# # ChangeLog for / # # Generated by Trac 1.0.2 # Jan 15, 2021, 3:33:36 PM Wed, 26 May 2010 16:05:56 GMT duh [481] * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - added JavaScript variable 'baseUrl' containing the grails base ... Wed, 26 May 2010 15:40:41 GMT jahn [480] * trunk/grails-app/controllers/RestController.groovy (added) * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (modified) * trunk/src/groovy/dbnp (added) * trunk/src/groovy/dbnp/rest (added) * trunk/src/groovy/dbnp/rest/CCMCommunicationManager.groovy (added) * trunk/src/java/dbnp/data/CleanDataLayer.java (modified) Providing some methods for showing that REST/JSON actually works for ... Wed, 26 May 2010 14:53:45 GMT roberth [479] * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) * trunk/grails-app/views/publication/add.gsp (added) * trunk/grails-app/views/publication/show.gsp (modified) * trunk/web-app/js/publication-chooser.js (added) * trunk/web-app/js/publication-chooser.pubmed.js (added) Created an interface to PubMed for searching publications. This is ... Wed, 26 May 2010 14:36:19 GMT vinlud [478] * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (added) * trunk/grails-app/views/simpleQuery (added) * trunk/grails-app/views/simpleQuery/common (added) * trunk/grails-app/views/simpleQuery/common/_query.gsp (added) * trunk/grails-app/views/simpleQuery/mainPage.gsp (added) * trunk/web-app/css/simpleQuery.css (added) * trunk/web-app/js/simpleQuery.js (added) Initial structure simpleQuery Wed, 26 May 2010 13:49:45 GMT duh [477] * trunk/web-app/css/wizard.css (modified) * trunk/web-app/css/wizard.min.css (modified) * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - table columns are now dynamically scaled Wed, 26 May 2010 13:16:41 GMT keesvb [476] * trunk/application.properties (modified) dub this version 0.2.1 Wed, 26 May 2010 13:13:34 GMT duh [475] * trunk/web-app/js/SelectAddMore.js (modified) * trunk/web-app/js/SelectAddMore.min.js (modified) - borderless iFrame fix for IE Wed, 26 May 2010 13:05:56 GMT duh [474] * trunk/web-app/css/wizard.css (modified) * trunk/web-app/css/wizard.min.css (modified) * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - fixed IE7 compatibility issues (CSS & Javascript) - resolved bug #63 Wed, 26 May 2010 12:14:30 GMT duh [473] * trunk/web-app/js/SelectAddMore.js (modified) - style was not passed properly after bugfix... Wed, 26 May 2010 11:27:08 GMT duh [472] * trunk/web-app/css/wizard.min.css (modified) * trunk/web-app/js/SelectAddMore.js (modified) * trunk/web-app/js/SelectAddMore.min.js (modified) * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - resolved bug #63 Wed, 26 May 2010 10:27:22 GMT roberth [471] * trunk/web-app/css/wizard.css (modified) Adjusted the wizard css in order to render the question mark right in IE7 Wed, 26 May 2010 10:16:05 GMT duh [470] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) -removed some debug lines Wed, 26 May 2010 10:10:54 GMT duh [469] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/pages/_groups.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) - bugfix #59, #60 & #61 --> all related to eachother - refactored ... Wed, 26 May 2010 10:04:33 GMT roberth [468] * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) Solved show method raising an exception with every call Wed, 26 May 2010 08:50:53 GMT roberth [467] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/studies.css (modified) * trunk/web-app/js/jquery-callback-1.2.js (added) * trunk/web-app/js/timeline-simile (added) * trunk/web-app/js/timeline-simile/CHANGES.txt (added) * trunk/web-app/js/timeline-simile/LICENSE.txt (added) * trunk/web-app/js/timeline-simile/README.txt (added) * trunk/web-app/js/timeline-simile/custom-timeline.js (added) * trunk/web-app/js/timeline-simile/images (added) * trunk/web-app/js/timeline-simile/images/blue-circle.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom-left.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom-right.png (added) * trunk/web-app/js/timeline-simile/images/bubble-bottom.png (added) * trunk/web-app/js/timeline-simile/images/bubble-left-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-left.png (added) * trunk/web-app/js/timeline-simile/images/bubble-right-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-right.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top-arrow.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top-left.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top-right.png (added) * trunk/web-app/js/timeline-simile/images/bubble-top.png (added) * trunk/web-app/js/timeline-simile/images/close-button.png (added) * trunk/web-app/js/timeline-simile/images/copyright-vertical.png (added) * trunk/web-app/js/timeline-simile/images/copyright.png (added) * trunk/web-app/js/timeline-simile/images/dark-blue-circle.png (added) * trunk/web-app/js/timeline-simile/images/dark-green-circle.png (added) * trunk/web-app/js/timeline-simile/images/dark-red-circle.png (added) * trunk/web-app/js/timeline-simile/images/dull-blue-circle.png (added) * trunk/web-app/js/timeline-simile/images/dull-green-circle.png (added) * trunk/web-app/js/timeline-simile/images/dull-red-circle.png (added) * trunk/web-app/js/timeline-simile/images/gray-circle.png (added) * trunk/web-app/js/timeline-simile/images/green-circle.png (added) * trunk/web-app/js/timeline-simile/images/message-bottom-left.png (added) * trunk/web-app/js/timeline-simile/images/message-bottom-right.png (added) * trunk/web-app/js/timeline-simile/images/message-left.png (added) * trunk/web-app/js/timeline-simile/images/message-right.png (added) * trunk/web-app/js/timeline-simile/images/message-top-left.png (added) * trunk/web-app/js/timeline-simile/images/message-top-right.png (added) * trunk/web-app/js/timeline-simile/images/progress-running.gif (added) * trunk/web-app/js/timeline-simile/images/red-circle.png (added) * trunk/web-app/js/timeline-simile/images/top-bubble.png (added) * trunk/web-app/js/timeline-simile/scripts (added) * trunk/web-app/js/timeline-simile/scripts/l10n (added) * trunk/web-app/js/timeline-simile/scripts/l10n/cs (added) * trunk/web-app/js/timeline-simile/scripts/l10n/cs/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/cs/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/de (added) * trunk/web-app/js/timeline-simile/scripts/l10n/de/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/de/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/en (added) * trunk/web-app/js/timeline-simile/scripts/l10n/en/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/en/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/es (added) * trunk/web-app/js/timeline-simile/scripts/l10n/es/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/es/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/fr (added) * trunk/web-app/js/timeline-simile/scripts/l10n/fr/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/fr/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/it (added) * trunk/web-app/js/timeline-simile/scripts/l10n/it/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/it/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/nl (added) * trunk/web-app/js/timeline-simile/scripts/l10n/nl/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/nl/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/ru (added) * trunk/web-app/js/timeline-simile/scripts/l10n/ru/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/ru/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/se (added) * trunk/web-app/js/timeline-simile/scripts/l10n/se/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/se/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/tr (added) * trunk/web-app/js/timeline-simile/scripts/l10n/tr/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/tr/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/vi (added) * trunk/web-app/js/timeline-simile/scripts/l10n/vi/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/vi/timeline.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/zh (added) * trunk/web-app/js/timeline-simile/scripts/l10n/zh/labellers.js (added) * trunk/web-app/js/timeline-simile/scripts/l10n/zh/timeline.js (added) * trunk/web-app/js/timeline-simile/timeline-api.js (added) * trunk/web-app/js/timeline-simile/timeline-bundle.css (added) * trunk/web-app/js/timeline-simile/timeline-bundle.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax (added) * trunk/web-app/js/timeline-simile/timeline_ajax/content (added) * trunk/web-app/js/timeline-simile/timeline_ajax/content/history.html (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-down.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-arrow-point-up.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-bottom-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-bottom-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-bottom.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-top-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-top-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/bubble-top.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/close-button.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/copy.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-bottom-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-bottom-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-top-left.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/images/message-top-right.png (added) * trunk/web-app/js/timeline-simile/timeline_ajax/scripts (added) * trunk/web-app/js/timeline-simile/timeline_ajax/scripts/signal.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax/simile-ajax-api.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax/simile-ajax-bundle.js (added) * trunk/web-app/js/timeline-simile/timeline_ajax/styles (added) * trunk/web-app/js/timeline-simile/timeline_ajax/styles/graphics-ie6.css (added) * trunk/web-app/js/timeline-simile/timeline_ajax/styles/graphics.css (added) Updated study view to show the events on a timeline. Tue, 25 May 2010 15:42:31 GMT duh [466] * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - fixed issue with wizard.min.js Tue, 25 May 2010 14:55:45 GMT keesvb [465] * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) typing error Tue, 25 May 2010 14:52:24 GMT keesvb [464] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) workaround for Postgres, TEXT field are not stored properly Tue, 25 May 2010 13:59:33 GMT duh [463] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - resolved [#62] changes are not saved in study create wizard Tue, 25 May 2010 10:28:04 GMT duh [462] * trunk/application.properties (modified) - version 0.2.0 ! Tue, 25 May 2010 10:26:40 GMT keesvb [461] * trunk/grails-app/conf/BootStrap.groovy (modified) changed Genotype field to a String field Tue, 25 May 2010 10:06:11 GMT duh [460] * trunk/grails-app/views/wizard/pages/_groups.gsp (modified) * trunk/web-app/js/table-editor.js (modified) * trunk/web-app/js/table-editor.min.js (modified) - fixed issue with the table editor - view for grouping page Tue, 25 May 2010 10:05:59 GMT vinlud [459] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/domain/dbnp/data/Term.groovy (modified) Check empty string ontology selector Tue, 25 May 2010 09:18:21 GMT roberth [458] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) Subject class changed again to improve performance. Also updated ... Tue, 25 May 2010 09:05:52 GMT duh [457] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/web-app/js/wizard.js (modified) - fixed improved tooltip functionality Tue, 25 May 2010 07:17:18 GMT vinlud [456] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) Messaging & checks ontology selector Mon, 24 May 2010 21:48:40 GMT keesvb [455] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_start.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/css/wizard.css (modified) Reverting Subject optimization as it breaks the study create wizard ... Fri, 21 May 2010 08:04:49 GMT roberth [454] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/views/study/list_extended.gsp (deleted) * trunk/grails-app/views/study/show.gsp (modified) Improved study list to be able to handle one or more studies. Also ... Thu, 20 May 2010 15:02:22 GMT roberth [453] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/web-app/css/studies.css (added) Improved study list, study detail view and study comparison. Also ... Thu, 20 May 2010 13:30:19 GMT duh [452] * trunk/web-app/css/wizard.css (modified) * trunk/web-app/css/wizard.min.css (modified) - updated css Thu, 20 May 2010 13:07:29 GMT duh [451] * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_groups.gsp (modified) * trunk/web-app/css (modified) * trunk/web-app/css/wizard.css (modified) - developmental commit Thu, 20 May 2010 12:57:31 GMT tabma [450] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - first page of simple import wizard working with entity-/templatefilter Thu, 20 May 2010 12:56:52 GMT tabma [449] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/index_simple.gsp (modified) - first page of simple import wizard working with entity-/templatefilter Thu, 20 May 2010 12:01:57 GMT duh [448] * trunk (modified) - no more iml shite Thu, 20 May 2010 12:00:08 GMT duh [447] * trunk/gscf-grailsPlugins.iml (deleted) - removed debug line Thu, 20 May 2010 11:10:32 GMT duh [446] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) - removed debug line Thu, 20 May 2010 11:08:43 GMT duh [445] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) - bugfix: ontology selects not displaying proper value Thu, 20 May 2010 09:29:06 GMT duh [444] * trunk/grails-app/conf/Config.groovy (modified) - extended gscf configuration for importer (importableEntities) - ... Thu, 20 May 2010 09:16:19 GMT duh [443] * trunk/grails-app/conf/Config.groovy (modified) - added configuration for gscf Wed, 19 May 2010 16:12:42 GMT roberth [442] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonAffiliationController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/create.gsp (modified) * trunk/grails-app/views/personAffiliation/edit.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personAffiliation/show.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) Updated studies list and added institute and department properties to ... Wed, 19 May 2010 15:10:01 GMT keesvb [441] * trunk/lib/jaxrpc.jar (added) * trunk/lib/ols-client.jar (added) added missing libraries for Ontocat Wed, 19 May 2010 14:39:48 GMT keesvb [440] * trunk/test/integration/gscf/OntologyTests.groovy (modified) sorry, forgot to delete an accolade Wed, 19 May 2010 14:36:21 GMT keesvb [439] * trunk/test/integration/gscf/OntologyTests.groovy (modified) updated Ontology tests Wed, 19 May 2010 12:37:00 GMT duh [438] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) * trunk/web-app/css/dialog.css (modified) * trunk/web-app/js/SelectAddMore.js (modified) - term editor initial version Wed, 19 May 2010 11:14:39 GMT roberth [437] * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (added) * trunk/grails-app/views/publication/create.gsp (added) * trunk/grails-app/views/publication/edit.gsp (added) * trunk/grails-app/views/publication/list.gsp (added) * trunk/grails-app/views/publication/show.gsp (added) * trunk/test/unit/dbnp/studycapturing/PublicationControllerTests.groovy (added) Added publication controller and views Wed, 19 May 2010 11:05:19 GMT duh [436] * trunk/grails-app/views/layouts/dialog.gsp (modified) * trunk/grails-app/views/termEditor/pages/terms.gsp (modified) * trunk/web-app/css/wizard.css (modified) - added radio form element style for wizard - dialog.gsp did not ... Tue, 18 May 2010 15:15:46 GMT duh [435] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) - trying to fetch template fields when no template is set breaks the ... Tue, 18 May 2010 15:06:01 GMT duh [434] * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) - changed handling of date fields Tue, 18 May 2010 14:56:32 GMT duh [433] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/pages/_groups.gsp (modified) - fixed issue with the event view and controller logic where 1) ... Tue, 18 May 2010 14:42:11 GMT duh [432] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/common/_wizard.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) - events page now seperates 'events' from 'samplingEvents' - ... Tue, 18 May 2010 09:39:32 GMT duh [431] * trunk/grails-app/controllers/dbnp/studycapturing/TermEditorController.groovy (modified) - term editor has been using 'ontologies' instead of 'ontology' as a ... Tue, 18 May 2010 09:30:00 GMT duh [430] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - tweaked error messages in wizard Tue, 18 May 2010 09:26:21 GMT duh [429] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/web-app/css/cupertino (added) * trunk/web-app/css/cupertino/images (added) * trunk/web-app/css/cupertino/images/ui-bg_diagonals-thick_90_eeeeee_40x40.png (added) * trunk/web-app/css/cupertino/images/ui-bg_flat_15_cd0a0a_40x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_glass_100_e4f1fb_1x400.png (added) * trunk/web-app/css/cupertino/images/ui-bg_glass_50_3baae3_1x400.png (added) * trunk/web-app/css/cupertino/images/ui-bg_glass_80_d7ebf9_1x400.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-hard_100_f2f5f7_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-hard_70_000000_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-soft_100_deedf7_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-bg_highlight-soft_25_ffef8f_1x100.png (added) * trunk/web-app/css/cupertino/images/ui-icons_2694e8_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_2e83ff_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_3d80b3_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_72a7cf_256x240.png (added) * trunk/web-app/css/cupertino/images/ui-icons_ffffff_256x240.png (added) * trunk/web-app/css/cupertino/jquery-ui-1.8.1.custom.css (added) - commit crashed, recommitting jquery-ui 1.8.1 for jquery 1.4.x Tue, 18 May 2010 09:09:55 GMT duh [428] * trunk/application.properties (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/grails-app/views/templateEditor/pages/templates.gsp (modified) * trunk/grails-app/views/wizard/index.gsp (modified) * trunk/gscf-grailsPlugins.iml (modified) * trunk/web-app/css/cupertino (deleted) * trunk/web-app/css/jquery-ui (deleted) * trunk/web-app/js/jquery-ui-1.7.2.custom.min.js (deleted) * trunk/web-app/js/jquery-ui-1.8.1.custom.min.js (added) * trunk/web-app/js/jquery-ui-1.8rc3.custom.min.js (deleted) * trunk/web-app/js/jquery.qtip-1.0.0-rc3.js (added) * trunk/web-app/js/jquery.qtip-1.0.0-rc3.min.js (modified) - upgraded jQuery plugin to 1.4.2 - fixed bug in qTip library - ... Tue, 18 May 2010 08:40:06 GMT duh [427] * trunk/gscf-grailsPlugins.iml (modified) - upgraded to 1.3.1 Tue, 18 May 2010 08:39:31 GMT duh [426] * trunk (modified) * trunk/application.properties (modified) * trunk/gscf-grailsPlugins.iml (added) - upgraded to 1.3.1 Tue, 18 May 2010 06:39:30 GMT keesvb [425] * trunk/lib/ontoCAT_v0.9.1.jar (added) * trunk/lib/xstream-1.3.1.jar (added) * trunk/test/integration/gscf/OntologyTests.groovy (modified) refactored Ontology tests, added Ontocat example as a test Mon, 17 May 2010 15:11:29 GMT keesvb [424] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) updated to grails 1.3.1, changed PPSH Gender choice in Bootstrap to ... Mon, 17 May 2010 14:32:57 GMT duh [423] * trunk/grails-app/conf/BootStrap.groovy (modified) - commented bootstrap bug Mon, 17 May 2010 14:00:43 GMT duh [422] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) - consistent debugging Mon, 17 May 2010 13:26:48 GMT keesvb [421] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/show.gsp (modified) cleaned up BootStrap and re-added Samples, updated study/show to also ... Mon, 17 May 2010 10:35:34 GMT duh [420] * trunk/web-app/images (modified) * trunk/web-app/js (modified) - deleted meuk Mon, 17 May 2010 10:19:37 GMT duh [419] * trunk/application.properties (modified) * trunk/web-app/images (modified) - upgraded project to Grails 1.3 - added ignore flags Mon, 17 May 2010 09:56:00 GMT duh [418] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/web-app/WEB-INF/tld/grails.tld (modified) * trunk/web-app/css (modified) * trunk/web-app/images (modified) * trunk/web-app/js (modified) - subjects can now be deleted properly - event grouping works - ... Wed, 12 May 2010 14:09:15 GMT tabma [417] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/index.gsp (modified) * trunk/grails-app/views/importer/index_advanced.gsp (copied) * trunk/grails-app/views/importer/index_simple.gsp (added) * trunk/grails-app/views/importer/step1_advanced.gsp (moved) * trunk/grails-app/views/importer/step1_simple.gsp (added) * trunk/grails-app/views/importer/step2_advanced.gsp (added) * trunk/grails-app/views/importer/step2_simple.gsp (moved) * trunk/grails-app/views/importer/step3_advanced.gsp (added) * trunk/grails-app/views/importer/step3_simple.gsp (moved) * trunk/grails-app/views/importer/step4_advanced.gsp (added) * trunk/grails-app/views/importer/step4_simple.gsp (moved) - split up the templates in 'simple' and 'advanced' and created a new ... Wed, 12 May 2010 13:38:46 GMT duh [416] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/i18n/messages.properties (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) - updated Events to handle constraints properly - updated event wizard Wed, 12 May 2010 11:23:35 GMT tabma [415] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/domain/dbnp/importer/ImportMapping.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) - refactored code and templates of the Importer Wizard, now makes use ... Wed, 12 May 2010 10:12:33 GMT duh [414] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) - moved term / ontology setter to TemplateEntity for transparent ... Wed, 12 May 2010 09:48:05 GMT duh [413] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) - removed a domain field did not work properly (example: setting '' ... Tue, 11 May 2010 15:16:59 GMT keesvb [412] * trunk/test/integration/gscf/StudyTests.groovy (modified) added tests for Study domain fields Tue, 11 May 2010 14:58:23 GMT duh [411] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - workin in progress (but working!) Tue, 11 May 2010 14:51:06 GMT keesvb [410] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) another obvious bugfix in fieldExists Tue, 11 May 2010 14:47:22 GMT keesvb [409] * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) OK, that refactoring was too enthusiastic, switching back getField() ... Tue, 11 May 2010 14:41:05 GMT keesvb [408] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) reverted changes which removed domain fields from the domain classes, ... Tue, 11 May 2010 14:01:58 GMT duh [407] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - implemented ontologyterm handler code in the subject page, note ... Tue, 11 May 2010 13:35:21 GMT keesvb [406] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/test/integration/gscf/StudyTests.groovy (added) * trunk/test/integration/gscf/SubjectTests.groovy (modified) added study tests, skip study adds when in test environment in ... Tue, 11 May 2010 13:21:22 GMT duh [405] * trunk/application.properties (modified) - reverted jquery-1.4.2.1 as it breaks jquery related stuff... this ... Tue, 11 May 2010 13:13:25 GMT duh [404] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) - wizard controller temporary commit Tue, 11 May 2010 09:18:22 GMT duh [403] * trunk/application.properties (modified) - upgraded jquery plugin Tue, 11 May 2010 09:00:09 GMT keesvb [402] * trunk/test/integration/gscf/SubjectTests.groovy (modified) some minor changes to subject tests Tue, 11 May 2010 08:25:11 GMT duh [401] * trunk/web-app/js/wizard.js (modified) * trunk/web-app/js/wizard.min.js (modified) fixed (jslint) and minified javascript Tue, 11 May 2010 07:26:40 GMT keesvb [400] * trunk/test/integration/gscf/SubjectTests.groovy (modified) split out subject tests better to distinguish between different problems Mon, 10 May 2010 14:32:45 GMT duh [399] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) * trunk/web-app/js/wizard.js (modified) - changed term / ontology fields to select elements instead - todo: ... Mon, 10 May 2010 14:29:04 GMT keesvb [398] * trunk/grails-app/domain/dbnp/data/Ontology.groovy (modified) * trunk/grails-app/domain/dbnp/data/Term.groovy (modified) * trunk/test/integration/gscf (added) * trunk/test/integration/gscf/OntologyTests.groovy (added) * trunk/test/integration/gscf/SubjectTests.groovy (added) added Ontology/Term and Subject integration tests Fri, 07 May 2010 12:53:11 GMT duh [397] * trunk/grails-app/controllers/LoadController.groovy (modified) * trunk/grails-app/controllers/dbnp/data/OntologyController.groovy (modified) * trunk/grails-app/controllers/dbnp/data/TermController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/EventController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonAffiliationController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonRoleController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SubjectController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/TemplateController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/AssayType.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Compound.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonAffiliation.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/PersonRole.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Publication.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/SamplingEvent.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/StudyPerson.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateFieldType.groovy (modified) * trunk/grails-app/services/dbnp/clinicaldata/ClinicalDataLayerService.groovy (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) - reformatted source code - added mega huge big ASCII comments to ... Fri, 07 May 2010 12:24:27 GMT duh [396] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) - fixed incomplete implementation of domain fields (getters, setters ... Fri, 07 May 2010 09:16:30 GMT duh [395] * trunk/application.properties (modified) - nadd neutralizer 0.3 (linux compatible)! Tue, 04 May 2010 15:45:23 GMT keesvb [394] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) added ontology specifications to Subject species and Sample material ... Tue, 04 May 2010 15:05:09 GMT duh [393] * trunk/web-app/js/ontology-chooser.js (modified) - text error Tue, 04 May 2010 15:03:21 GMT keesvb [392] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/study/list_extended.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) switched back from the fancy 'integrate domain fields as system ... Tue, 04 May 2010 09:39:17 GMT duh [391] * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) - removed obsolete/unused '-name' trailing part from ontology elements Mon, 03 May 2010 13:55:29 GMT duh [390] * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) - refactored TemplateEntity to check for and handle event + domain ... Wed, 28 Apr 2010 14:28:39 GMT duh [389] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_study.gsp (modified) * trunk/web-app/css/wizard.css (modified) * trunk/web-app/css/wizard.min.css (modified) - reverted changes of revisions 386, 387 and 388 as they completely ... Tue, 27 Apr 2010 14:00:08 GMT roberth [388] * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) Removed DomainTemplateField references from Events, Samples and Subjects Tue, 27 Apr 2010 13:54:11 GMT roberth [387] * trunk/grails-app/domain/dbnp/studycapturing/DomainTemplateField.groovy (deleted) * trunk/test/unit/dbnp/studycapturing/DomainTemplateFieldTests.groovy (deleted) Temporary 'domain template fields' were actually not necessary in the ... Tue, 27 Apr 2010 13:53:06 GMT roberth [386] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/DomainTemplateField.groovy (added) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Subject.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/views/sandbox/index.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) * trunk/test/unit/dbnp/studycapturing/DomainTemplateFieldTests.groovy (added) Updated the template entities to be able to return domain fields, ... Tue, 27 Apr 2010 08:25:43 GMT duh [385] * trunk/grails-app/controllers/dbnp/studycapturing/TemplateEditorController.groovy (modified) * trunk/grails-app/views/templateEditor/pages/templates.gsp (modified) - template editor view used Study as entity instead of the ... Tue, 27 Apr 2010 07:13:47 GMT keesvb [384] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Event.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Template.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateEntity.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/TemplateField.groovy (modified) FINALLY found a possible way to integrate the domain fields as ... Mon, 26 Apr 2010 16:36:49 GMT duh [383] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/WizardController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/wizard/common/_error.gsp (modified) * trunk/grails-app/views/wizard/pages/_events.gsp (modified) * trunk/grails-app/views/wizard/pages/_subjects.gsp (modified) - initial event template Mon, 26 Apr 2010 14:53:36 GMT roberth [382] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/PersonController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Person.groovy (modified) * trunk/grails-app/views/person/create.gsp (modified) * trunk/grails-app/views/person/edit.gsp (modified) * trunk/grails-app/views/person/list.gsp (modified) * trunk/grails-app/views/person/show.gsp (modified) * trunk/grails-app/views/personAffiliation/list.gsp (modified) * trunk/grails-app/views/personRole/list.gsp (modified) * trunk/web-app/css/default_style.css (modified) Updated the fields of person to contain title, gender, prefix and ...