Changeset 479

Timestamp:

May 26, 2010, 4:53:45 PM (14 years ago)

Author:

roberth

Message:

Created an interface to PubMed? for searching publications. This is intended to be used in the study creation wizard. See publication/add method

Location:

trunk

Files:

• grails-app/controllers/dbnp/studycapturing/PublicationController.groovy (modified) (1 diff)
• grails-app/views/publication/add.gsp (added)
• grails-app/views/publication/show.gsp (modified) (1 diff)
• web-app/js/publication-chooser.js (added)
• web-app/js/publication-chooser.pubmed.js (added)

trunk/grails-app/controllers/dbnp/studycapturing/PublicationController.groovy

@@ -14 +14 @@
     def index = {
         redirect(action: "list", params: params)
+    }
+
+    /**
+     * Shows a form to add a new publication by searching pubmed
+     */
+    def add = {}
+
+    /**
+     * Adds publication selected from pubmed
+     */
+    def createFromPubmed = {
+        // instantiate term with parameters
+        def publication = new Publication(
+            title: params.get( 'publication-title' ),
+            authorsList: params.get( 'publication-authorsList' ),
+            pubMedID: params.get( 'publication-pubMedID' ),
+            DOI: params.get( 'publication-doi' )
+        )
+
+        def message;
+        def errors = '';
+
+        // validate term
+        if (publication.validate()) {
+            println "Publication validated correctly"
+            publication.save()
+            message = "Publication added to the system"
+        } else {
+            println "Publication validation failed"
+            println "errors:"
+            publication.errors.getAllErrors().each() {
+                println it
+            }
+            errors = publications.errors.getAllErrors.join( ', ' );
+            message = "Publication addition failed"
+        }
+
+        render( 'view': 'add', model:[ message: message, errors: errors ] );
     }
 

trunk/grails-app/views/publication/show.gsp

@@ -50 +50 @@
                             <td valign="top" class="name"><g:message code="publication.DOI.label" default="DOI" /></td>
 
-                            <td valign="top" class="value">${fieldValue(bean: publicationInstance, field: "DOI")}</td>
+                            <td valign="top" class="value">
+                              <g:if test="${publicationInstance.DOI}">
+                                <a href="http://dx.doi.org/${fieldValue(bean: publicationInstance, field: "DOI")}">
+                                  ${fieldValue(bean: publicationInstance, field: "DOI")}
+                                </a>
+                              </g:if>
+                            </td>
 
                         </tr>