Changeset 631

Timestamp:

Jun 29, 2010, 3:36:04 PM (13 years ago)

Author:

jahn

Message:

Cleaned up CommunicationManager? and put it in uniform use and package
structure with the dbnp.rest used in the Simple Assay Module.

Location:

trunk

Files:

• grails-app/controllers/RestController.groovy (modified) (5 diffs)
• src/groovy/dbnp/rest/CommunicationManager.groovy (deleted)
• src/groovy/dbnp/rest/common (added)
• src/groovy/dbnp/rest/common/CommunicationManager.groovy (added)
• src/groovy/dbnp/rest/gscf (added)
• src/groovy/dbnp/rest/gscf/SAMtoGSCFRestWrapper.groovy (added)

trunk/grails-app/controllers/RestController.groovy

@@ -52 +52 @@
         * Provide a list of all subjects belonging to a study. 
         *
-        * Examlpe call of the getAssays REST resource: http://localhost:8080/gscf/rest/getSubjects/json?externalStudyID=1
-        *
         * @param  externalStudyID
         * @return as JSON object list of subject names 
@@ -72 +70 @@
         * Provide a list of all assays for a given study
         *
-        * Example for calling this resource: http://localhost:8080/gscf/rest/getAssays/json?externalStudyID=2
-        *
         * @param  externalStudyID 
         * @return list of assays as JSON object 
@@ -91 +87 @@
         * Provide all samples of a given Assay. The result is an enriched list with additional informatin on a sample. 
         *
-        * Example for calling this resource: http://localhost:8080/gscf/rest/getAssays/json?externalStudyID=2
-        *
         * @param  assayID (externalAssayID of some Assay in GSCF)
         * @return list of element of  Sample.name x Sample.material x Sample.subject.name x Sample.Event.name x Sample.Event.time
@@ -100 +94 @@
                 if( params.externalAssayID ) {
                         def id = Long.parseLong(params.externalAssayID)
+                        Assay.findAll().each{ println it }
                         Assay.find( "from Assay as a where externalAssayID=?",[id]).getSamples().each { sample ->
                                 def item = [ 
@@ -105 +100 @@
                                         'material'      : sample.material.name,
                                         'subject'       : sample.parentSubject.name,
-                                        'event'         : sample.parentEvent.template.name,  // get the freaking name 
+                                        'event'         : sample.parentEvent.template.name,
                                         'startTime'     : sample.parentEvent.getDurationString()
                                 ]