Changeset 1156 for trunk

Timestamp:

Nov 17, 2010, 2:31:15 PM (10 years ago)

Author:

robert@…

Message:

Updated ontology chooser to also return an NCBO id when no NCBO id is given by the Bioportal JSON.

File:

• trunk/web-app/js/ontology-chooser.js (modified) (5 diffs)

trunk/web-app/js/ontology-chooser.js

@@ -121 +121 @@
                     $.getJSON(url, function(data) {
                         // parse result data
-                        var result = that.parseData(data.data);
+                        var result = that.parseData(data.data, ontology_id);
 
                         // cache results
@@ -135 +135 @@
 
                         // response callback
-                        response(that.parseData(data.data));
+                        response(result);
                     });
                 }
@@ -213 +213 @@
      * @return array
      */
-    parseData: function(data) {
+    parseData: function(data, ontology_ids) {
         var parsed = [];
         var rows = data.split('~!~');
@@ -221 +221 @@
             if (row) {
                 var cols = row.split('|');
+
+                                // If we search in a single ontology, the json doesn't return the
+                                // NCBO id in the 8th column (probably because we already know the NCBO id)
+                                var ncbo_id;
+                                if( cols.length > 8 ) {
+                                        ncbo_id = cols[8];
+                                } else {
+                                        ncbo_id = ontology_ids;
+                                }
 
                 parsed[ parsed.length ] = {
@@ -229 +238 @@
                     ontology_id     : cols[3],  // e.g. 29684
                     full_id         : cols[4],  // e.g. http://bioontology.org/projects/ontologies/birnlex#birnlex_161
-                    ncbo_id         : cols[8]   // e.g. 1494
+                    ncbo_id         : ncbo_id   // e.g. 1494
                 }
             }