Changeset 836 for trunk/grails-app/conf/BootStrapTemplates.groovy

Timestamp:

Aug 25, 2010, 9:44:58 AM (13 years ago)

Author:

keesvb

Message:

added some example assay templates, started with implementation of assay and assay group steps in wizard

File:

• trunk/grails-app/conf/BootStrapTemplates.groovy (modified) (2 diffs)

trunk/grails-app/conf/BootStrapTemplates.groovy

@@ -591 +591 @@
                 println ".adding plant sampling event template"
                 def plantSamplingEventTemplate = new Template(
-                        name: 'Plant-sample ',
+                        name: 'Plant-sample',
                         description: 'plant sample ',
                         entity: dbnp.studycapturing.SamplingEvent,
@@ -629 +629 @@
                 .with { if (!validate()) { errors.each { println it} } else save()}
 
+
+                // assay templates
+
+                def assayDescriptionField = new TemplateField(
+                                name: 'Description',
+                            comment: 'add general assay information here',
+                                entity: Assay,
+                                type: TemplateFieldType.STRING
+                );
+                assayDescriptionField.with { if (!validate()) { errors.each { println it} } else save()}
+
+                println ".adding clinical chemistry assay template"
+                def ccAssayTemplate = new Template(
+                        name: 'Clinical chemistry assay',
+                        description: 'Clinical chemistry assay stored in a SAM module',
+                        entity: dbnp.studycapturing.Assay
+                )
+                .addToFields(assayDescriptionField)
+                .with { if (!validate()) { errors.each { println it} } else save()}
+
+                println ".adding metabolomics assay template"
+                def metAssayTemplate = new Template(
+                        name: 'Metabolomics assay',
+                        description: 'Metabolomics assay stored in a metabolomics module',
+                        entity: dbnp.studycapturing.Assay
+                )
+                .addToFields(assayDescriptionField)
+                .addToFields(
+                        new TemplateField(
+                                name: 'Spectrometry technique',
+                            comment: 'Select the used metabolomics technique',
+                                entity: Assay,
+                                type: TemplateFieldType.STRINGLIST,
+                            listEntries: [
+                                        new TemplateFieldListItem(name: 'GC/MS'),
+                                new TemplateFieldListItem(name: 'LC/MS'),
+                                new TemplateFieldListItem(name: 'NMR'),
+                                new TemplateFieldListItem(name: 'HPLC')
+                            ])
+                )
+                .with { if (!validate()) { errors.each { println it} } else save()}
         }