| 1 | <html> |
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| 2 | |
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| 3 | <head> |
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| 4 | <title>Generic Study Capture Framework - Query studies</title> |
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| 5 | <meta name="layout" content="main" /> |
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| 6 | <g:setProvider library="jquery"/> |
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| 7 | <script src = ${createLinkTo(dir: 'js/jquery_combobox', file: 'ui.core.js')}></script> |
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| 8 | <script src = ${createLinkTo(dir: 'js/jquery_combobox', file: 'ui.combobox')}></script |
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| 9 | </head> |
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| 10 | |
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| 11 | <body> |
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| 12 | |
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| 13 | <h1>Advanced query - select samples</h1> |
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| 14 | <br> |
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| 15 | |
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| 16 | |
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| 17 | <g:form action="selectsample" url > |
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| 18 | |
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| 19 | |
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| 20 | <br> <%= params %> |
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| 21 | <br> <%= selectedStudyIds.each{ println it } %> |
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| 22 | <br> <%= subgroups%> |
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| 23 | <input type="hidden" name="selectedStudyIds" value="${selectedStudyIds}" </div> |
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| 24 | |
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| 25 | |
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| 26 | <% if (selectedStudies.size()>0) {%> |
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| 27 | <table > |
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| 28 | <tr> |
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| 29 | <td></td> |
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| 30 | <td><b> Study </b></td> |
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| 31 | <td><b> Subject </b></td> |
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| 32 | <td><b> Sampling Events </b></td> |
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| 33 | <td><b> Sample Name </b></td> |
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| 34 | <td><b> Sample Material </b></td> |
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| 35 | <td><b> Start Time </b></td> |
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| 36 | <g:if test="${subgroups.size>0}"> <td><b> Subgroups </b></td> </g:if> |
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| 37 | </tr> |
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| 38 | |
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| 39 | <g:each in="${selectedStudies}" status="j" var="studyIns"> |
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| 40 | <tr> |
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| 41 | <td> <input type="checkbox" name="${studyIns.title}" id="${studyIns.title}" class="checkbox1${studyIns.id}"> </td> |
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| 42 | <td> ${studyIns.title} </td> |
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| 43 | </tr> |
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| 44 | |
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| 45 | |
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| 46 | |
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| 47 | <g:if test="${studyIns.samplingEvents.size ()>0}" > |
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| 48 | <g:each in ="${studyIns.samplingEvents}" var="event"> |
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| 49 | <g:each in ="${event.samples}" var="sample"> |
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| 50 | <tr> |
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| 51 | <td></td><td></td> |
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| 52 | <td> <input type="checkbox" name="${studyIns.id}.${event.subject.name}" id="${event.subject.name}" class="checkbox2${studyIns.id}" > |
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| 53 | ${event.subject.name} </td> |
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| 54 | <td> ${studyIns.samplingEvents} </td> |
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| 55 | <td> ${sample.name}</td> |
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| 56 | <td> ${sample.material}</td> |
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| 57 | <td> ${event.getPrettyDuration( studyIns.startDate, event.startTime)} </td> |
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| 58 | |
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| 59 | <g:if test="${subgroups.size>0}"> |
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| 60 | <td> <select id="demo"> |
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| 61 | <g:each in ="${subgroups}" var="p"> |
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| 62 | <option value = "${p}"> "${p}" </option> |
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| 63 | </g:each> |
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| 64 | </select> </td> |
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| 65 | </g:if> |
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| 66 | </tr> |
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| 67 | </g:each> |
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| 68 | </g:each> |
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| 69 | </g:if> |
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| 70 | |
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| 71 | |
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| 72 | <g:else> |
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| 73 | <tr> |
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| 74 | <td></td> <td>Study does not cotain any samples. </td> |
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| 75 | <td></td> <td></td> <td></td> <td></td> <td></td> |
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| 76 | <g:if test="${subgroups.size>0}"> <td></td> </g:if> |
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| 77 | </tr> |
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| 78 | </g:else> |
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| 79 | </g:each> |
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| 80 | |
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| 81 | </table> |
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| 82 | |
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| 83 | |
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| 84 | |
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| 85 | <g:each in="${selectedStudies}" status="j" var="studyIns"> |
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| 86 | <% def cb1 = '\'.checkbox1' + studyIns.id + '\'' %> |
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| 87 | <% def cb2 = '\'.checkbox2' + studyIns.id + '\'' %> |
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| 88 | <script> |
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| 89 | $(${cb1}).click(function () { |
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| 90 | if($(this).attr("checked")==true) |
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| 91 | $(${cb2}).attr("checked", "checked"); |
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| 92 | }); |
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| 93 | $(${cb2}).click(function () { |
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| 94 | if($(this).attr("checked")==false) |
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| 95 | $(${cb1}).attr("checked", false); |
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| 96 | }); |
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| 97 | </script> |
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| 98 | </g:each> |
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| 99 | |
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| 100 | <%}%> |
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| 101 | |
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| 102 | |
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| 103 | Infer subgroups: |
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| 104 | <INPUT TYPE=submit name=submit Value="Subject Groups"> |
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| 105 | <INPUT TYPE=submit name=submit Value="Event Groups"> |
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| 106 | <INPUT TYPE=submit name=submit Value="Starting Time Groups"> |
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| 107 | |
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| 108 | <% if (selectedStudies.size()==0) { %> |
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| 109 | <br> Please select studies to query samples. |
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| 110 | <% } %> |
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| 111 | |
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| 112 | <br> |
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| 113 | <INPUT TYPE=submit name=submit Value="<< Back to study selection"> |
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| 114 | <INPUT TYPE=submit name=submit Value=">> Execute and continue with biomarker selection"> |
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| 115 | |
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| 116 | </g:form> |
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| 117 | |
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| 118 | |
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| 119 | |
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| 120 | </body> |
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| 121 | </html> |
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