source: trunk/grails-app/domain

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Diff Rev Age Author Log Message
(edit) @1103   13 years t.w.abma - added error page for importer - empty ontologies detected in Excel …
(edit) @1056   13 years robert Changed template editor to be more user friendly with selecting field …
(edit) @1036   13 years robert Fixed the random order of templates in the study pages (#135) and …
(edit) @1034   13 years j.a.m.wesbeek - implemented improvement #150 ( ​https://trac.nbic.nl/gscf/ticket/150 …
(edit) @1027   13 years robert Implemented compare templates feature and fixed show studies overview …
(edit) @1014   13 years j.saito Refactored AssayModule?.url to AssayModule?.consumer in all parts effected.
(edit) @1013   13 years business changed Ontology ncboId to unique, extended range of fulltext query
(edit) @999   13 years t.w.abma - fixed constraint violation error by adding parent to the entities
(edit) @996   13 years robert Implemented clone feature in template editor (ticket #6), added a rest …
(edit) @985   13 years robert Removed spring-security-ui plugin to decrease dependencies. The …
(edit) @983   13 years robert New type of authentication and authorization added to the rest …
(edit) @976   13 years robert Authentication and authorization for studies is added, according to …
(edit) @974   13 years j.a.m.wesbeek - removed the 'required' keyword from the Study's domainFields for the …
(edit) @967   13 years business added Study 'published' field to domainFields
(edit) @966   13 years business also added assays check in Study.deleteEventGroup, added test to check …
(edit) @965   13 years business fix Study.deleteEventGroup to correctly delete samples (still TODO: …
(edit) @962   13 years j.a.m.wesbeek - assay page in the wizard did not properly displayed the required …
(edit) @961   13 years t.w.abma - removed Entity references completely and removed display of members …
(edit) @960   13 years business changed parentEvent in Sample to nullable. Please make sure that any …
(edit) @959   13 years j.a.m.wesbeek - set keyword expansion
(edit) @950   13 years j.a.m.wesbeek - Tjeerd change broke the wizard, reverted... (should probably work …
(edit) @937   13 years t.w.abma - fixed (hopefully) integrity contraints error
(edit) @936   13 years t.w.abma - Nimble removed, AAAA-plugin installed (based on Spring Security), …
(edit) @934   13 years j.saito Adjusted CommunicationManager? to match closer with …
(edit) @933   13 years business fixed a bug in the belongsToGroup functions in Event and SamplingEvent?
(edit) @902   13 years jahn Undone change to TemplateEntity?.
(edit) @901   13 years jahn Added and tested new Rest methods in accordance with specs. Tested …
(edit) @900   13 years keesvb fix for bug #164 (workaround for GRAILS-6754)
(edit) @897   13 years keesvb fixed multiple bugs in importer, really implemented the header and …
(edit) @896   13 years keesvb the workaround for checking Template name uniqueness actually broke …
(edit) @887   13 years duh - fix issue #161
(edit) @883   13 years keesvb workaround for checking Template name uniqueness
(edit) @881   13 years duh - Date parsing was borked, fixed…
(edit) @878   13 years keesvb finally found that nasty nasty persistance bug which was also leading …
(edit) @874   13 years duh - Resolved issue #66, marking required fields in wizard
(edit) @863   13 years duh - added method to properly delete Assays from study
(edit) @862   13 years duh - adding assay grouping page
(edit) @861   13 years keesvb added test for Sample name uniqueness at the validate() stage
(edit) @859   13 years duh - externalAssayID was changed to String in previous revision, however …
(edit) @857   13 years duh - added Assay Page
(edit) @847   13 years duh - fixed null object issue in TemplateEntity? - event group tooltip only …
(edit) @834   13 years keesvb changed externalAssayId to string
(edit) @833   13 years keesvb nimble UserBase? is somehow blocking getId and ident(), use for loop instead
(edit) @832   13 years keesvb override for getId in User class
(edit) @830   13 years keesvb moved Nimble BootStrap? to BootStrap? (there seems to be no way to hack …
(edit) @825   13 years duh - added TemplateField?: MODULE (AssayModule? --> module gscf can …
(edit) @822   13 years duh - added revision information to the header
(edit) @821   13 years keesvb deleted AssayType? domain class
(edit) @819   13 years duh - removed test code from wizard
(edit) @817   13 years keesvb fixed deleting of event groups, they now also cascade to samples in …
(edit) @814   13 years keesvb re-added nimble 0.4, after re-adding plugin and running jack-be-nimble …
(edit) @813   13 years keesvb updated event group with unique name constraint, added EventGroup? …
(edit) @812   13 years keesvb added Sample tests for deleting samples via parent sampling event and …
(edit) @811   13 years duh - typo
(edit) @810   13 years duh - added some more debugging lines to eventGroup deletion method
(edit) @807   13 years duh - added some more comments
(edit) @805   13 years duh - fixed study show page - worked on eventgroup deletion, note that …
(edit) @803   13 years duh - added a new TemplateEntity? type: Template - added a required …
(edit) @798   13 years duh - i miss my fancy leading dot
(edit) @797   13 years duh - optimized Identity class
(edit) @796   13 years keesvb deleted more nimble stuff, moved User and Profile classes to package …
(edit) @794   13 years keesvb thread safe implementation of Identity increment
(edit) @790   13 years duh - removed Nimble plugin as it breaks war deployments on Tomcat
(edit) @787   13 years duh - refactored wizard sample page - more code improvements (unique …
(edit) @786   13 years duh - added some more documentation
(edit) @785   13 years duh - forgot to remove identity methods and variables from TemplateEntity?
(edit) @784   13 years duh - set keyword expansion
(edit) @783   13 years duh - Unified the internal domain identifier
(edit) @782   13 years duh - fixed nimble installation
(edit) @779   13 years duh - nimble is blocking war building... removing nimble altogether for now
(edit) @778   13 years duh - big refactoring of the Study Capture Wizard until the grouping page, …
(edit) @774   13 years keesvb added deleteSubject method to Study, updated Study and Sample …
(edit) @770   13 years duh - upgraded nimble to 0.4-SNAPSHOT
(edit) @756   13 years keesvb updated Term constraint: accession is prefixed by the ontology …
(edit) @754   13 years keesvb big refactoring / change of the data model: implemented belongsTo …
(edit) @728   13 years tabma - fixed toString-method
(edit) @725   13 years keesvb enabled boolean field recognition of 'x', added SamplingEvent? field …
(edit) @701   13 years keesvb changed Event start time string getter to fetch the correct …
(edit) @698   13 years keesvb corrected wrong Event start time method call in RestController?
(edit) @697   13 years keesvb added assayModule and assay controllers to be able to create assays
(edit) @690   13 years keesvb workaround for adding assays (scaffolded controllers), in order to be …
(edit) @689   13 years keesvb finally added the uniqueness constraint for sample names. it's real …
(edit) @669   13 years tabma - added "Don' t import" functionality which ignores columns
(edit) @667   13 years duh - removed searchable lines from Subject and Sample as the break the …
(edit) @662   13 years keesvb restructured BootStrap?, it should now run faster because there are no …
(edit) @661   13 years tabma - fixed property assignment by using lookup from new entity object …
(edit) @654   13 years keesvb updated sample and study tests, added belongsTo to Sample (which gives …
(edit) @652   13 years keesvb relocated getExternalSampleId to name
(edit) @651   13 years jahn Added externalSampleId for SAM communication.
(edit) @643   13 years jahn This setting of searchable features seems not to provoke searchable …
(edit) @640   13 years vinlud Setting Searchable only to search in known string fields
(edit) @629   13 years duh - fixed bug in study view page caused by revision # 602
(edit) @625   13 years keesvb changed ontology getOrCreate because the actual db type of ncboId is int
(edit) @622   13 years duh - disabeling searchable for issue #126
(edit) @602   13 years jahn Several minor changes and cleaning up related to date repsentations …
(edit) @580   13 years keesvb typing error in last commit
(edit) @579   13 years keesvb clarified display of RELTIME to show 0s when time = 0
(edit) @572   13 years keesvb fixed bugs #111 and #112
(edit) @569   13 years duh - commit related to bug # 107 -- extended Ontology domain class with a …
(edit) @565   13 years duh - upon adding a term the termEditorController now also adds the …
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