trunk/grails-app/services

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Diff Rev Age Author Log Message
(edit) @2060   12 years s.h.sikkema - removed default value for samples argument in …
(edit) @2049   12 years s.h.sikkema enabled collecting module measurements for galaxy integration
(edit) @2026   12 years work - resolved the issue of hibernate sessions conflicts (hibernate …
(edit) @1991   12 years robert Updated visualization controller and added log debug statements to …
(edit) @1969   12 years robert Added the possibility to export assay data for samples after …
(edit) @1945   12 years robert - Updated the import algorithm in the simpleWizard, so it won't be too …
(edit) @1941   12 years robert - Implemented getStudyVersions rest call to assist module …
(edit) @1939   12 years robert Updated module notification so that it also sends authentication to …
(edit) @1937   12 years robert Removed debug statements
(edit) @1936   12 years robert Added trace statements in assay exporter
(edit) @1931   12 years robert Users will be logged out from modules when logging out from GSCF now. …
(edit) @1864   13 years s.h.sikkema in exporter: module error display improvements (ie. display on screen …
(edit) @1853   13 years s.h.sikkema changed module communication HTTP method to "POST" to deal with …
(edit) @1852   13 years robert Improved module communication when no parameters are given
(edit) @1841   13 years s.h.sikkema removed obsolete UI references to Excel. Fixed study data numbers not …
(edit) @1830   13 years s.h.sikkema Clarified error messages related to unreachable module; added …
(edit) @1828   13 years s.h.sikkema Fixed only being able to export to tab delimited; fixed 'null' values …
(edit) @1827   13 years s.h.sikkema added different assay export possibilities (tab delimited, csv (comma …
(edit) @1803   13 years s.h.sikkema Improved CSV export
(edit) @1790   13 years s.h.sikkema fixed bug where preview of small export would fail; changed assay …
(edit) @1783   13 years robert Extended the time a user is logged in, in order to facilitate huge …
(edit) @1752   13 years robert Updated assay export to be able to export multiple assays or studies …
(edit) @1731   13 years robert Bugfix with the order of samples in the assay exporter
(edit) @1730   13 years s.h.sikkema Excel export uses getMeasurements rest call; made assay export visible …
(edit) @1727   13 years robert Adjusted assayservice to make exporting assays work with the …
(edit) @1716   13 years s.h.sikkema new gdtImporter; new jumpbar; excel export to webflow; fixed spelling …
(edit) @1700   13 years j.saito Minor changes in documentation.
(edit) @1699   13 years j.saito Removed empty folder/package that is no longer in use.
(edit) @1698   13 years j.saito StudyXMLService and corresponding controller ready for hand over to …
(edit) @1696   13 years j.saito Moved to StudyXMLService.
(edit) @1695   13 years j.saito This is the new structure for importing / exporting studies from / to …
(edit) @1694   13 years j.saito Moved methods from service into controller.
(edit) @1687   13 years business added /query to assayService module REST call URLs to be more …
(edit) @1684   13 years robert improvements in simple wizard
(edit) @1677   13 years robert Small fix for simple wizard importer
(edit) @1621   13 years robert Fixed some bugs in simple wizard and study view page
(edit) @1613   13 years robert Removed some printlns
(edit) @1612   13 years robert Update simple wizard to import subject without a name correctly and …
(edit) @1611   13 years robert Improved simple study wizard
(edit) @1610   13 years robert Improved simple import wizard to be able to import events
(edit) @1609   13 years robert Improved simple editing wizard
(edit) @1608   13 years robert Fixed bug with hibernate and transactional services in the simple wizard
(edit) @1606   13 years s.h.sikkema added import org.codehaus.groovy.grails.plugins.web.taglib.ValidationTagLib?
(edit) @1605   13 years s.h.sikkema commit for Robert: see if webflow works when all logic is moved to …
(edit) @1603   13 years work - importer wizard for studies is instantiating a study from the hidden …
(edit) @1600   13 years work added some debugging lines
(edit) @1596   13 years robert Solved #344 - retrieving module data is now done using POST
(edit) @1591   13 years robert Improved simple wizard so that is can edit studies
(edit) @1588   13 years s.h.sikkema Fixed tests (except webtests); cleaned up …
(edit) @1583   13 years s.h.sikkema UI improvements to assay exporter (ticket #159)
(edit) @1581   13 years work set keyword expansion
(edit) @1577   13 years robert Resolved problems with module communication
(edit) @1576   13 years robert - Solved locking problems with module communication - Fixed a null …
(edit) @1568   13 years j.saito Added support for matching tempaltes that are present in system. In …
(edit) @1561   13 years s.h.sikkema Removed some imports and a reference to dbnp.studycapturing.Book to …
(edit) @1560   13 years j.saito Added import methods for XML import of studies. Still not workig (and …
(edit) @1559   13 years s.h.sikkema Assay export functionality
(edit) @1553   13 years robert First version of a simple wizard
(edit) @1545   13 years work - removed obsolete bgdt imports
(edit) @1536   13 years t.w.abma - fixed refresh of first page in import wizard, to fix: …
(edit) @1527   13 years t.w.abma - Importermappings can now be fully retrieved and stored in step 2 of …
(edit) @1518   13 years j.saito Fixed bug relating to Publication and SecUser?.
(edit) @1517   13 years robert Bugfix in module communication
(edit) @1516   13 years j.saito Exporter for representing Study objects as XML and parsing them back. …
(edit) @1515   13 years t.w.abma - added load/save button to mappings page - fuzzy button applies fuzzy …
(edit) @1509   13 years work - gdt to 0.0.10 - bgdt to 0.0.4 - ajaxflow to 0.2.0 - removed …
(edit) @1508   13 years robert - Made file upload directory configurable (#282) - Fixed bug in …
(edit) @1506   13 years robert Removed some comments
(edit) @1501   13 years robert - Number of seconds for the rest controller to keep data in cache is …
(edit) @1499   13 years t.w.abma - removed some debug statements
(edit) @1492   13 years t.w.abma - corrected StringList? items in the mappings page are now also …
(edit) @1489   13 years t.w.abma - improved missing values in stringlist fields, still to fix: make …
(edit) @1482   13 years robert Implemented saving of queries
(edit) @1471   13 years work - double imports
(edit) @1469   13 years t.w.abma - importer doesn't crash on empty (null) rows in an Excel sheet …
(edit) @1458   13 years robert - Implemented a cache for module rest calls, to increase performance …
(edit) @1457   13 years work - fixed missing imports caused by Intellij's smart refactoring... …
(edit) @1456   13 years business moved gdt package to org.dbnp, moved tests for RelTime?, …
(edit) @1455   13 years s.h.sikkema Using moduleCommunicationService now to fetch measurement data from module
(edit) @1446   13 years robert Implemented convenience method to call rest methods on modules
(edit) @1445   13 years s.h.sikkema Rudimentary assay export functionality
(edit) @1442   13 years robert The new stable identifiers (see r1440 and #255) were not yet used when …
(edit) @1430   13 years work - set keyword expansion
(edit) @1426   13 years work - Resolved part of improvement #225 - refactored the template model …
(edit) @1425   13 years s.h.sikkema Rudimentary assay export functionality
(edit) @1422   13 years work - fixed importer issue with the authentication service not being …
(edit) @1421   13 years work - fixed importer issue with the authentication service not being …
(edit) @1417   13 years work - did some extreme programming with Tjeerd to fix issues in the …
(edit) @1416   13 years t.w.abma - again fixed the importer, persisting seemed to work fine, but …
(edit) @1411   13 years t.w.abma - cleaned up importer service and controller (and removed flow …
(edit) @1402   13 years t.w.abma - minor fix in saveDatamatrix method in ImporterService?, by adding …
(edit) @1376   13 years t.w.abma - casting errors are nog being ignored, but are at least logged, …
(edit) @1367   13 years t.w.abma - added dialog (based on study wizard) for more detailed information …
(edit) @1357   13 years robert Implemented module notification when a study changes (#259)
(edit) @1326   13 years t.w.abma - indendation fix
(edit) @1318   13 years t.w.abma - removed obsolete code
(edit) @1317   13 years t.w.abma - seems that depending on the Excel-sheet type a XSSFCell or HSSFCell …
(edit) @1316   13 years t.w.abma - trigger for restart (committed too fast between to commits?)
(edit) @1315   13 years t.w.abma - replaced HSSFCell by XSSFCell-object (returned when getting a cell …
(edit) @1311   13 years t.w.abma - removed parent-setters from saveDatamatrix-method in ImporterService? …
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