# # ChangeLog for trunk/grails-app/controllers # # Generated by Trac 1.0.2 # Jan 22, 2021, 8:19:55 AM Fri, 07 Jan 2011 15:51:56 GMT work@… [1352] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_wait.gsp (deleted) - removed the 'wait for save page' as this is already being handled ... Fri, 07 Jan 2011 13:05:40 GMT work@… [1348] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) - fix for Javassist issue #254, needs some thorough testing... Wed, 05 Jan 2011 14:10:14 GMT work@… [1339] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/i18n/messages_nl.properties (modified) - fixed spelling error - removed validation in 'add subject' logic ... Wed, 05 Jan 2011 10:00:01 GMT t.w.abma@… [1332] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - fixed entity URL-decoding when importing the file Wed, 05 Jan 2011 09:55:00 GMT t.w.abma@… [1331] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - fixed entity selection by adding URL-encoding and decoding to the ... Tue, 04 Jan 2011 10:13:45 GMT robert@… [1328] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) Added metagenomics module and improved rest controller to give 404 ... Thu, 23 Dec 2010 12:44:16 GMT t.w.abma@… [1324] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - tomcat trigger Thu, 23 Dec 2010 10:36:01 GMT t.w.abma@… [1322] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - fixed properties page Wed, 22 Dec 2010 14:16:22 GMT t.w.abma@… [1315] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - replaced HSSFCell by XSSFCell-object (returned when getting a cell ... Wed, 22 Dec 2010 13:08:19 GMT t.w.abma@… [1313] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - removed URL-encoding of encrypted "importable entities" Wed, 22 Dec 2010 12:43:21 GMT work@… [1312] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) - removed debug line Wed, 22 Dec 2010 12:39:29 GMT t.w.abma@… [1311] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - removed parent-setters from saveDatamatrix-method in ... Tue, 21 Dec 2010 15:42:03 GMT work@… [1309] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/views/studyWizard/common/_tabs.gsp (modified) - adding feature #208, clickable breadcrumbs / tabs as subtask of #183 Tue, 21 Dec 2010 13:21:50 GMT work@… [1304] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - and redirecting into studyWizard instead of studywizard (views) Tue, 21 Dec 2010 11:59:17 GMT work@… [1300] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) - intellij marks this file red because of 'error()' in a comment Mon, 20 Dec 2010 23:44:17 GMT work@… [1292] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - removed some obsolete debug printlns Mon, 20 Dec 2010 23:04:37 GMT work@… [1286] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (added) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (deleted) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/studywizard (added) * trunk/grails-app/views/studywizard/common (added) * trunk/grails-app/views/studywizard/common/_ajaxflow.gsp (added) * trunk/grails-app/views/studywizard/common/_error.gsp (added) * trunk/grails-app/views/studywizard/common/_navigation.gsp (added) * trunk/grails-app/views/studywizard/common/_on_page.gsp (added) * trunk/grails-app/views/studywizard/common/_page_footer.gsp (added) * trunk/grails-app/views/studywizard/common/_page_header.gsp (added) * trunk/grails-app/views/studywizard/common/_refresh_flow.gsp (added) * trunk/grails-app/views/studywizard/common/_tabs.gsp (added) * trunk/grails-app/views/studywizard/index.gsp (added) * trunk/grails-app/views/studywizard/pages (added) * trunk/grails-app/views/studywizard/pages/_assay_groups.gsp (added) * trunk/grails-app/views/studywizard/pages/_assays.gsp (added) * trunk/grails-app/views/studywizard/pages/_confirmation.gsp (added) * trunk/grails-app/views/studywizard/pages/_done.gsp (added) * trunk/grails-app/views/studywizard/pages/_error.gsp (added) * trunk/grails-app/views/studywizard/pages/_events.gsp (added) * trunk/grails-app/views/studywizard/pages/_final_page.gsp (added) * trunk/grails-app/views/studywizard/pages/_groups.gsp (added) * trunk/grails-app/views/studywizard/pages/_modify.gsp (added) * trunk/grails-app/views/studywizard/pages/_page_four.gsp (added) * trunk/grails-app/views/studywizard/pages/_page_one.gsp (added) * trunk/grails-app/views/studywizard/pages/_page_three.gsp (added) * trunk/grails-app/views/studywizard/pages/_page_two.gsp (added) * trunk/grails-app/views/studywizard/pages/_redirect.gsp (added) * trunk/grails-app/views/studywizard/pages/_samples.gsp (added) * trunk/grails-app/views/studywizard/pages/_samples_previous_warning.gsp (added) * trunk/grails-app/views/studywizard/pages/_start.gsp (added) * trunk/grails-app/views/studywizard/pages/_study.gsp (added) * trunk/grails-app/views/studywizard/pages/_subjects.gsp (added) * trunk/grails-app/views/studywizard/pages/_unassigned_samplingEvent_warning.gsp (added) * trunk/grails-app/views/studywizard/pages/_wait.gsp (added) * trunk/web-app/css/ajaxflow.css (added) * trunk/web-app/css/default_style.css (modified) * trunk/web-app/css/importer.css (modified) * trunk/web-app/css/studywizard.css (added) * trunk/web-app/css/table-editor.css (added) * trunk/web-app/css/templates.css (added) * trunk/web-app/css/wizard.css (deleted) * trunk/web-app/css/wizard.min.css (deleted) * trunk/web-app/images/ajaxflow (added) * trunk/web-app/images/ajaxflow/arrowL.gif (added) * trunk/web-app/images/ajaxflow/arrowR.gif (added) * trunk/web-app/images/ajaxflow/spacer.gif (added) * trunk/web-app/js/studywizard.js (added) * trunk/web-app/js/tooltips.js (added) * trunk/web-app/js/wizard.js (deleted) * trunk/web-app/js/wizard.min.js (deleted) - BIG refactoring / rewrite of the wizard to use the ajaxflow plugin, ... Mon, 20 Dec 2010 14:01:29 GMT work@… [1283] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - added comment Mon, 20 Dec 2010 14:00:01 GMT work@… [1282] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) resolves #210, added possibility to duplicate events Thu, 16 Dec 2010 14:42:15 GMT t.w.abma@… [1277] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportMapping.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_ajaxflow.gsp (added) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/common/_navigation.gsp (added) * trunk/grails-app/views/importer/common/_on_page.gsp (added) * trunk/grails-app/views/importer/common/_page_footer.gsp (added) * trunk/grails-app/views/importer/common/_page_header.gsp (added) * trunk/grails-app/views/importer/common/_postview.gsp (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/common/_refresh_flow.gsp (added) * trunk/grails-app/views/importer/common/_tabs.gsp (added) * trunk/grails-app/views/importer_deleted (added) * trunk/grails-app/views/importer_deleted/index.gsp (added) * trunk/grails-app/views/importer_deleted/pages (added) * trunk/grails-app/views/importer_deleted/pages/_error.gsp (added) * trunk/grails-app/views/importer_deleted/pages/_final_page.gsp (added) * trunk/grails-app/views/importer_deleted/pages/_page_four.gsp (added) * trunk/grails-app/views/importer_deleted/pages/_page_one.gsp (added) * trunk/grails-app/views/importer_deleted/pages/_page_three.gsp (added) * trunk/grails-app/views/importer_deleted/pages/_page_two.gsp (added) * trunk/web-app/css/importer.css (modified) * trunk/web-app/images/importer (added) * trunk/web-app/images/importer/arrowL.gif (added) * trunk/web-app/images/importer/arrowR.gif (added) * trunk/web-app/images/importer/spacer.gif (added) - rewrite of the Importer Wizard into an Ajaxflow Wed, 15 Dec 2010 12:53:28 GMT robert@… [1274] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) Trying to solve a bug that only appears on ci, not locally, in ... Wed, 15 Dec 2010 12:47:31 GMT robert@… [1273] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) Trying to solve a bug that only appears on ci, not locally, in ... Wed, 15 Dec 2010 12:44:27 GMT robert@… [1272] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) Trying to solve a bug that only appears on ci, not locally, in ... Wed, 15 Dec 2010 12:32:02 GMT robert@… [1270] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/template/xml.gsp (modified) Bugfix in importing templates (ticket #76) Wed, 15 Dec 2010 12:20:43 GMT robert@… [1269] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/views/template/handleImportedFile.gsp (modified) * trunk/grails-app/views/template/xml.gsp (modified) * trunk/web-app/css/templateEditor.css (modified) Fixed bug in importing templates without any fields and improved ... Mon, 13 Dec 2010 10:50:28 GMT s.h.sikkema@… [1261] * trunk/application.properties (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/exporter/selectAssay.gsp (added) * trunk/grails-app/views/study/show_assays.gsp (modified) * trunk/test/unit/dbnp/studycapturing/AssayControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyControllerTests.groovy (modified) Changed jumbar layout to simple iframe for modules Fri, 10 Dec 2010 14:12:28 GMT work@… [1260] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/i18n/messages.properties (modified) * trunk/grails-app/i18n/messages_nl.properties (modified) * trunk/grails-app/views/wizard/common/_error.gsp (modified) - resolves #198, user friendly error messages in wizard Fri, 10 Dec 2010 10:24:02 GMT work@… [1259] * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) - getAllErrors.join will break your application as getAllErrors is a ... Thu, 09 Dec 2010 20:12:10 GMT robert@… [1257] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/utils/SimpleXMLCodec.groovy (added) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/template (added) * trunk/grails-app/views/template/export.gsp (added) * trunk/grails-app/views/template/handleImportedFile.gsp (added) * trunk/grails-app/views/template/importTemplate.gsp (added) * trunk/grails-app/views/template/saveImportedTemplates.gsp (added) * trunk/grails-app/views/template/xml.gsp (added) * trunk/grails-app/views/templateEditor/elements/_disabledFieldForm.gsp (modified) * trunk/schema/template.xml (added) * trunk/schema/template.xsd (added) * trunk/test/unit/dbnp/studycapturing/TemplateFieldTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateTests.groovy (modified) * trunk/web-app/css/templateEditor.css (modified) Added an export and import functionality for templates, as described ... Thu, 09 Dec 2010 13:51:51 GMT work@… [1245] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) - moved 'description' from study template fields into domain ... Thu, 09 Dec 2010 12:58:36 GMT work@… [1242] * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) - added Facebook open graph tags - added Facebook like button to ... Thu, 09 Dec 2010 12:26:39 GMT work@… [1241] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/default_style.css (modified) - added Facebook like support Tue, 30 Nov 2010 16:59:51 GMT work@… [1227] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - improved in-code comment Tue, 30 Nov 2010 16:26:24 GMT work@… [1225] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - resolved issue #223 Tue, 30 Nov 2010 14:56:07 GMT t.w.abma@… [1223] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/step4.gsp (modified) - improved error messaging in the last step of the wizard Tue, 30 Nov 2010 13:10:42 GMT robert@… [1222] * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) Implemented improved authorisation to give administrators all ... Tue, 30 Nov 2010 09:53:15 GMT adem.bilican@… [1220] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) error in the SimpleTox exporter for parentSubject attribut Tue, 30 Nov 2010 09:50:36 GMT adem.bilican@… [1219] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) error in the SimpleTox exporter for parentSubject attribut Tue, 30 Nov 2010 09:45:55 GMT adem.bilican@… [1218] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) error in the SimpleTox exporter Tue, 30 Nov 2010 09:40:34 GMT adem.bilican@… [1217] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/views/exporter/index.gsp (modified) error in the SimpleTox exporter Tue, 30 Nov 2010 08:37:37 GMT t.w.abma@… [1216] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - step 3 (mapping properties) added simple error message telling what ... Tue, 30 Nov 2010 08:28:59 GMT t.w.abma@… [1215] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - step 3 (mapping properties) now requires all fields to be valid ... Mon, 29 Nov 2010 15:56:48 GMT robert@… [1213] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/study/createTimelineBandsJs.gsp (added) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_assays.gsp (added) * trunk/grails-app/views/study/show_events_table.gsp (added) * trunk/grails-app/views/study/show_events_timeline.gsp (added) * trunk/grails-app/views/study/show_persons.gsp (added) * trunk/grails-app/views/study/show_publications.gsp (added) * trunk/grails-app/views/study/show_samples.gsp (added) * trunk/grails-app/views/study/show_subjects.gsp (added) * trunk/web-app/js/timeline-simile/relative-time.js (modified) Improved the study overview page such that the different tabs are ... Mon, 29 Nov 2010 10:38:52 GMT adem.bilican@… [1210] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) modifying the simple tox file name because of errors Fri, 26 Nov 2010 17:36:36 GMT work@… [1208] * trunk/application.properties (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) - obsolete import in sanbox controller broke gscf - added ajax-flow ... Fri, 26 Nov 2010 12:02:51 GMT t.w.abma@… [1207] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/step4.gsp (modified) - added an initial simple overview in last step of import wizard ... Thu, 25 Nov 2010 16:33:23 GMT m.s.vanvliet@… [1204] * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) Syncs all samples for assays on load Pilot/Show... Thu, 25 Nov 2010 16:26:07 GMT robert@… [1203] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/js/timeline-simile/custom-timeline.js (modified) * trunk/web-app/js/timeline-simile/relative-time.js (added) Updated the events timeline in the study view, according to ticket #72 Thu, 25 Nov 2010 14:51:14 GMT t.w.abma@… [1202] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/step3_simple.gsp (modified) - removed extra step and implemented a failed cells check in step 3 ... Thu, 25 Nov 2010 09:56:40 GMT j.saito@… [1199] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Further streamlined CommunicationManager. It now builds fetches its ... Wed, 24 Nov 2010 16:10:37 GMT business@… [1197] * trunk/grails-app/controllers/dbnp/clinicaldata (deleted) * trunk/grails-app/domain/dbnp/clinicaldata (deleted) * trunk/grails-app/domain/dbnp/data/FeatureBase.groovy (deleted) * trunk/grails-app/domain/dbnp/data/FeatureType.groovy (deleted) * trunk/grails-app/services/dbnp/clinicaldata (deleted) deleted old clinical module stuff, don't know why it is still in... Wed, 24 Nov 2010 10:47:41 GMT j.saito@… [1196] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) Streamlined CommunicationManager and adjusted it to suit ... Tue, 23 Nov 2010 12:59:12 GMT t.w.abma@… [1194] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - removed debug line Tue, 23 Nov 2010 12:50:40 GMT t.w.abma@… [1193] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - refresh error when calling savePostview now really shouldn't popup ... Tue, 23 Nov 2010 11:37:18 GMT work@… [1192] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - looking into #187 which is reproducable on ci, but not on dev. ... Tue, 23 Nov 2010 10:17:00 GMT t.w.abma@… [1191] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - calling savePostview url directly gives a warning now that the ... Tue, 23 Nov 2010 08:47:15 GMT robert@… [1188] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) Fixed deletion of studies (see ticket #201) Mon, 22 Nov 2010 16:27:23 GMT robert@… [1182] * trunk/grails-app/controllers/dbnp/studycapturing/FileController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/wizard.css (modified) * trunk/web-app/js/wizard.js (modified) Improved file upload fields so users can delete existing files and ... Mon, 22 Nov 2010 16:06:54 GMT work@… [1181] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/i18n/messages_nl.properties (modified) * trunk/grails-app/views/study/list.gsp (modified) - resolved issue #180, added links to directly edit or view studies ... Mon, 22 Nov 2010 15:33:42 GMT work@… [1180] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - enabling quicksave through the wizard // since this controller ... Fri, 19 Nov 2010 11:31:15 GMT work@… [1177] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - removed debug println Fri, 19 Nov 2010 11:19:29 GMT work@… [1176] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) - resolved issue #187 by refactoring the TermEditor to support the ... Fri, 19 Nov 2010 10:51:09 GMT robert@… [1175] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/templateEditor/elements/_disabledFieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_fieldForm.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldNotInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) The templateeditor is now capable of adding new items to a stringlist ... Thu, 18 Nov 2010 15:31:30 GMT business@… [1173] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) fix another typo which broke study edit wizard Thu, 18 Nov 2010 14:20:10 GMT t.w.abma@… [1171] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) - added add / modify to date template chooser - added some JS to ... Thu, 18 Nov 2010 12:10:23 GMT business@… [1168] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) fix typo which broke study create wizard Thu, 18 Nov 2010 10:21:53 GMT t.w.abma@… [1165] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - removed INTEGER/FLOAT support in the Import Wizard controller and ... Wed, 17 Nov 2010 17:05:04 GMT work@… [1162] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - resolves improvement #1, generating an assay id suggestion in the ... Wed, 17 Nov 2010 15:20:33 GMT robert@… [1159] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/templateEditor/_ontologyDialog.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldNotInUse.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liFieldSelected.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_liTemplateNonEditable.gsp (modified) * trunk/grails-app/views/templateEditor/elements/_selected.gsp (modified) * trunk/grails-app/views/templateEditor/index.gsp (modified) * trunk/grails-app/views/user/edit.gsp (modified) Improved the template editor so that template fields can be removed ... Wed, 17 Nov 2010 13:31:57 GMT robert@… [1157] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) Removed unnecessary REST call from term editor Wed, 17 Nov 2010 13:12:48 GMT work@… [1155] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_samples.gsp (modified) - resolving issue #195, sample generation madness. This was partly ... Wed, 17 Nov 2010 09:45:55 GMT robert@… [1152] * trunk/grails-app/controllers/dbnp/authentication/RegisterController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserController.groovy (modified) * trunk/grails-app/views/register/forgotPassword.gsp (modified) * trunk/grails-app/views/user/edit.gsp (modified) Changed flash.error to flash.userError in the authentication part to ... Tue, 16 Nov 2010 17:48:08 GMT work@… [1150] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) - resolves issue #180 Tue, 16 Nov 2010 17:30:11 GMT work@… [1149] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/common/_error.gsp (modified) - resolving issue #197 where the study wizard breaks is flash.errors ... Tue, 16 Nov 2010 14:47:30 GMT robert@… [1147] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/i18n/messages.spring-security-ui.properties (modified) Resolved exception with the RegisterCommand Tue, 16 Nov 2010 13:57:22 GMT robert@… [1144] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/RegistrationCode.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/i18n/messages.spring-security-ui.properties (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/email/_registrationConfirmationUser.gsp (modified) * trunk/grails-app/views/userRegistration/index.gsp (modified) * trunk/web-app/css/login_panel.css (modified) Added an expiry date to the confirmation email for the user and ... Tue, 16 Nov 2010 10:47:46 GMT t.w.abma@… [1143] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) - import wizard: fuzzy matching for column properties (step 2) ... Mon, 15 Nov 2010 22:10:37 GMT t.w.abma@… [1141] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_properties_horizontal.gsp (modified) - added fuzzy matching to importer tag library Mon, 15 Nov 2010 19:25:49 GMT t.w.abma@… [1140] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) - added ability to add new ontologies in the "missing properties" step Mon, 15 Nov 2010 12:36:42 GMT robert@… [1138] * trunk/grails-app/controllers/dbnp/authentication/UserRegistrationController.groovy (modified) * trunk/grails-app/i18n/messages.spring-security-ui.properties (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/userRegistration/add.gsp (modified) * trunk/grails-app/views/userRegistration/index.gsp (modified) * trunk/grails-app/views/userRegistration/profile.gsp (added) Implemented ability to changed password and email address when logged ... Fri, 12 Nov 2010 11:08:07 GMT t.w.abma@… [1126] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - initial fuzzy logic incorporated in Importer service Thu, 11 Nov 2010 13:55:11 GMT work@… [1123] * trunk/grails-app/controllers/dbnp/setup/SetupController.groovy (modified) - tiny word change Thu, 11 Nov 2010 13:53:12 GMT t.w.abma@… [1122] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - preview fixed (sometimes didn't show all values read from Excel), ... Thu, 11 Nov 2010 13:29:16 GMT t.w.abma@… [1121] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportCell.groovy (added) * trunk/grails-app/domain/dbnp/importer/ImportRecord.groovy (added) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/test/unit/dbnp/importer/CellTests.groovy (added) * trunk/test/unit/dbnp/importer/ImportRecordTests.groovy (added) - rewrote part of the importer and added a ImportRecord and ... Thu, 11 Nov 2010 12:39:58 GMT work@… [1119] * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/dbnp/setup (added) * trunk/grails-app/controllers/dbnp/setup/SetupController.groovy (added) * trunk/grails-app/controllers/dbnp/studycapturing/SetupController.groovy (deleted) * trunk/grails-app/views/common/_feedback.gsp (deleted) * trunk/grails-app/views/common/_new_installation.gsp (deleted) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/setup/common/_wizard.gsp (added) * trunk/grails-app/views/setup/index.gsp (added) * trunk/grails-app/views/setup/pages (added) * trunk/grails-app/views/setup/pages/_start.gsp (added) - initial version of the setup assistant Thu, 11 Nov 2010 11:18:20 GMT work@… [1118] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapAuthentication.groovy (added) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SetupController.groovy (added) * trunk/grails-app/domain/dbnp/data/Ontology.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/views/common/_new_installation.gsp (added) * trunk/grails-app/views/setup (added) * trunk/grails-app/views/setup/common (added) - cleaned up the Bootstrap Wed, 10 Nov 2010 08:37:02 GMT adem.bilican@… [1112] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/views/exporter/index.gsp (modified) SimpleTox exporter + ZIP file for multiple studies + error handling Tue, 09 Nov 2010 09:14:23 GMT t.w.abma@… [1103] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_error.gsp (added) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) * trunk/grails-app/views/importer/common/_missingproperties.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) * trunk/grails-app/views/importer/step1_simple.gsp (modified) * trunk/grails-app/views/importer/step3_simple.gsp (modified) - added error page for importer - empty ontologies detected in Excel ... Mon, 08 Nov 2010 16:10:49 GMT m.s.vanvliet@… [1101] * trunk/grails-app/controllers/RestController.groovy (modified) Fixed the getSamples REST function. When with a sampleToken it ... Mon, 08 Nov 2010 11:53:51 GMT s.h.sikkema@… [1100] * trunk/grails-app/controllers/RestController.groovy (modified) Fixed 401 error Mon, 08 Nov 2010 11:26:35 GMT s.h.sikkema@… [1099] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) Authentication test Mon, 08 Nov 2010 11:16:45 GMT s.h.sikkema@… [1098] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) AuthenticationService instantiated Mon, 08 Nov 2010 11:08:22 GMT s.h.sikkema@… [1097] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) A -> a Mon, 08 Nov 2010 11:06:27 GMT s.h.sikkema@… [1096] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) commented out authenticationservice in loadstudy method Sun, 07 Nov 2010 21:57:19 GMT j.saito@… [1095] * trunk/grails-app/controllers/RestController.groovy (modified) Added access to template fields of Event and Subject in getSamples ... Sun, 07 Nov 2010 21:08:01 GMT j.saito@… [1094] * trunk/grails-app/controllers/RestController.groovy (modified) Added TemplateFields to be returned in getSamples REST resource. Sat, 06 Nov 2010 15:01:11 GMT t.w.abma@… [1093] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/importer/common/_failedcells.gsp (modified) - failed cells correction now implemented in an extra step which ... Fri, 05 Nov 2010 20:02:01 GMT m.s.vanvliet@… [1092] * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) Pilot is user-aware adds a memu item Pilot Fri, 05 Nov 2010 12:12:11 GMT s.h.sikkema@… [1090] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) oops, introduced a typo, now fixed Fri, 05 Nov 2010 12:11:20 GMT s.h.sikkema@… [1089] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/lib/xbean.jar (added) added xbean.jar