Changeset 375 for trunk/grails-app/conf
- Timestamp:
- Apr 23, 2010, 11:26:57 AM (13 years ago)
- File:
-
- 1 edited
-
trunk/grails-app/conf/BootStrap.groovy (modified) (12 diffs)
Legend:
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trunk/grails-app/conf/BootStrap.groovy
r370 r375 248 248 def genotypeTypeField = new TemplateField( 249 249 name: 'Genotype type',type: TemplateFieldType.STRINGLIST, 250 listEntries: [new TemplateFieldListItem(name:'transgenic'), 250 listEntries: [new TemplateFieldListItem(name:'wildtype'), 251 new TemplateFieldListItem(name:'transgenic'), 251 252 new TemplateFieldListItem(name:'knock-out'), 252 253 new TemplateFieldListItem(name:'knock-in')]) … … 259 260 def studyTemplate = new Template( 260 261 name: 'Academic study', entity: dbnp.studycapturing.Study) 261 //.addToFields(new TemplateField(name: 'Description',type: TemplateFieldType.TEXT))262 .addToFields(new TemplateField(name: 'Description',type: TemplateFieldType.TEXT)) 262 263 .addToFields(new TemplateField(name: 'Study code',type: TemplateFieldType.STRING)) 263 264 .addToFields(new TemplateField(name: 'Objectives',type: TemplateFieldType.TEXT)) … … 339 340 340 341 // Human sample template 342 println ".adding human sample template..." 341 343 def humanSampleTemplate = new Template( 342 344 name: 'Human tissue sample', entity: dbnp.studycapturing.Sample) … … 348 350 349 351 //Plant template 352 println ".adding plant template..." 350 353 def plantTemplate = new Template( 351 354 name: 'Plant template', entity: dbnp.studycapturing.Subject) … … 389 392 .with { if (!validate()) { errors.each { println it} } else save()} 390 393 394 println ".adding plant sample template..." 391 395 def plantSampleTemplate = new Template( 392 396 name: 'Plant sample', entity: dbnp.studycapturing.Sample) … … 398 402 399 403 400 // Event template 404 // Event templates 405 println ".adding event templates..." 401 406 def dietTreatmentTemplate = new Template( 402 407 name: 'Diet treatment ', entity: dbnp.studycapturing.Event) 403 408 .addToFields(sampleDescriptionField) 404 409 .addToFields(new TemplateField( 405 name: 'Diet', type: TemplateFieldType.STRING)) 410 name: 'Diet', type: TemplateFieldType.STRINGLIST, 411 listEntries: [new TemplateFieldListItem(name:'10% fat (palm oil)'),new TemplateFieldListItem(name: '45% fat (palm oil)')])) 406 412 .with { if (!validate()) { errors.each { println it} } else save()} 407 413 … … 410 416 .addToFields(sampleDescriptionField) 411 417 .addToFields(new TemplateField( 412 name: 'Compound', type: TemplateFieldType.STRING)) 418 name: 'Compound', type: TemplateFieldType.STRING, 419 listEntries: [new TemplateFieldListItem(name:'Vehicle'),new TemplateFieldListItem(name: 'Leptin')])) 413 420 .with { if (!validate()) { errors.each { println it} } else save()} 414 421 … … 456 463 */ 457 464 // studies 465 println ".adding NuGO PPS3 leptin example study..." 458 466 def exampleStudy = new Study( 459 467 template: studyTemplate, … … 464 472 startDate: Date.parse('yyyy-MM-dd','2007-12-11') 465 473 ) 466 //.setFieldValue( 'Description', "C57Bl/6 mice were fed a high fat (45 en%) or low fat (10 en%) diet after a four week run-in on low fat diet. After 1 week 10 mice that received a low fat diet were given an IP leptin challenge and 10 mice of the low-fat group received placebo injections. The same procedure was performed with mice that were fed the high-fat diet. After 4 weeks the procedure was repeated. In total 80 mice were culled." )467 474 .with { if (!validate()) { errors.each { println it} } else save()} 468 475 476 exampleStudy.setFieldValue( 'Description', "C57Bl/6 mice were fed a high fat (45 en%) or low fat (10 en%) diet after a four week run-in on low fat diet. After 1 week 10 mice that received a low fat diet were given an IP leptin challenge and 10 mice of the low-fat group received placebo injections. The same procedure was performed with mice that were fed the high-fat diet. After 4 weeks the procedure was repeated. In total 80 mice were culled." ) 477 exampleStudy.save() 478 479 println ".adding NuGO PPSH example study..." 469 480 def exampleHumanStudy = new Study( 470 template: humanTemplate,481 template: studyTemplate, 471 482 title:"Human example template", 472 483 code:"Human example code", … … 475 486 startDate: Date.parse('yyyy-MM-dd','2007-12-11') 476 487 ) 477 //.setFieldValue( 'Description', "C57Bl/6 mice were fed a high fat (45 en%) or low fat (10 en%) diet after a four week run-in on low fat diet. After 1 week 10 mice that received a low fat diet were given an IP leptin challenge and 10 mice of the low-fat group received placebo injections. The same procedure was performed with mice that were fed the high-fat diet. After 4 weeks the procedure was repeated. In total 80 mice were culled." )478 488 .with { if (!validate()) { errors.each { println it} } else save()} 489 490 exampleHumanStudy.setFieldValue( 'Description', "C57Bl/6 mice were fed a high fat (45 en%) or low fat (10 en%) diet after a four week run-in on low fat diet. After 1 week 10 mice that received a low fat diet were given an IP leptin challenge and 10 mice of the low-fat group received placebo injections. The same procedure was performed with mice that were fed the high-fat diet. After 4 weeks the procedure was repeated. In total 80 mice were culled." ) 491 exampleHumanStudy.save() 479 492 480 493 def evLF = new Event( … … 483 496 template: dietTreatmentTemplate 484 497 ) 485 .setFieldValue( 'Diet','10% fat (palm oil)' )486 498 .with { if (!validate()) { errors.each { println it} } else save()} 499 evLF.setFieldValue( 'Diet','10% fat (palm oil)' ) 500 evLF.save(flush:true) 501 // TODO: find out why Diet is not set and Compound is 487 502 488 503 def evHF = new Event( … … 625 640 .setFieldValue("Age (weeks)", 17) 626 641 .setFieldValue("Cage", "" + (int)(x/2)) 627 .with { if (!validate()) { errors.each { println it} } else save( )}642 .with { if (!validate()) { errors.each { println it} } else save(flush:true)} 628 643 629 644 exampleStudy.addToSubjects(currentSubject)
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