# # ChangeLog for / # # Generated by Trac 1.0.2 # Jan 21, 2021, 3:26:23 AM Tue, 29 Mar 2011 13:09:01 GMT robert@… [1681] * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) Why doesn't CI redeploy? Tue, 29 Mar 2011 13:06:32 GMT robert@… [1680] * trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) * trunk/web-app/js/studywizard.js (modified) Solving problems with HTML tags around plain text output Tue, 29 Mar 2011 13:00:13 GMT robert@… [1679] * trunk/web-app/js/studywizard.js (modified) Test commit to solve publicationchooser problems Tue, 29 Mar 2011 12:30:12 GMT robert@… [1678] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/assays.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/existingSamples.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/missingFields.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/samples.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/study.gsp (modified) * trunk/web-app/css/simplewizard.css (modified) * trunk/web-app/js/simpleWizard.js (modified) Added entity names above table editor in simple wizard and added ... Mon, 28 Mar 2011 10:35:23 GMT robert@… [1677] * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) Small fix for simple wizard importer Mon, 28 Mar 2011 09:30:01 GMT t.w.abma@… [1676] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - first page in importer wizard, study shows [no code] when study ... Mon, 28 Mar 2011 08:58:49 GMT t.w.abma@… [1675] * trunk/grails-app/views/importer/pages/_page_one.gsp (modified) - changed check for environment on fileimport page; when not test- ... Fri, 25 Mar 2011 17:21:17 GMT business@… [1674] * trunk/grails-app/views/home/index.gsp (modified) small correction Thu, 24 Mar 2011 09:10:37 GMT robert@… [1673] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/config-dbnpdemo.properties (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) Added default mail sender to the configuration (#342) and improved ... Wed, 23 Mar 2011 13:36:00 GMT work@… [1672] * tags/0.7.0 (copied) tagging 0.7.0 Wed, 23 Mar 2011 13:27:29 GMT work@… [1671] * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) - removed debug lines Wed, 23 Mar 2011 13:17:14 GMT work@… [1670] * trunk/application.properties (modified) to 0.7.0 Wed, 23 Mar 2011 12:32:02 GMT work@… [1669] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/config-ci.properties (modified) * trunk/grails-app/conf/config-dbnpdemo.properties (modified) * trunk/grails-app/conf/config-dbnptest.properties (modified) * trunk/grails-app/conf/config-development.properties (modified) * trunk/grails-app/conf/config-nmcdsptest.properties (modified) * trunk/grails-app/conf/config-production.properties (modified) * trunk/grails-app/conf/config-test.properties (modified) * trunk/grails-app/conf/config-www.properties (modified) no more gmails Wed, 23 Mar 2011 12:28:40 GMT robert@… [1668] * trunk/grails-app/views/simpleWizard/simpleWizard/samples.gsp (modified) * trunk/web-app/js/advancedQueryResults.js (modified) Small bugfix Wed, 23 Mar 2011 12:11:48 GMT work@… [1667] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) - tried to resolve #342 but cannot fix the issue due to the mail ... Wed, 23 Mar 2011 11:19:59 GMT work@… [1666] * trunk/grails-app/views/home/index.gsp (modified) - a bit more spacing Wed, 23 Mar 2011 10:38:59 GMT work@… [1665] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - resolves #376 Wed, 23 Mar 2011 10:25:45 GMT work@… [1664] * trunk/application.properties (modified) - gdt to 0.0.28, resolves #361 Wed, 23 Mar 2011 10:22:53 GMT work@… [1663] * trunk/grails-app/views/home/index.gsp (modified) - typo Wed, 23 Mar 2011 10:06:41 GMT work@… [1662] * trunk/grails-app/views/home/index.gsp (modified) * trunk/web-app/css/default_style.css (modified) - changed lorem ipsum into introductionary text Tue, 22 Mar 2011 22:16:33 GMT work@… [1661] * trunk/grails-app/conf/Config.groovy (modified) - partly reverted the previous change (else instead of else if) Tue, 22 Mar 2011 22:15:05 GMT work@… [1660] * trunk/test/unit/SearchableControllerTests.groovy (deleted) * trunk/test/unit/dbnp/query/QueryControllerTests.groovy (deleted) * trunk/test/unit/dbnp/query/SimpleQueryControllerTests.groovy (deleted) - removed obsolete test cases Tue, 22 Mar 2011 16:45:42 GMT s.h.sikkema@… [1659] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/views/assay/selectAssay.gsp (modified) * trunk/grails-app/views/assay/selectFields.gsp (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) Measurements are selected by default in assay excel exporter Tue, 22 Mar 2011 15:33:49 GMT t.w.abma@… [1658] * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/views/importer/pages/_page_one.gsp (modified) * trunk/test/webtest/gscf/ImportWizardWebTests.groovy (copied) * trunk/web-app/webtestfiles (added) * trunk/web-app/webtestfiles/NTC_Experiment_test4.xls (added) - importer wizard webtest working - native file input HTML element ... Tue, 22 Mar 2011 13:03:03 GMT work@… [1657] * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) - resolved issue #372 Tue, 22 Mar 2011 08:56:05 GMT t.w.abma@… [1656] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) - added 'hack' to fix the file upload via Ajax by stripping HTML from ... Mon, 21 Mar 2011 14:04:22 GMT work@… [1655] * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/UserController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) make sure all json methods also set a proper json header Mon, 21 Mar 2011 09:34:04 GMT robert@… [1654] * trunk/grails-app/controllers/dbnp/studycapturing/FileController.groovy (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/samples.gsp (modified) * trunk/web-app/js/studywizard.js (modified) Fixed a bug in uploading files. The bug appeared in the simple ... Fri, 18 Mar 2011 15:06:07 GMT work@… [1653] * trunk/grails-app/controllers/generic/installation/SetupController.groovy (modified) - config file stuff into it's page logic Fri, 18 Mar 2011 14:55:45 GMT work@… [1652] * trunk/grails-app/views/searchable (deleted) - gone with searchable Fri, 18 Mar 2011 14:32:42 GMT work@… [1651] * trunk/application.properties (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/controllers/SearchableController.groovy (deleted) * trunk/grails-app/controllers/generic/installation/SetupController.groovy (modified) * trunk/grails-app/views/setup/elements (added) * trunk/grails-app/views/setup/elements/_create_path.gsp (added) * trunk/grails-app/views/setup/index.gsp (modified) * trunk/grails-app/views/setup/pages/_configuration_location.gsp (moved) * trunk/grails-app/views/setup/pages/_database.gsp (moved) * trunk/web-app/css/setupwizard.css (added) - removed searchable - worked on the initial version of the setup wizard Fri, 18 Mar 2011 13:10:28 GMT work@… [1650] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - fixed an issue where subject data was not saved within a refresh Fri, 18 Mar 2011 12:29:47 GMT work@… [1649] * trunk/grails-app/views/advancedQuery/assayresults.gsp (modified) * trunk/grails-app/views/advancedQuery/index.gsp (modified) query -> search Fri, 18 Mar 2011 12:24:14 GMT work@… [1648] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/generic (added) * trunk/grails-app/controllers/generic/installation (added) * trunk/grails-app/controllers/generic/installation/SetupController.groovy (added) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/setup (added) * trunk/grails-app/views/setup/common (added) * trunk/grails-app/views/setup/common/_ajaxflow.gsp (added) * trunk/grails-app/views/setup/common/_navigation.gsp (added) * trunk/grails-app/views/setup/common/_on_page.gsp (added) * trunk/grails-app/views/setup/common/_page_footer.gsp (added) * trunk/grails-app/views/setup/common/_page_header.gsp (added) * trunk/grails-app/views/setup/common/_please_wait.gsp (added) * trunk/grails-app/views/setup/common/_refresh_flow.gsp (added) * trunk/grails-app/views/setup/common/_tabs.gsp (added) * trunk/grails-app/views/setup/index.gsp (added) * trunk/grails-app/views/setup/pages (added) * trunk/grails-app/views/setup/pages/_error.gsp (added) * trunk/grails-app/views/setup/pages/_final_page.gsp (added) * trunk/grails-app/views/setup/pages/_page_four.gsp (added) * trunk/grails-app/views/setup/pages/_page_one.gsp (added) * trunk/grails-app/views/setup/pages/_page_three.gsp (added) * trunk/grails-app/views/setup/pages/_page_two.gsp (added) - advanced query page only shows previous query links if there are ... Fri, 18 Mar 2011 11:37:01 GMT work@… [1647] * trunk/grails-app/views/common/_topnav.gsp (modified) - changed admin topnav Fri, 18 Mar 2011 11:13:52 GMT work@… [1646] * trunk/grails-app/controllers/dbnp/query/QueryController.groovy (deleted) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (deleted) * trunk/grails-app/views/advancedQuery/index.gsp (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/query (deleted) * trunk/grails-app/views/simpleQuery (deleted) - removed obsolete SimpleQuery - removed obsolete Query - changed ... Fri, 18 Mar 2011 10:34:22 GMT work@… [1645] * trunk/grails-app/views/study/createTimelineBandsJs.gsp (modified) - test commit reponse header in gsp Thu, 17 Mar 2011 20:01:40 GMT work@… [1644] * trunk/grails-app/conf/Config.groovy (modified) - test Thu, 17 Mar 2011 16:42:00 GMT work@… [1643] * trunk/INSTALLATION (modified) * trunk/NOTICE (modified) updated gscf instructions Thu, 17 Mar 2011 14:58:41 GMT work@… [1642] * trunk/application.properties (modified) - templateEditor now scrolls down and focusses on the name field when ... Thu, 17 Mar 2011 14:18:15 GMT work@… [1641] * trunk/application.properties (modified) - gdt up to 0.0.26 (varchar 255 bugfix) Thu, 17 Mar 2011 14:16:24 GMT work@… [1640] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/views/studyWizard/pages/_done.gsp (modified) - added simple study support (study page) Thu, 17 Mar 2011 11:02:05 GMT work@… [1639] * trunk/application.properties (modified) - changed 0.6.6.1 into 0.6.7 as the deploy script does not expect a 4 ... Wed, 16 Mar 2011 17:03:06 GMT work@… [1638] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - resolves #364 Wed, 16 Mar 2011 10:37:08 GMT work@… [1637] * trunk/application.properties (modified) - up to 0.6.6.1 (see #359) Tue, 15 Mar 2011 15:42:01 GMT work@… [1636] * trunk/application.properties (modified) - gdt to 0.0.25: - template editor blue screen is fixed - 0 ... Tue, 15 Mar 2011 13:06:25 GMT work@… [1635] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/BootStrapAuthentication.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/ExampleStudies.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/ExampleTemplates.groovy (modified) - added checks to Grom calls if Grom is available so we can uninstall ... Tue, 15 Mar 2011 11:10:43 GMT work@… [1634] * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) - event templates were not refreshed properly after update (ticket to ... Mon, 14 Mar 2011 15:36:39 GMT s.h.sikkema@… [1633] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) Fixed 'Assay has no value (null)' error in assay exporter Mon, 14 Mar 2011 14:49:07 GMT s.h.sikkema@… [1632] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) Fixed 'Assay has no value (null)' error in assay exporter Mon, 14 Mar 2011 13:55:21 GMT s.h.sikkema@… [1631] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) Fixed 'Assay has no value (null)' error in assay exporter Fri, 11 Mar 2011 14:33:45 GMT work@… [1630] * trunk/grails-app/conf/config-dbnpdemo.properties (modified) * trunk/grails-app/conf/config-dbnptest.properties (modified) - disabled gmail for dbnp servers Fri, 11 Mar 2011 14:25:22 GMT work@… [1629] * tags/0.6.6 (copied) tagging 0.6.6 release Fri, 11 Mar 2011 14:06:04 GMT work@… [1628] * trunk/application.properties (modified) * trunk/grails-app/controllers/dbnp/setup (deleted) * trunk/grails-app/views/setup (deleted) - removed obosolete setup wizard - 0.6.6 milestone Fri, 11 Mar 2011 13:14:29 GMT work@… [1627] * trunk/grails-app/conf/BaseFilters.groovy (modified) - deny all access to /query except in development Fri, 11 Mar 2011 12:42:05 GMT work@… [1626] * trunk/grails-app/conf/BaseFilters.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) - added initial support of a return URI; not working properly though... Fri, 11 Mar 2011 11:55:57 GMT work@… [1625] * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) - improved quicksearch Fri, 11 Mar 2011 11:43:38 GMT work@… [1624] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - reverted addition of unique() in 1621 as this doubles with the ... Fri, 11 Mar 2011 11:40:10 GMT work@… [1623] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) - resolves #354 Fri, 11 Mar 2011 10:51:01 GMT robert@… [1622] * trunk/grails-app/views/simpleWizard/simpleWizard/overview.gsp (modified) Small fix in simple wizard overview Fri, 11 Mar 2011 10:02:30 GMT robert@… [1621] * trunk/grails-app/controllers/SandboxController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/study/list.gsp (modified) Fixed some bugs in simple wizard and study view page Thu, 10 Mar 2011 15:06:02 GMT work@… [1620] * trunk/application.properties (modified) - gdt to 0.0.23 Thu, 10 Mar 2011 14:53:33 GMT work@… [1619] * trunk/grails-app/views/home/index.gsp (modified) spinner Thu, 10 Mar 2011 12:34:15 GMT robert@… [1618] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) Solved issue #351 Thu, 10 Mar 2011 12:06:54 GMT robert@… [1617] * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/views/exporter/index.gsp (modified) Bugfix in advanced query Thu, 10 Mar 2011 11:29:12 GMT work@… [1616] * trunk/grails-app/conf/DataSource.groovy (modified) - commiting a hibernate performance tweak, all still seems to work? Thu, 10 Mar 2011 10:33:08 GMT work@… [1615] * trunk/application.properties (modified) * trunk/grails-app/conf/BaseFilters.groovy (modified) - fixed cloning of templates (gscf issue #345) Thu, 10 Mar 2011 10:02:53 GMT work@… [1614] * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) - fixed indentation Thu, 10 Mar 2011 08:55:36 GMT robert@… [1613] * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) Removed some printlns Thu, 10 Mar 2011 08:54:52 GMT robert@… [1612] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) Update simple wizard to import subject without a name correctly and ... Wed, 09 Mar 2011 21:24:41 GMT robert@… [1611] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/finish.gsp (modified) Improved simple study wizard Wed, 09 Mar 2011 20:28:13 GMT robert@… [1610] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/columns.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/missingFields.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/samples.gsp (modified) Improved simple import wizard to be able to import events Wed, 09 Mar 2011 16:28:45 GMT robert@… [1609] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/common/_topnav.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/columns.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/missingFields.gsp (modified) * trunk/grails-app/views/simpleWizard/simpleWizard/samples.gsp (modified) * trunk/grails-app/views/study/list.gsp (modified) * trunk/grails-app/views/study/show.gsp (modified) Improved simple editing wizard Wed, 09 Mar 2011 14:56:26 GMT robert@… [1608] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleController.groovy (deleted) * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/SimpleService.groovy (deleted) * trunk/grails-app/views/simpleWizard/assays.gsp (deleted) * trunk/grails-app/views/simpleWizard/columns.gsp (deleted) * trunk/grails-app/views/simpleWizard/complexStudy.gsp (deleted) * trunk/grails-app/views/simpleWizard/existingSamples.gsp (deleted) * trunk/grails-app/views/simpleWizard/missingFields.gsp (deleted) * trunk/grails-app/views/simpleWizard/overview.gsp (deleted) * trunk/grails-app/views/simpleWizard/samples.gsp (deleted) * trunk/grails-app/views/simpleWizard/save.gsp (deleted) * trunk/grails-app/views/simpleWizard/simpleWizard (added) * trunk/grails-app/views/simpleWizard/simpleWizard/assays.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/columns.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/complexStudy.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/existingSamples.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/finish.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/missingFields.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/overview.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/samples.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/save.gsp (added) * trunk/grails-app/views/simpleWizard/simpleWizard/study.gsp (added) * trunk/grails-app/views/simpleWizard/study.gsp (deleted) Fixed bug with hibernate and transactional services in the simple wizard Wed, 09 Mar 2011 09:17:30 GMT work@… [1607] * trunk/application.properties (modified) - gdt to 0.0.21, fixed a js issue in the term editor Tue, 08 Mar 2011 18:04:01 GMT s.h.sikkema@… [1606] * trunk/grails-app/services/dbnp/studycapturing/SimpleService.groovy (modified) added import ... Tue, 08 Mar 2011 17:04:12 GMT s.h.sikkema@… [1605] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/SimpleService.groovy (added) commit for Robert: see if webflow works when all logic is moved to ... Tue, 08 Mar 2011 17:01:16 GMT s.h.sikkema@… [1604] * trunk/grails-app/conf/dbnp/configuration/ExampleTemplates.groovy (modified) Added two flushes so that gscf starts correctly on an empty ... Tue, 08 Mar 2011 16:10:09 GMT work@… [1603] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) - importer wizard for studies is instantiating a study from the ... Tue, 08 Mar 2011 15:08:59 GMT work@… [1602] * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) - improved database upgrade script Tue, 08 Mar 2011 15:02:10 GMT robert@… [1601] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleController.groovy (added) * trunk/web-app/js/simpleWizard.js (modified) Tue, 08 Mar 2011 13:16:05 GMT work@… [1600] * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) added some debugging lines Tue, 08 Mar 2011 13:06:41 GMT work@… [1599] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) to e or not to e Tue, 08 Mar 2011 13:00:24 GMT work@… [1598] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) and false! Tue, 08 Mar 2011 12:59:28 GMT work@… [1597] * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) uncommented try/catch block Tue, 08 Mar 2011 10:20:31 GMT robert@… [1596] * trunk/grails-app/controllers/dbnp/query/AdvancedQueryController.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleCommunicationService.groovy (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) Solved #344 - retrieving module data is now done using POST Mon, 07 Mar 2011 17:31:52 GMT work@… [1595] * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) - some database upgrade scripts were always being executed, ... Mon, 07 Mar 2011 14:28:25 GMT robert@… [1594] * trunk/grails-app/conf/DatabaseUpgrade.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/ExampleStudies.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyWizardController.groovy (modified) * trunk/grails-app/controllers/nmc/PilotController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Assay.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/views/assay/create.gsp (modified) * trunk/grails-app/views/assay/edit.gsp (modified) * trunk/grails-app/views/assay/list.gsp (modified) * trunk/grails-app/views/assay/show.gsp (modified) * trunk/grails-app/views/study/show_assays.gsp (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) Finishing touch after refactoring entity tokens (#329) Mon, 07 Mar 2011 14:02:17 GMT s.h.sikkema@… [1593] * trunk/grails-app/controllers/RestController.groovy (modified) de-commented: def beforeInterceptor = ... Mon, 07 Mar 2011 13:23:37 GMT work@… [1592] * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) - fb only on prod Mon, 07 Mar 2011 11:01:52 GMT robert@… [1591] * trunk/grails-app/controllers/dbnp/studycapturing/SimpleWizardController.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/views/simpleWizard/assays.gsp (modified) * trunk/grails-app/views/simpleWizard/columns.gsp (modified) * trunk/grails-app/views/simpleWizard/complexStudy.gsp (added) * trunk/grails-app/views/simpleWizard/existingSamples.gsp (added) * trunk/grails-app/views/simpleWizard/missingFields.gsp (modified) * trunk/grails-app/views/simpleWizard/overview.gsp (modified) * trunk/grails-app/views/simpleWizard/samples.gsp (modified) * trunk/grails-app/views/simpleWizard/save.gsp (modified) * trunk/grails-app/views/studyWizard/pages/_samples.gsp (modified) Improved simple wizard so that is can edit studies Fri, 04 Mar 2011 15:28:45 GMT work@… [1590] * trunk/application.properties (modified) * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/BuildConfig.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/ExampleStudies.groovy (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/src/groovy/dbnp/query/Search.groovy (modified) * trunk/test/integration/gscf/OntologyTests.groovy (modified) * trunk/test/integration/gscf/SubjectTests.groovy (modified) * trunk/test/webtest/gscf/CreateStudyWebTests.groovy (modified) * trunk/test/webtest/gscf/EditStudyWebTests.groovy (modified) - fixing remaining test issues Fri, 04 Mar 2011 11:34:04 GMT s.h.sikkema@… [1589] * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) Deleted 'cd..' which somehow got in there Fri, 04 Mar 2011 11:30:52 GMT s.h.sikkema@… [1588] * trunk/grails-app/conf/BootStrap.groovy (modified) * trunk/grails-app/conf/Config.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/BootStrapAuthentication.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/ExampleStudies.groovy (modified) * trunk/grails-app/conf/dbnp/configuration/ExampleTemplates.groovy (modified) * trunk/grails-app/controllers/RestController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LoginController.groovy (modified) * trunk/grails-app/controllers/dbnp/authentication/LogoutController.groovy (modified) * trunk/grails-app/controllers/dbnp/exporter/ExporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/importer/ImporterController.groovy (modified) * trunk/grails-app/controllers/dbnp/studycapturing/StudyController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Sample.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/services/dbnp/authentication/AuthenticationService.groovy (modified) * trunk/grails-app/services/dbnp/importer/ImporterService.groovy (modified) * trunk/grails-app/services/dbnp/modules/ModuleNotificationService.groovy (modified) * trunk/grails-app/taglib/dbnp/importer/ImporterTagLib.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/WizardTagLib.groovy (modified) * trunk/src/templates/artifacts/Service.groovy (modified) * trunk/test/integration/RestControllerIntegrationTests.groovy (modified) * trunk/test/integration/dbnp/query/SampleSearchTests.groovy (modified) * trunk/test/integration/dbnp/studycapturing (deleted) * trunk/test/integration/gscf/EventGroupTests.groovy (modified) * trunk/test/integration/gscf/ImporterTests.groovy (modified) * trunk/test/integration/gscf/SampleTests.groovy (modified) * trunk/test/integration/gscf/StudyTests.groovy (modified) * trunk/test/unit/RestControllerTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/AssayServiceTests.groovy (modified) * trunk/test/unit/dbnp/studycapturing/StudyTests.groovy (modified) Fixed tests (except webtests); cleaned up ... Fri, 04 Mar 2011 11:14:10 GMT s.h.sikkema@… [1587] * trunk/grails-app/conf/application.properties (deleted) Fri, 04 Mar 2011 09:08:04 GMT work@… [1586] * trunk/grails-app/views/home/index.gsp (modified) minor css change Thu, 03 Mar 2011 19:24:14 GMT work@… [1585] * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) moved text search method into Study domain Thu, 03 Mar 2011 19:02:44 GMT work@… [1584] * trunk/application.properties (modified) * trunk/grails-app/controllers/HomeController.groovy (modified) * trunk/grails-app/controllers/dbnp/query/SimpleQueryController.groovy (modified) * trunk/grails-app/domain/dbnp/authentication/SecUser.groovy (modified) * trunk/grails-app/domain/dbnp/studycapturing/Study.groovy (modified) * trunk/grails-app/views/home/index.gsp (modified) * trunk/grails-app/views/layouts/main.gsp (modified) * trunk/web-app/js/highcharts.js (added) - did some more restyling of the home page (ticket #339) - ... Wed, 02 Mar 2011 16:40:25 GMT s.h.sikkema@… [1583] * trunk/grails-app/controllers/dbnp/studycapturing/AssayController.groovy (modified) * trunk/grails-app/services/dbnp/studycapturing/AssayService.groovy (modified) * trunk/grails-app/taglib/dbnp/studycapturing/AssayExporterTagLib.groovy (added) * trunk/grails-app/views/assay/compileExportData.gsp (modified) * trunk/grails-app/views/assay/selectAssay.gsp (modified) * trunk/grails-app/views/assay/selectFields.gsp (modified) UI improvements to assay exporter (ticket #159) Wed, 02 Mar 2011 16:38:59 GMT work@… [1582] * trunk/grails-app/taglib/dbnp/studycapturing/AssayTagLib.groovy (deleted) removed the AssayTagLib by request of Siemen