Changeset 1261 for trunk/test

Timestamp:

Dec 13, 2010, 11:50:28 AM (10 years ago)

Author:

s.h.sikkema@…

Message:

Changed jumbar layout to simple iframe for modules

Location:

trunk/test/unit/dbnp/studycapturing

Files:

• AssayControllerTests.groovy (modified) (3 diffs)
• StudyControllerTests.groovy (modified) (2 diffs)

trunk/test/unit/dbnp/studycapturing/AssayControllerTests.groovy

@@ -2 +2 @@
 
 import grails.test.*
+
+import dbnp.data.Term
 
 /**
@@ -20 +22 @@
     protected void setUp() {
         super.setUp()
+
+        mockDomain(Term,          [ new Term(id: 1, name: 'Human')])
+
+        mockDomain(TemplateField, [ new TemplateField(id: 1, name: 'tf1', type: TemplateFieldType.STRING),
+                                    new TemplateField(id: 2, name: 'tf2', type: TemplateFieldType.STRING),
+                                    new TemplateField(id: 3, name: 'tf3', type: TemplateFieldType.STRING)])
+
+        mockDomain(Template,      [ new Template(id: 1, fields: [TemplateField.get(1), TemplateField.get(2)]),
+                                    new Template(id: 2, fields: [TemplateField.get(3)])])
+
+        mockDomain(Subject,       [ new Subject(id: 1, name:'subject1', template: Template.get(1), species: Term.get(1)),
+                                    new Subject(id: 2, name:'subject2', template: Template.get(2), species: Term.get(1))])
+
+        mockDomain(SamplingEvent, [ new SamplingEvent(id:1, startTime: 2, duration: 5, sampleTemplate: new Template())])
+
+        mockDomain(Event,         [ new Event(id: 1, startTime: 6, endTime: 7)])//, new Event(id: 2, startTime: 8, endTime: 9)])
+
+        mockDomain(EventGroup,    [ new EventGroup(id:1, events: [Event.get(1)]) ])
+
+        mockDomain(Sample,        [ new Sample(id: 1, name:'sample1', parentSubject: Subject.get(1), parentEvent: SamplingEvent.get(1), parentEventGroup: EventGroup.get(1)),
+                                    new Sample(id: 2, name:'sample2', parentSubject: Subject.get(2), parentEvent: SamplingEvent.get(1))])
+
+        mockDomain(Assay,         [ new Assay(id: 1, samples:[Sample.get(1),Sample.get(2)]),
+                                    new Assay(id: 2, samples:[])])
+
+        Subject.get(1).setFieldValue('tf1', 'tfv1')
+        Subject.get(1).setFieldValue('tf2', 'tfv2')
+        Subject.get(2).setFieldValue('tf3', 'tfv3')
     }
 
@@ -26 +56 @@
     }
 
-    void testSomething() {
+    void testWrongAssayID() {
+        mockParams.id = 3
 
+        controller.exportAssayAsExcel()
+
+        assertEquals 'Redirected action should match', [action: 'selectAssay'], redirectArgs
+        assertEquals 'Error message', 'No assay found with id: 3.', mockFlash.errorMessage
+    }
+
+    void testExceptionHandling() {
+        mockParams.id = 1
+
+        controller.assayService = [exportAssayDataAsExcelFile:{throw new Exception('msg')}]
+        controller.exportAssayAsExcel()
+
+        assertEquals 'Redirected action should match', [action: 'selectAssay'], redirectArgs
+        assertEquals 'Error message', 'msg', mockFlash.errorMessage
+    }
+
+    void testEmptySampleList() {
+        mockParams.id = 2
+
+        def passedAssayData = []
+
+        controller.assayService = [exportAssayDataAsExcelFile:{a -> passedAssayData = a}]
+        controller.exportAssayAsExcel()
+
+        assertEquals 'Assay data', [], passedAssayData*.value.flatten()
+    }
+
+    void testTemplateFieldsAreCollected() {
+
+        mockParams.id = 1
+
+        Map passedAssayData
+
+        controller.assayService = [exportAssayDataAsExcelFile:{a -> passedAssayData = a}]
+        controller.exportAssayAsExcel()
+
+        def sample1index = passedAssayData.'Sample Data'.'name'.findIndexOf{it == 'sample1'}
+        def sample2index = passedAssayData.'Sample Data'.'name'.findIndexOf{it == 'sample2'}
+
+        assertEquals 'Subject template field', ['tfv1',''], passedAssayData.'Subject Data'.tf1[sample1index, sample2index]
+        assertEquals 'Subject template field', ['tfv2',''], passedAssayData.'Subject Data'.tf2[sample1index, sample2index]
+        assertEquals 'Subject template field', ['','tfv3'], passedAssayData.'Subject Data'.tf3[sample1index, sample2index]
+        assertEquals 'Subject species template field', ['Human', 'Human'], passedAssayData.'Subject Data'.species*.toString()
+        assertEquals 'Subject name template field', ['subject1','subject2'], passedAssayData.'Subject Data'.name[sample1index, sample2index]
+
+        assertEquals 'Sampling event template fields', [2], passedAssayData.'Sampling Event Data'.startTime
+        assertEquals 'Sampling event template fields', [5], passedAssayData.'Sampling Event Data'.duration
+        assertEquals 'Sampling event template fields', '[null]', passedAssayData.'Sampling Event Data'.sampleTemplate.toString()
+        assertEquals 'Event template fields', [6], passedAssayData.'Event Data'.startTime
+        assertEquals 'Event template fields', [7], passedAssayData.'Event Data'.endTime
+        assertEquals 'Sample template fields', ['sample1', 'sample2'], passedAssayData.'Sample Data'.name[sample1index, sample2index]
     }
 }

trunk/test/unit/dbnp/studycapturing/StudyControllerTests.groovy

@@ -4 +4 @@
 class StudyControllerTests extends ControllerUnitTestCase {
     protected void setUp() {
+
         super.setUp()
+        mockDomain(Study, [ new Study(id: 1, assays: [[id:1, name:'assay1'], [id:2, name:'assay2']]),
+                            new Study(id: 2, assays: [])])
+
     }
 
@@ -11 +15 @@
     }
 
-    void testSomething() {
+    void testAjaxGetAssays() {
 
+        mockParams.id = 1
+        controller.ajaxGetAssays()
+        assertEquals '[{"name":"assay1","id":1},{"name":"assay2","id":2}]', mockResponse.contentAsString
+    }
+
+
+    void testAjaxGetAssaysEmptyList() {
+
+        mockParams.id = 2
+        controller.ajaxGetAssays()
+        assertEquals '[]', mockResponse.contentAsString
     }
 }