# # ChangeLog for trunk/grails-app/conf # # Generated by Trac 1.0.2 # May 17, 2022, 11:59:45 AM Tue, 17 Aug 2010 08:58:35 GMT keesvb [814] * trunk/application.properties (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (added) * trunk/grails-app/conf/NimbleConfig.groovy (added) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (added) * trunk/grails-app/conf/NimbleUrlMappings.groovy (added) * trunk/grails-app/domain/dbnp/user/Profile.groovy (modified) * trunk/grails-app/domain/dbnp/user/User.groovy (modified) * trunk/grails-app/i18n/messages-nimble.properties (added) * trunk/grails-app/i18n/messages-nimble_de.properties (added) * trunk/grails-app/i18n/messages-nimble_pt.properties (added) * trunk/grails-app/views/layouts/nimble.gsp (added) re-added nimble 0.4, after re-adding plugin and running jack-be- ... Mon, 16 Aug 2010 16:04:00 GMT keesvb [812] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) added Sample tests for deleting samples via parent sampling event and ... Fri, 13 Aug 2010 11:30:28 GMT duh [806] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) - fixed BootStrapStudies to reflect yesterday's SamplingEvent changes Tue, 10 Aug 2010 14:14:33 GMT duh [793] * trunk/grails-app/conf/BootStrap.groovy (modified) - studies were accidently turned off during a keyword expansion commit Mon, 09 Aug 2010 12:29:35 GMT duh [790] * trunk/application.properties (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (deleted) * trunk/grails-app/conf/NimbleConfig.groovy (deleted) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (deleted) * trunk/grails-app/conf/NimbleUrlMappings.groovy (deleted) * trunk/grails-app/domain/nimble/Profile.groovy (modified) * trunk/grails-app/domain/nimble/User.groovy (modified) * trunk/test/unit/nimble (added) * trunk/test/unit/nimble/ProfileTests.groovy (added) * trunk/test/unit/nimble/UserTests.groovy (added) - removed Nimble plugin as it breaks war deployments on Tomcat Thu, 05 Aug 2010 22:29:20 GMT duh [782] * trunk/application.properties (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (added) * trunk/grails-app/conf/NimbleConfig.groovy (added) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (added) * trunk/grails-app/conf/NimbleUrlMappings.groovy (added) * trunk/grails-app/domain/nimble/Profile.groovy (modified) * trunk/grails-app/domain/nimble/User.groovy (modified) * trunk/grails-app/i18n/messages-nimble.properties (added) * trunk/grails-app/i18n/messages-nimble_de.properties (added) * trunk/grails-app/i18n/messages-nimble_pt.properties (added) * trunk/grails-app/views/templates (added) * trunk/grails-app/views/templates/nimble (added) * trunk/grails-app/views/templates/nimble/_nimbleheader.gsp (added) * trunk/grails-app/views/templates/nimble/help (added) * trunk/grails-app/views/templates/nimble/help/_confirmation.gsp (added) * trunk/grails-app/views/templates/nimble/login (added) * trunk/grails-app/views/templates/nimble/login/_login.gsp (added) * trunk/grails-app/views/templates/nimble/mail (added) * trunk/grails-app/views/templates/nimble/mail/_accountregistration_email.gsp (added) * trunk/grails-app/views/templates/nimble/mail/_emailchange_email.gsp (added) * trunk/grails-app/views/templates/nimble/mail/_forgottenpassword_email.gsp (added) * trunk/grails-app/views/templates/nimble/mail/_forgottenpassword_external_email.gsp (added) * trunk/grails-app/views/templates/nimble/navigation (added) * trunk/grails-app/views/templates/nimble/navigation/_sidenavigation.gsp (added) * trunk/grails-app/views/templates/nimble/user (added) * trunk/grails-app/views/templates/nimble/user/_extendedinformation.gsp (added) * trunk/grails-app/views/templates/nimble/user/_federationinformation.gsp (added) - fixed nimble installation Thu, 05 Aug 2010 22:08:50 GMT duh [780] * trunk/grails-app/conf/NimbleBootStrap.groovy (deleted) * trunk/grails-app/conf/NimbleConfig.groovy (deleted) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (deleted) * trunk/grails-app/conf/NimbleUrlMappings.groovy (deleted) - nimble is blocking war building... removing nimble altogether for now Thu, 05 Aug 2010 10:15:26 GMT duh [776] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (modified) * trunk/grails-app/conf/NimbleConfig.groovy (modified) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (modified) * trunk/grails-app/conf/NimbleUrlMappings.groovy (modified) * trunk/grails-app/conf/Searchable.groovy (modified) * trunk/grails-app/conf/UrlMappings.groovy (modified) * trunk/grails-app/conf/spring/resources.groovy (modified) set keyword expansion Thu, 05 Aug 2010 10:14:55 GMT duh [775] * trunk/grails-app/conf/BootStrap.groovy (modified) set keyword expansion Tue, 03 Aug 2010 12:00:35 GMT duh [770] * trunk/application.properties (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (modified) * trunk/grails-app/conf/NimbleConfig.groovy (modified) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (modified) * trunk/grails-app/conf/NimbleUrlMappings.groovy (modified) * trunk/grails-app/domain/nimble/Profile.groovy (modified) * trunk/grails-app/domain/nimble/User.groovy (modified) - upgraded nimble to 0.4-SNAPSHOT Fri, 30 Jul 2010 13:05:41 GMT keesvb [754] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayModule.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayType.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Compound.groovy (deleted) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldListItem.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) * trunk/grails-app/views/query/selectsample.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) big refactoring / change of the data model: implemented belongsTo ... Wed, 28 Jul 2010 12:37:09 GMT tabma [740] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) * trunk/web-app/css/importer.css (modified) - added some basic validation via JS (not fancy yet) Tue, 27 Jul 2010 09:30:05 GMT tabma [723] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - enabled SamplingEvent Fri, 23 Jul 2010 14:52:07 GMT keesvb [703] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) added example assays to PPSH in BootStrap in line with the example ... Fri, 23 Jul 2010 13:14:11 GMT keesvb [702] * trunk/grails-app/conf/BootStrap.groovy (modified) updated SAM urls Wed, 21 Jul 2010 15:37:13 GMT keesvb [690] * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayModule.groovy (modified) workaround for adding assays (scaffolded controllers), in order to be ... Wed, 21 Jul 2010 10:22:56 GMT duh [683] * trunk/grails-app/conf/Config.groovy (modified) - fixed config.groovy to include jquery plugin changes Wed, 21 Jul 2010 08:35:41 GMT duh [672] * trunk/grails-app/conf/Searchable.groovy (modified) - changed searchable / compass path Wed, 21 Jul 2010 08:02:16 GMT tabma [671] * trunk/grails-app/conf/Config.groovy (modified) - removed Protocol entity from configuration file Mon, 19 Jul 2010 14:28:10 GMT keesvb [662] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (modified) * trunk/grails-app/conf/BootStrapTemplates.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) restructured BootStrap, it should now run faster because there are no ... Thu, 01 Jul 2010 15:29:46 GMT jahn [639] * trunk/grails-app/conf/BootStrap.groovy (modified) Removed minor bug. Thu, 01 Jul 2010 14:36:25 GMT jahn [638] * trunk/grails-app/conf/BootStrap.groovy (modified) Fixed minor bug. Thu, 01 Jul 2010 14:19:46 GMT jahn [636] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/src/groovy/dbnp/rest/common/CommunicationManager.groovy (modified) * trunk/src/groovy/dbnp/rest/gscf (deleted) Updated CommunicationManager to support URL generation for SAM views. ... Fri, 25 Jun 2010 14:03:14 GMT keesvb [626] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BootStrapStudies.groovy (added) * trunk/grails-app/conf/BootStrapTemplates.groovy (added) removed example templates and studies from BootStrap to separate files Fri, 25 Jun 2010 10:01:07 GMT duh [616] * trunk/grails-app/conf/BootStrap.groovy (modified) - seperated production bootstrapping from development bootstrapping Wed, 16 Jun 2010 13:36:04 GMT duh [571] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) - fixed bug where sampling templates could not be editted Wed, 16 Jun 2010 12:57:34 GMT duh [569] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/data/Ontology.groovy (modified) - commit related to bug # 107 -- extended Ontology domain class with ... Wed, 16 Jun 2010 11:55:55 GMT duh [567] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/templateEditor/index.gsp (modified) * trunk/grails-app/views/templateEditor/template.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/js/SelectAddMore.js (modified) * trunk/web-app/js/SelectAddMore.min.js (modified) * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - developmental commit for bug # 107 -- turning off all ... Mon, 14 Jun 2010 15:20:07 GMT keesvb [564] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) fixed person problem in BootStrap, added comments to Event class, ... Mon, 14 Jun 2010 11:44:22 GMT keesvb [563] * trunk/grails-app/conf/BootStrap.groovy (modified) restored development requirement Mon, 14 Jun 2010 11:36:56 GMT keesvb [562] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) version 0.3.1: re-enabled saving and deleted >0 subjects requirement ... Mon, 14 Jun 2010 11:00:46 GMT keesvb [561] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) version 0.3.0: fixed some issues with updating boolean fields, ... Thu, 10 Jun 2010 09:43:50 GMT jahn [554] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) Refactored member 'code' of Study. Changed it from being template to ... Wed, 09 Jun 2010 23:33:37 GMT keesvb [550] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) * trunk/test/unit/dbnp/studycapturing/FileServiceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEntityTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateFieldFileTests.groovy (modified) added entity property to TemplateField; added validator to Template ... Mon, 07 Jun 2010 07:20:00 GMT roberth [536] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/test/unit/dbnp/studycapturing/EventGroupTests.groovy (added) * trunk/test/unit/dbnp/studycapturing/EventTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/TemplateEntityTests.groovy (added) * trunk/web-app/css/studies.css (modified) Samples are now shown in the study overview page. Also some tests are ... Fri, 04 Jun 2010 12:38:55 GMT duh [531] * trunk/grails-app/conf/BootStrap.groovy (modified) - fixed some of the indentation bootstrap hell... c'mon people make ... Fri, 04 Jun 2010 12:04:07 GMT gajula [530] * trunk/grails-app/conf/BootStrap.groovy (modified) plant templates-prasad Fri, 04 Jun 2010 09:20:48 GMT duh [525] * trunk/grails-app/conf/BootStrap.groovy (modified) - fixed some indentation Fri, 04 Jun 2010 08:42:28 GMT duh [524] * trunk/grails-app/conf/BootStrap.groovy (modified) - renamed 'SampleProtocol' to a more userfriendly 'Sample protocol' Thu, 03 Jun 2010 08:03:38 GMT jahn [516] * trunk/grails-app/conf/BootStrap.groovy (modified) Added two externalStudyIDs. Thu, 03 Jun 2010 06:12:06 GMT keesvb [513] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) version 0.2.3, deleted sampleTemplates field in Template as it will ... Wed, 02 Jun 2010 14:22:42 GMT duh [509] * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/pages/_confirmation.gsp (modified) * trunk/grails-app/views/wizard/pages/_samples.gsp (modified) * trunk/web-app/css (modified) - wizard saving initial version - removed main transaction as it ... Fri, 28 May 2010 14:19:06 GMT roberth [497] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/RelTime.groovy (added) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/query/selectsample.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/test/unit/dbnp/studycapturing/RelTimeTests.groovy (added) * trunk/test/unit/dbnp/studycapturing/TemplateFieldTests.groovy (modified) Implemented RELTIME parsing and showing in the wizard. Also made ... Fri, 28 May 2010 09:55:56 GMT keesvb [493] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) changed SamplingEvent definitions in Bootstrap and coupled ... Thu, 27 May 2010 14:10:12 GMT duh [488] * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - tweaked termEditorController (set lines in the proper order, ... Thu, 27 May 2010 13:57:41 GMT duh [486] * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - enabled SQL logging for postgres in 'production' - added extra ... Thu, 27 May 2010 11:13:50 GMT tabma [485] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/views/importer/common/_properties.gsp (modified) * trunk/grails-app/views/importer/index_advanced.gsp (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) * trunk/grails-app/views/importer/step2.gsp (moved) * trunk/grails-app/views/importer/step2_simple.gsp (modified) * trunk/grails-app/views/importer/step3.gsp (moved) * trunk/grails-app/views/importer/step3_simple.gsp (deleted) * trunk/grails-app/views/importer/step4.gsp (moved) * trunk/grails-app/views/importer/step4_simple.gsp (deleted) - refactored (now using configuration file where entities to be used ... Wed, 26 May 2010 08:50:53 GMT roberth [467] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/studies.css (modified) * trunk/web-app/js/jquery-callback-1.2.js (added) * trunk/web-app/js/timeline-simile (added) * trunk/web-app/js/timeline-simile/CHANGES.txt (added) * trunk/web-app/js/timeline-simile/LICENSE.txt (added) * trunk/web-app/js/timeline-simile/README.txt (added) * trunk/web-app/js/timeline-simile/custom-timeline.js (added) * trunk/web-app/js/timeline-simile/images (added) * trunk/web-app/js/timeline-simile/images/blue-circle.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom-left.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom-right.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom.png (added) * trunk/web-app/js/timeline-simile/images/bubble-left-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-left.png (added) * trunk/web-app/js/timeline-simile/images/bubble-right-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-right.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top-left.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top-right.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top.png (added) * trunk/web-app/js/timeline-simile/images/close-button.png (added) * trunk/web-app/js/timeline-simile/images/copyright-vertical.png (added) * trunk/web-app/js/timeline-simile/images/copyright.png (added) * trunk/web-app/js/timeline-simile/images/dark-blue-circle.png (added) * trunk/web-app/js/timeline-simile/images/dark-green-circle.png (added) * trunk/web-app/js/timeline-simile/images/dark-red-circle.png (added) * trunk/web-app/js/timeline-simile/images/dull-blue-circle.png (added) * trunk/web-app/js/timeline-simile/images/dull-green-circle.png (added) * trunk/web-app/js/timeline-simile/images/dull-red-circle.png (added) * trunk/web-app/js/timeline-simile/images/gray-circle.png (added) * trunk/web-app/js/timeline-simile/images/green-circle.png (added) * trunk/web-app/js/timeline-simile/images/message-bottom-left.png (added) * trunk/web-app/js/timeline-simile/images/message-bottom-right.png (added) * trunk/web-app/js/timeline-simile/images/message-left.png (added) * trunk/web-app/js/timeline-simile/images/message-right.png (added) * trunk/web-app/js/timeline-simile/images/message-top-left.png (added) * trunk/web-app/js/timeline-simile/images/message-top-right.png (added) * trunk/web-app/js/timeline-simile/images/progress-running.gif (added) * trunk/web-app/js/timeline-simile/images/red-circle.png (added) * trunk/web-app/js/timeline-simile/images/top-bubble.png (added) * trunk/web-app/js/timeline-simile/scripts (added) * trunk/web-app/js/timeline-simile/scripts/l10n (added) * trunk/web-app/js/timeline-simile/scripts/l10n/cs (added) * trunk/web-app/js/timeline-simile/scripts/l10n/cs/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/cs/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/de (added) * trunk/web-app/js/timeline-simile/scripts/l10n/de/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/de/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/en (added) * trunk/web-app/js/timeline-simile/scripts/l10n/en/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/en/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/es (added) * trunk/web-app/js/timeline-simile/scripts/l10n/es/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/es/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/fr (added) * trunk/web-app/js/timeline-simile/scripts/l10n/fr/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/fr/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/it (added) * trunk/web-app/js/timeline-simile/scripts/l10n/it/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/it/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/nl (added) * trunk/web-app/js/timeline-simile/scripts/l10n/nl/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/nl/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/ru (added) * trunk/web-app/js/timeline-simile/scripts/l10n/ru/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/ru/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/se (added) * trunk/web-app/js/timeline-simile/scripts/l10n/se/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/se/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/tr (added) * trunk/web-app/js/timeline-simile/scripts/l10n/tr/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/tr/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/vi (added) * trunk/web-app/js/timeline-simile/scripts/l10n/vi/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/vi/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/zh (added) * trunk/web-app/js/timeline-simile/scripts/l10n/zh/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/zh/timeline.js (added) * trunk/web-app/js/timeline-simile/timeline-api.js (added) * trunk/web-app/js/timeline-simile/timeline-bundle.css (added) * trunk/web-app/js/timeline-simile/timeline-bundle.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax (added) * trunk/web-app/js/timeline-simile/timeline_ajax/content (added) * trunk/web-app/js/timeline-simile/timeline_ajax/content/history.html (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-down.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-up.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-bottom-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-bottom-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-bottom.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-top-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-top-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-top.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/close-button.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/copy.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-bottom-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-bottom-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-top-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-top-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/scripts (added) * trunk/web-app/js/timeline-simile/timeline_ajax/scripts/signal.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax/simile-ajax-api.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax/simile-ajax-bundle.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax/styles (added) * trunk/web-app/js/timeline-simile/timeline_ajax/styles/graphics-ie6.css (added) * trunk/web-app/js/timeline-simile/timeline_ajax/styles/graphics.css (added) Updated study view to show the events on a timeline. Tue, 25 May 2010 14:52:24 GMT keesvb [464] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) workaround for Postgres, TEXT field are not stored properly Tue, 25 May 2010 10:26:40 GMT keesvb [461] * trunk/grails-app/conf/BootStrap.groovy (modified) changed Genotype field to a String field Tue, 25 May 2010 09:18:21 GMT roberth [458] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) Subject class changed again to improve performance. Also updated ... Mon, 24 May 2010 21:48:40 GMT keesvb [455] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_start.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/css/wizard.css (modified) Reverting Subject optimization as it breaks the study create wizard ... Fri, 21 May 2010 08:04:49 GMT roberth [454] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/views/study/list_extended.gsp (deleted) * trunk/grails-app/views/study/show.gsp (modified) Improved study list to be able to handle one or more studies. Also ... Thu, 20 May 2010 15:02:22 GMT roberth [453] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/studies.css (added) Improved study list, study detail view and study comparison. Also ... Thu, 20 May 2010 09:29:06 GMT duh [444] * trunk/grails-app/conf/Config.groovy (modified) - extended gscf configuration for importer (importableEntities) - ... Thu, 20 May 2010 09:16:19 GMT duh [443] * trunk/grails-app/conf/Config.groovy (modified) - added configuration for gscf Wed, 19 May 2010 16:12:42 GMT roberth [442] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonAffiliationController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/create.gsp (modified) * trunk/grails-app/views/personAffiliation/edit.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personAffiliation/show.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) Updated studies list and added institute and department properties to ... Mon, 17 May 2010 15:11:29 GMT keesvb [424] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) updated to grails 1.3.1, changed PPSH Gender choice in Bootstrap to ... Mon, 17 May 2010 14:32:57 GMT duh [423] * trunk/grails-app/conf/BootStrap.groovy (modified) - commented bootstrap bug Mon, 17 May 2010 13:26:48 GMT keesvb [421] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) cleaned up BootStrap and re-added Samples, updated study/show to also ... Tue, 11 May 2010 14:41:05 GMT keesvb [408] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) reverted changes which removed domain fields from the domain classes, ... Tue, 11 May 2010 13:35:21 GMT keesvb [406] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/test/integration/gscf/StudyTests.groovy (added) * trunk/test/integration/gscf/SubjectTests.groovy (modified) added study tests, skip study adds when in test environment in ... Tue, 04 May 2010 15:45:23 GMT keesvb [394] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) added ontology specifications to Subject species and Sample material ... Tue, 04 May 2010 15:03:21 GMT keesvb [392] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/list_extended.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) switched back from the fancy 'integrate domain fields as system ... Wed, 28 Apr 2010 14:28:39 GMT duh [389] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/web-app/css/wizard.css (modified) * trunk/web-app/css/wizard.min.css (modified) - reverted changes of revisions 386, 387 and 388 as they completely ... Tue, 27 Apr 2010 13:53:06 GMT roberth [386] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/DomainTemplateField.groovy (added) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/test/unit/dbnp/studycapturing/DomainTemplateFieldTests.groovy (added) Updated the template entities to be able to return domain fields, ... Tue, 27 Apr 2010 07:13:47 GMT keesvb [384] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) FINALLY found a possible way to integrate the domain fields as ... Mon, 26 Apr 2010 16:36:49 GMT duh [383] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/common/_error.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) - initial event template Mon, 26 Apr 2010 14:53:36 GMT roberth [382] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/views/person/create.gsp (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personRole/list.gsp (modified) * trunk/web-app/css/default_style.css (modified) Updated the fields of person to contain title, gender, prefix and ... Mon, 26 Apr 2010 12:31:00 GMT roberth [379] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonRoleController.groovy (modified) * trunk/grails-app/views/person/create.gsp (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/create.gsp (modified) * trunk/grails-app/views/personAffiliation/edit.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personAffiliation/show.gsp (modified) * trunk/grails-app/views/personRole/create.gsp (modified) * trunk/grails-app/views/personRole/edit.gsp (modified) * trunk/grails-app/views/personRole/list.gsp (modified) * trunk/grails-app/views/personRole/show.gsp (modified) * trunk/web-app/css/default_style.css (modified) Updated the person, personrole and personaffiliation view templates ... Fri, 23 Apr 2010 09:26:57 GMT keesvb [375] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) added giveDomainFields to TemplateEntity entities, fixed some ... Fri, 23 Apr 2010 09:02:31 GMT duh [374] * trunk/application.properties (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) - added crypto plugin - implemented blowfish encryption in Wizard ... Thu, 22 Apr 2010 07:31:50 GMT roberth [370] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/list_extended.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) Updated studies list to handle the new data model. Updated the ... Wed, 21 Apr 2010 15:26:21 GMT duh [367] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/common/_feedback.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/css/default_style.css (modified) * trunk/web-app/images/icons/famfamfam/application.png (added) * trunk/web-app/images/icons/famfamfam/application_add.png (added) * trunk/web-app/images/icons/famfamfam/application_cascade.png (added) * trunk/web-app/images/icons/famfamfam/application_delete.png (added) * trunk/web-app/images/icons/famfamfam/application_double.png (added) * trunk/web-app/images/icons/famfamfam/application_error.png (added) * trunk/web-app/images/icons/famfamfam/application_form.png (added) * trunk/web-app/images/icons/famfamfam/application_form_add.png (added) * trunk/web-app/images/icons/famfamfam/application_form_delete.png (added) * trunk/web-app/images/icons/famfamfam/application_form_edit.png (added) * trunk/web-app/images/icons/famfamfam/application_form_magnify.png (added) * trunk/web-app/images/icons/famfamfam/application_get.png (added) * trunk/web-app/images/icons/famfamfam/application_go.png (added) * trunk/web-app/images/icons/famfamfam/application_home.png (added) * trunk/web-app/images/icons/famfamfam/application_key.png (added) * trunk/web-app/images/icons/famfamfam/application_lightning.png (added) * trunk/web-app/images/icons/famfamfam/application_link.png (added) * trunk/web-app/images/icons/famfamfam/application_osx.png (added) * trunk/web-app/images/icons/famfamfam/application_osx_terminal.png (added) * trunk/web-app/images/icons/famfamfam/application_put.png (added) * trunk/web-app/images/icons/famfamfam/application_side_boxes.png (added) * trunk/web-app/images/icons/famfamfam/application_side_contract.png (added) * trunk/web-app/images/icons/famfamfam/application_side_expand.png (added) * trunk/web-app/images/icons/famfamfam/application_side_list.png (added) * trunk/web-app/images/icons/famfamfam/application_side_tree.png (added) * trunk/web-app/images/icons/famfamfam/application_split.png (added) * trunk/web-app/images/icons/famfamfam/application_tile_horizontal.png (added) * trunk/web-app/images/icons/famfamfam/application_tile_vertical.png (added) * trunk/web-app/images/icons/famfamfam/application_view_columns.png (added) * trunk/web-app/images/icons/famfamfam/application_view_detail.png (added) * trunk/web-app/images/icons/famfamfam/application_view_gallery.png (added) * trunk/web-app/images/icons/famfamfam/application_view_icons.png (added) * trunk/web-app/images/icons/famfamfam/application_view_list.png (added) * trunk/web-app/images/icons/famfamfam/application_view_tile.png (added) * trunk/web-app/images/icons/famfamfam/application_xp.png (added) * trunk/web-app/images/icons/famfamfam/application_xp_terminal.png (added) * trunk/web-app/images/icons/famfamfam/bug.png (added) * trunk/web-app/images/icons/famfamfam/bug_add.png (added) * trunk/web-app/images/icons/famfamfam/bug_delete.png (added) * trunk/web-app/images/icons/famfamfam/bug_edit.png (added) * trunk/web-app/images/icons/famfamfam/bug_error.png (added) * trunk/web-app/images/icons/famfamfam/bug_go.png (added) * trunk/web-app/images/icons/famfamfam/bug_link.png (added) * trunk/web-app/images/icons/famfamfam/layout.png (added) * trunk/web-app/images/icons/famfamfam/layout_add.png (added) * trunk/web-app/images/icons/famfamfam/layout_content.png (added) * trunk/web-app/images/icons/famfamfam/layout_delete.png (added) * trunk/web-app/images/icons/famfamfam/layout_edit.png (added) * trunk/web-app/images/icons/famfamfam/layout_error.png (added) * trunk/web-app/images/icons/famfamfam/layout_header.png (added) * trunk/web-app/images/icons/famfamfam/layout_link.png (added) * trunk/web-app/images/icons/famfamfam/layout_sidebar.png (added) * trunk/web-app/js/wizard.js (modified) - commented buggy bootstrap code - refactored wizard subject page - ... Wed, 21 Apr 2010 13:36:37 GMT keesvb [366] * trunk/grails-app/conf/BootStrap.groovy (modified) added missing fields for study template Wed, 21 Apr 2010 10:02:29 GMT keesvb [364] * trunk/grails-app/conf/BootStrap.groovy (modified) getting studies back in bootstrap Tue, 20 Apr 2010 15:41:20 GMT duh [360] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) - added the fancy speech plugin to the rep Tue, 20 Apr 2010 08:49:54 GMT duh [353] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/data/Term.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) - refactored termField tag - refactored subjects page - added terms ... Mon, 19 Apr 2010 11:05:48 GMT duh [349] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/css/wizard.min.css (modified) * trunk/web-app/js/ontology-chooser.js (modified) * trunk/web-app/js/ontology-chooser.min.js (modified) - added more templates to bootstrap - added a 300ms delay to ... Mon, 19 Apr 2010 08:36:25 GMT duh [347] * trunk/grails-app/conf/BootStrap.groovy (modified) - refactored bootstrap, commented out everything, put academic study ... Mon, 19 Apr 2010 08:27:26 GMT duh [346] * trunk/grails-app/conf/BootStrap.groovy (modified) - commented out the bootstrap as it breaks everything Mon, 12 Apr 2010 14:19:28 GMT keesvb [339] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) added plant template to BootStrap Thu, 08 Apr 2010 12:20:13 GMT duh [331] * trunk/grails-app/conf/BootStrap.groovy (modified) - added a dummy integer template field to the academic study template ... Wed, 07 Apr 2010 12:03:10 GMT tabma [329] * trunk/grails-app/conf/BootStrap.groovy (modified) - added Human study to Bootstrap for testing with importer Tue, 06 Apr 2010 10:37:22 GMT duh [327] * trunk/grails-app/conf/Searchable.groovy (modified) - changed searchable config Wed, 31 Mar 2010 18:04:08 GMT duh [323] * trunk/grails-app/conf/Searchable.groovy (modified) - fixed the issue with deploying the production war on tomcat ... Fri, 26 Mar 2010 15:36:05 GMT duh [320] * trunk/application.properties (modified) * trunk/grails-app/conf/Searchable.groovy (added) - fixed searchable errors in tomcat deployment Mon, 22 Mar 2010 10:38:25 GMT keesvb [290] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/EventDescriptionController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/common/_partial.gsp (deleted) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/eventDescription/showMyProtocolFilled.gsp (modified) debugged EventDescription.save, added comment field for template ... Wed, 17 Mar 2010 13:29:09 GMT duh [278] * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - fixed study wizard saving Wed, 17 Mar 2010 13:17:56 GMT duh [277] * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/views/wizard/pages/_start.gsp (modified) - enabled SQL debugging Mon, 15 Mar 2010 21:40:37 GMT keesvb [269] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/views/study/list_extended.gsp (modified) upgraded to webflow plugin 1.2.1, added templates to BootStrap, ... Mon, 15 Mar 2010 08:28:43 GMT keesvb [266] * trunk/grails-app/conf/BootStrap.groovy (modified) changed bootstrapping reason Fri, 12 Mar 2010 15:12:53 GMT duh [260] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/wizard/index.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/css/cupertino (added) * trunk/web-app/css/cupertino/images (added) * trunk/web-app/css/cupertino/images/ui-anim_basic_16x16.gif (added) * trunk/web-app/css/cupertino/images/ui-bg_diagonals-thick_90_eeeeee_40x40.png (added) * trunk/web-app/css/cupertino/images/ui-bg_flat_15_cd0a0a_40x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_glass_100_e4f1fb_1x400.png (added) * trunk/web-app/css/cupertino/images/ui-bg_glass_50_3baae3_1x400.png (added) * trunk/web-app/css/cupertino/images/ui-bg_glass_80_d7ebf9_1x400.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-hard_100_f2f5f7_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-hard_70_000000_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-soft_100_deedf7_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-soft_25_ffef8f_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-icons_2694e8_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_2e83ff_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_3d80b3_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_72a7cf_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_ffffff_256x240.png (added) * trunk/web-app/css/cupertino/jquery-ui-1.8rc3.custom.css (added) * trunk/web-app/css/wizard.css (modified) * trunk/web-app/js/jquery-ui-1.8rc3.custom.min.js (added) * trunk/web-app/js/ontology-chooser.js (added) * trunk/web-app/js/table-editor.js (modified) * trunk/web-app/js/wizard.js (modified) - upgraded jquery-ui to latest version - implemented ontology ... Wed, 10 Mar 2010 13:40:58 GMT keesvb [253] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/BaseController.groovy (deleted) * trunk/grails-app/controllers/ProtocolController.groovy (deleted) * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/controllers/TermController.groovy (deleted) * trunk/grails-app/controllers/dbnp/data (added) * trunk/grails-app/controllers/dbnp/data/OntologyController.groovy (moved) * trunk/grails-app/controllers/dbnp/studycapturing/ProtocolController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/ProtocolParameterController.groovy (moved) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (moved) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateSubjectFieldController.groovy (deleted) * trunk/grails-app/views/sandbox/index.gsp (modified) Cleaned up BootStrap (removed accidental multiple addition of ... Mon, 08 Mar 2010 17:29:14 GMT duh [247] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/DataSource.groovy (modified) * trunk/grails-app/conf/NimbleBootStrap.groovy (modified) * trunk/grails-app/conf/NimbleConfig.groovy (modified) * trunk/grails-app/conf/NimbleSecurityFilters.groovy (modified) * trunk/grails-app/conf/NimbleUrlMappings.groovy (modified) * trunk/grails-app/conf/UrlMappings.groovy (modified) * trunk/grails-app/conf/spring/resources.groovy (modified) * trunk/grails-app/controllers/BaseController.groovy (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/LoadController.groovy (modified) * trunk/grails-app/controllers/OntologyController.groovy (modified) * trunk/grails-app/controllers/ProtocolController.groovy (modified) * trunk/grails-app/controllers/ProtocolParameterController.groovy (modified) * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/controllers/SearchableController.groovy (modified) * trunk/grails-app/controllers/StudyController.groovy (modified) * trunk/grails-app/controllers/TermController.groovy (modified) * trunk/grails-app/controllers/dbnp/clinicaldata/ClinicalAssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/clinicaldata/ClinicalMeasurementController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/EventController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/EventDescriptionController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/ProtocolController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SubjectController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateSubjectFieldController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalAssay.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalAssayInstance.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalFloatData.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalMeasurement.groovy (modified) * trunk/grails-app/domain/dbnp/clinicaldata/ClinicalStringData.groovy (modified) * trunk/grails-app/domain/dbnp/data/FeatureBase.groovy (modified) * trunk/grails-app/domain/dbnp/data/FeatureType.groovy (modified) * trunk/grails-app/domain/dbnp/data/Ontology.groovy (modified) * trunk/grails-app/domain/dbnp/data/Term.groovy (modified) * trunk/grails-app/domain/dbnp/importer/Column.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportMapping.groovy (modified) * trunk/grails-app/domain/dbnp/importer/MappingColumn.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayModule.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayType.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Compound.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventDescription.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/EventGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/ParameterStringListItem.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Protocol.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/ProtocolParameter.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/ProtocolParameterType.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SubjectGroup.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldListItem.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) * trunk/grails-app/domain/nimble/Profile.groovy (modified) * trunk/grails-app/domain/nimble/User.groovy (modified) * trunk/grails-app/services/dbnp/clinicaldata/ClinicalDataLayerService.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/common/_eventDescriptionTableRows.gsp (modified) * trunk/grails-app/views/common/_jquerytmsetup.gsp (modified) * trunk/grails-app/views/common/_login_panel.gsp (modified) * trunk/grails-app/views/common/_partial.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/error.gsp (modified) * trunk/grails-app/views/event/create.gsp (modified) * trunk/grails-app/views/event/createForEventDescription.gsp (modified) * trunk/grails-app/views/event/create_1.gsp (modified) * trunk/grails-app/views/event/create_auto.gsp (modified) * trunk/grails-app/views/event/create_timepicker.gsp (modified) * trunk/grails-app/views/event/edit.gsp (modified) * trunk/grails-app/views/event/list.gsp (modified) * trunk/grails-app/views/event/partial.gsp (modified) * trunk/grails-app/views/event/show.gsp (modified) * trunk/grails-app/views/eventDescription/create.gsp (modified) * trunk/grails-app/views/eventDescription/edit.gsp (modified) * trunk/grails-app/views/eventDescription/list.gsp (modified) * trunk/grails-app/views/eventDescription/show.gsp (modified) * trunk/grails-app/views/eventDescription/showMyProtocolEmpty.gsp (modified) * trunk/grails-app/views/eventDescription/showMyProtocolFilled.gsp (modified) * trunk/grails-app/views/eventDescription/showProtocolParameters.gsp (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/importer/common/_preview.gsp (modified) * trunk/grails-app/views/importer/common/_properties.gsp (modified) * trunk/grails-app/views/importer/index.gsp (modified) * trunk/grails-app/views/importer/step1.gsp (modified) * trunk/grails-app/views/importer/step2.gsp (modified) * trunk/grails-app/views/language/create.gsp (modified) * trunk/grails-app/views/language/edit.gsp (modified) * trunk/grails-app/views/language/list.gsp (modified) * trunk/grails-app/views/language/show.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/layouts/nimble.gsp (modified) * trunk/grails-app/views/load/index.gsp (modified) * trunk/grails-app/views/query/index.gsp (modified) * trunk/grails-app/views/query/results.gsp (modified) * trunk/grails-app/views/query/selectsample.gsp (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/searchable/index.gsp (modified) * trunk/grails-app/views/study/create.gsp (modified) * trunk/grails-app/views/study/edit.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/list_backup.gsp (modified) * trunk/grails-app/views/study/list_extended.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/study/show_backup.gsp (modified) * trunk/grails-app/views/templates/nimble/help/_accountcreationpolicy.gsp (modified) * trunk/grails-app/views/templates/nimble/help/_passwordpolicy.gsp (modified) * trunk/grails-app/views/templates/nimble/help/_usernamepolicy.gsp (modified) * trunk/grails-app/views/templates/nimble/login/_login.gsp (modified) * trunk/grails-app/views/templates/nimble/mail/_accountregistration_email.gsp (modified) * trunk/grails-app/views/templates/nimble/mail/_emailchange_email.gsp (modified) * trunk/grails-app/views/templates/nimble/mail/_forgottenpassword_email.gsp (modified) * trunk/grails-app/views/templates/nimble/mail/_forgottenpassword_external_email.gsp (modified) * trunk/grails-app/views/templates/nimble/navigation/_topnavigation.gsp (modified) * trunk/grails-app/views/templates/nimble/profile/_banner.gsp (modified) * trunk/grails-app/views/templates/nimble/profile/_currentstatus.gsp (modified) * trunk/grails-app/views/templates/nimble/profile/_emailupdated.gsp (modified) * trunk/grails-app/views/templates/nimble/profile/_left.gsp (modified) * trunk/grails-app/views/templates/nimble/profile/_miniprofile.gsp (modified) * trunk/grails-app/views/templates/nimble/profile/_socialmedia.gsp (modified) * trunk/grails-app/views/wizard/common/_error.gsp (modified) * trunk/grails-app/views/wizard/common/_navigation.gsp (modified) * trunk/grails-app/views/wizard/common/_tabs.gsp (modified) * trunk/grails-app/views/wizard/common/_wizard.gsp (modified) * trunk/grails-app/views/wizard/index.gsp (modified) * trunk/grails-app/views/wizard/pages/_assays.gsp (modified) * trunk/grails-app/views/wizard/pages/_confirmation.gsp (modified) * trunk/grails-app/views/wizard/pages/_done.gsp (modified) * trunk/grails-app/views/wizard/pages/_eventDescriptions.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_groups.gsp (modified) * trunk/grails-app/views/wizard/pages/_protocols.gsp (modified) * trunk/grails-app/views/wizard/pages/_samples.gsp (modified) * trunk/grails-app/views/wizard/pages/_start.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/grails-app/views/wizard/pages/_templates.gsp (modified) * trunk/grails-app/views/wizard/pages/_timeline.gsp (modified) * trunk/web-app/js/development.js (modified) * trunk/web-app/js/jquery-ui-1.7.2.custom.min.js (modified) * trunk/web-app/js/jquery.qtip-1.0.0-rc3.min.js (modified) * trunk/web-app/js/login_panel.js (modified) * trunk/web-app/js/swfobject.js (modified) * trunk/web-app/js/table-editor.js (modified) * trunk/web-app/js/timeline.js (modified) * trunk/web-app/js/timepicker-0.2.1.js (modified) * trunk/web-app/js/topnav.js (modified) * trunk/web-app/js/wizard.js (modified) - set keyword expansion Mon, 08 Mar 2010 17:25:07 GMT duh [246] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Protocol.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_eventDescriptions.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) - increased session lifetime to 7 days - improved wizard study ... Fri, 05 Mar 2010 15:46:29 GMT keesvb [239] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) updated TemplateEntity with a correct setFieldValue, also added ... Fri, 05 Mar 2010 13:20:10 GMT keesvb [236] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) updated TemplateEntity to include empty maps, also added the ... Fri, 05 Mar 2010 11:32:58 GMT jahn [235] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/ParameterStringListItem.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/ProtocolParameter.groovy (modified) The options that protocol parameters can take on are no longer ... Wed, 03 Mar 2010 16:18:22 GMT keesvb [232] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) adjusted Event-Sample relationship to go into EventGroup, added ...