1 | <%@ page import="dbnp.studycapturing.*" %> |
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2 | <%@ page import="org.dbnp.gdt.*" %> |
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3 | <html> |
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4 | <head> |
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5 | <meta name="layout" content="main"/> |
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6 | <g:if test="${studyList.size() == 1}"> |
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7 | <meta property="og:title" content="${studyList[0].title}"/> |
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8 | <meta property="og:description" content="${(studyList[0].getFieldValue('description')) ? studyList[0].getFieldValue('description') : 'A study in the Generic Study Capture Framework'}"/> |
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9 | </g:if> |
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10 | <g:set var="entityName" value="${message(code: 'study.label', default: 'Study')}"/> |
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11 | <title><g:message code="default.show.label" args="[entityName]"/></title> |
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12 | <link rel="stylesheet" href="${resource(dir: 'css', file: 'tipTip.css')}"/> |
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13 | <script type="text/javascript" src="${resource(dir: 'js', file: 'jquery.tipTip.minified.js')}"></script> |
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14 | <script type="text/javascript"> |
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15 | $(document).ready(function() { |
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16 | $("a.linktips").tipTip(); |
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17 | }); |
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18 | |
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19 | // Flag whether the timelines have been loaded |
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20 | var timelineloaded = false; |
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21 | |
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22 | // Number of timelines that should be loaded |
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23 | var numTimelines = ${studyList?.size()}; |
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24 | |
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25 | // This method is called on the event body.onLoad |
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26 | $(function() { |
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27 | $("#tabs").tabs({ |
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28 | show: function(event, ui) { |
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29 | // If the events tab is shown, the timeline should be redrawn |
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30 | if( ui.tab.hash == '#events-timeline' && !timelineloaded ) { |
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31 | loadTimeline( 'eventstimeline', 'eventtitles', 0 ); |
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32 | timelineloaded = true; |
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33 | } |
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34 | }, |
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35 | ajaxOptions: { |
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36 | error: function(xhr, status, index, anchor) { |
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37 | $(anchor.hash).html( |
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38 | "Couldn't load this tab. We'll try to fix this as soon as possible."); |
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39 | } |
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40 | } |
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41 | }); |
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42 | }); |
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43 | |
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44 | // Parameters for the SIMILE timeline |
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45 | Timeline_ajax_url = "${resource(dir: 'js', file: 'timeline-simile/timeline_ajax/simile-ajax-api.js')}"; |
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46 | Timeline_urlPrefix = '${resource(dir: 'js', file: 'timeline-simile/')}'; |
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47 | Timeline_parameters = 'bundle=true'; |
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48 | |
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49 | </script> |
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50 | <link rel="stylesheet" type="text/css" href="${resource(dir: 'css', file: 'studies.css')}"/> |
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51 | |
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52 | <!-- Include scripts for the SIMILE timeline. See http://simile-widgets.org/wiki/ --> |
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53 | <script src="${resource(dir: 'js', file: 'timeline-simile/timeline-api.js')}" type="text/javascript"></script> |
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54 | <script src="${resource(dir: 'js', file: 'timeline-simile/custom-timeline.js')}" type="text/javascript"></script> |
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55 | <script src="${resource(dir: 'js', file: 'timeline-simile/relative-time.js')}" type="text/javascript"></script> |
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56 | <script src="${resource(dir: 'js', file: 'jquery-callback-1.2.js')}" type="text/javascript"></script> |
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57 | |
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58 | <!-- Create the JSON objects for the timeline with events --> |
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59 | <script type="text/javascript" src="<g:createLink action="createTimelineBandsJs" id="${studyList.id.join(',')}"/>" type="text/javascript"></script> |
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60 | </head> |
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61 | <body> |
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62 | |
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63 | <div class="body" id="studies"> |
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64 | <h1><g:message code="default.show.label" args="[entityName]"/></h1> |
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65 | <g:if test="${flash.message}"> |
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66 | <div class="message">${flash.message}</div> |
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67 | </g:if> |
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68 | <div class="dialog"> |
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69 | <div id="tabs"> |
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70 | <ul> |
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71 | <li tab="study"><a href="#study">Study Information</a></li> |
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72 | <li tab="subjects"><a href="<g:createLink action="show_subjects" id="${studyList.id.join(',')}"/>" title="Subjects"><span>Subjects</span></a></li> |
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73 | <li tab="events"><a href="#events-timeline"><span>Events timeline</span></a></li> |
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74 | <li tab="events"><a href="<g:createLink action="show_events_table" id="${studyList.id.join(',')}"/>" title="Events table"><span>Events table</span></a></li> |
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75 | <li tab="assays"><a href="<g:createLink action="show_assays" id="${studyList.id.join(',')}"/>" title="Assays"><span>Assays</span></a></li> |
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76 | <li tab="samples"><a href="<g:createLink action="show_samples" id="${studyList.id.join(',')}"/>" title="Samples"><span>Samples</span></a></li> |
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77 | <li tab="study"><a href="<g:createLink action="show_persons" id="${studyList.id.join(',')}"/>" title="Persons"><span>Persons</span></a></li> |
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78 | <li tab="study"><a href="<g:createLink action="show_publications" id="${studyList.id.join(',')}"/>" title="Publications"><span>Publications</span></a></li> |
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79 | </ul> |
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80 | |
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81 | <div id="study"> |
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82 | <table> |
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83 | <!-- only show the head section if there are multiple studies --> |
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84 | <g:if test="${multipleStudies}"> |
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85 | <thead> |
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86 | <tr> |
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87 | <th></th> |
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88 | <g:each in="${studyList}" var="studyInstance"> |
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89 | <th>${studyInstance.title}</th> |
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90 | </g:each> |
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91 | </tr> |
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92 | </thead> |
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93 | </g:if> |
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94 | <% |
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95 | // Determine a union of the fields from all studies, in order |
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96 | // to show a proper list. We want every field to appear just once, |
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97 | // so the list is filtered for unique values |
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98 | studyFields = studyList[0].giveDomainFields() + studyList*.giveTemplateFields()?.flatten().unique() |
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99 | %> |
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100 | <!-- Show all template and domain fields, if filled --> |
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101 | <g:each in="${studyFields}" var="field"> |
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102 | <g:if test="${field && field?.isFilledInList( studyList )}"> |
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103 | <tr> |
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104 | <td>${field}</td> |
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105 | <g:each in="${studyList}" var="studyInstance"> |
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106 | <td> |
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107 | <g:if test="${studyInstance.fieldExists(field.name)}"> |
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108 | <af:showTemplateField field="${field}" entity="${studyInstance}"/> |
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109 | </g:if> |
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110 | <g:else> |
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111 | - |
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112 | </g:else> |
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113 | </td> |
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114 | </g:each> |
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115 | </tr> |
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116 | </g:if> |
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117 | </g:each> |
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118 | |
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119 | <!-- Add some extra fields --> |
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120 | <tr> |
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121 | <td>Events</td> |
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122 | <g:each in="${studyList}" var="studyInstance"> |
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123 | <td> |
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124 | <g:if test="${studyInstance.giveEventTemplates()?.size()==0}"> |
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125 | - |
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126 | </g:if> |
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127 | <g:else> |
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128 | ${studyInstance.giveEventTemplates().name.join(", ")} |
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129 | </g:else> |
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130 | </td> |
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131 | </g:each> |
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132 | </tr> |
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133 | <tr> |
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134 | <td>Sampling events</td> |
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135 | <g:each in="${studyList}" var="studyInstance"> |
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136 | <td> |
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137 | <g:if test="${studyInstance.giveSamplingEventTemplates()?.size()==0}"> |
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138 | - |
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139 | </g:if> |
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140 | <g:else> |
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141 | ${studyInstance.giveSamplingEventTemplates().name.join(", ")} |
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142 | </g:else> |
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143 | </td> |
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144 | </g:each> |
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145 | </tr> |
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146 | <tr> |
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147 | <td>Public</td> |
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148 | <g:each in="${studyList}" var="studyInstance"> |
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149 | <td> |
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150 | ${studyInstance.publicstudy} |
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151 | </td> |
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152 | </g:each> |
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153 | </tr> |
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154 | <tr> |
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155 | <td>Owner</td> |
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156 | <g:each in="${studyList}" var="studyInstance"> |
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157 | <td> |
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158 | ${studyInstance.owner?.username} |
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159 | </td> |
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160 | </g:each> |
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161 | </tr> |
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162 | <tr> |
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163 | <td>Readers</td> |
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164 | <g:each in="${studyList}" var="studyInstance"> |
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165 | <td> |
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166 | <g:if test="${studyInstance.readers.size() == 0}"> |
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167 | - |
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168 | </g:if> |
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169 | <g:else> |
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170 | ${studyInstance.readers.username.join(", ")} |
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171 | </g:else> |
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172 | </td> |
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173 | </g:each> |
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174 | </tr> |
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175 | <tr> |
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176 | <td>Writers</td> |
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177 | <g:each in="${studyList}" var="studyInstance"> |
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178 | <td> |
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179 | <g:if test="${studyInstance.writers?.size()==0}"> |
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180 | - |
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181 | </g:if> |
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182 | <g:else> |
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183 | ${studyInstance.writers.username.join(", ")} |
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184 | </g:else> |
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185 | </td> |
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186 | </g:each> |
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187 | </tr> |
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188 | </table> |
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189 | </div> |
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190 | |
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191 | <div id="events-timeline"> |
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192 | <g:if test="${studyList*.events?.flatten()?.size()==0 && studyInstance*.samplingEvents?.flatten()?.size()==0 }"> |
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193 | No events in these studies |
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194 | </g:if> |
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195 | <g:else> |
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196 | <g:each in="${studyList}" var="study" status="i"> |
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197 | <div style="margin: 10px; "> |
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198 | <div class="eventtitles" id="eventtitles-${i}"></div> |
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199 | <div class="eventstimeline" id="eventstimeline-${i}"></div> |
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200 | </div> |
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201 | </g:each> |
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202 | <noscript> |
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203 | Javascript is needed for showing the timeline, but it has been disabled in your browser. Please enable javascript or use |
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204 | the events table instead. |
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205 | </noscript> |
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206 | </g:else> |
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207 | </div> |
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208 | |
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209 | <% /* |
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210 | All other tabs are moved to separate views and are loaded using |
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211 | ajax calls when a tab is opened. See http://jqueryui.com/demos/tabs/#ajax |
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212 | */ %> |
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213 | |
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214 | </div> |
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215 | </div> |
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216 | <br> |
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217 | <div class="buttons"> |
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218 | <g:form action="delete"> |
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219 | <g:if test="${studyList?.size() == 1}"> |
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220 | <g:set var="studyInstance" value="${studyList[0]}"/> |
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221 | <g:hiddenField name="id" value="${studyInstance?.id}"/> |
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222 | <g:if test="${studyInstance.canWrite(loggedInUser)}"> |
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223 | <span class="button"> |
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224 | <g:link class="edit linktips" title="Edit this stuy" onclick="getTab(); return false;"> |
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225 | ${message(code: 'default.button.edit.label', default: 'Edit')} |
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226 | </g:link> |
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227 | </span> |
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228 | <span class="button"><g:link class="edit linktips" title="Edit the basic properties of this study" controller="simpleWizard" action="index" id="${studyInstance?.id}">Simple edit</g:link></span> |
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229 | </g:if> |
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230 | <g:if test="${studyInstance.isOwner(loggedInUser)}"> |
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231 | <span class="button"><g:actionSubmit class="delete" action="delete" value="${message(code: 'default.button.delete.label', default: 'Delete')}" onclick="return confirm('${message(code: 'default.button.delete.confirm.message', default: 'Are you sure?')}');"/></span> |
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232 | </g:if> |
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233 | </g:if> |
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234 | |
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235 | <script type="text/javascript"> |
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236 | function getTab() { |
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237 | var tab = $('li.ui-state-active', $('ul.ui-tabs-nav')).attr('tab'); |
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238 | var url = '<g:createLink controller="studyWizard" params="[jump:'edit']" id="${studyInstance?.id}" />&tab='+tab; |
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239 | document.location = url; |
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240 | } |
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241 | </script> |
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242 | |
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243 | <span class="button"><g:link class="backToList" action="list">Back to list</g:link></span> |
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244 | </g:form> |
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245 | </div> |
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246 | </div> |
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247 | </body> |
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248 | </html> |
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