1 | /** |
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2 | * Importer tag library |
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3 | * |
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4 | * The importer tag library gives support for automating several 'components' |
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5 | * |
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6 | * @package importer |
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7 | * @author t.w.abma@umcutrecht.nl |
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8 | * @since 20100202 |
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9 | * |
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10 | * Revision information: |
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11 | * $Rev: 299 $ |
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12 | * $Author: duh $ |
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13 | * $Date: 2010-03-22 13:40:35 +0000 (ma, 22 mrt 2010) $ |
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14 | */ |
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15 | |
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16 | package dbnp.importer |
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17 | import dbnp.studycapturing.Template |
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18 | import dbnp.studycapturing.TemplateFieldType |
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19 | import org.apache.poi.hssf.usermodel.HSSFCell |
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20 | import org.apache.poi.ss.usermodel.DataFormatter |
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21 | |
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22 | class ImporterTagLib { |
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23 | static namespace = 'importer' |
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24 | def standardentities = [[type:-1, name:"Don't import"], [type:0, name:"Study"], [type:1, name:"Subject"], [type:2, name:"Event"], |
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25 | [type:3, name:"Protocol"], [type:4, name:"Sample"]] |
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26 | |
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27 | /** |
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28 | * @param header string array containing header |
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29 | * @param datamatrix two dimensional array containing actual data |
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30 | * @return preview of the data with the ability to adjust the datatypes |
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31 | */ |
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32 | def preview = { attrs -> |
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33 | |
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34 | def header = attrs['header'] |
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35 | def datamatrix = attrs['datamatrix'] |
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36 | |
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37 | out << render (template:"common/preview", model:[header:header, datamatrix:datamatrix]) |
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38 | } |
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39 | |
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40 | /** |
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41 | * @param datamatrix two dimensional array containing entities with read values |
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42 | * @return postview of the imported data |
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43 | */ |
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44 | def postview = { attrs -> |
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45 | def datamatrix = attrs['datamatrix'] |
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46 | |
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47 | out << render (template:"common/postview", model:[datamatrix:datamatrix]) |
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48 | } |
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49 | |
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50 | def entity = { attrs -> |
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51 | out << entities[attrs['index']].name |
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52 | } |
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53 | |
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54 | /** |
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55 | * @param entities array in the format of columnindex:entitytype format |
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56 | */ |
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57 | def properties = { attrs -> |
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58 | def selectedentities = [] |
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59 | def header = attrs['header'] |
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60 | |
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61 | attrs['entities'].each { se -> |
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62 | def temp = se.split(":") |
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63 | def entity = [type:temp[1],columnindex:temp[0]] |
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64 | selectedentities.add(entity) |
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65 | } |
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66 | |
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67 | out << render (template:"common/properties", model:[selectedentities:selectedentities, standardentities:standardentities, header:header]) |
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68 | } |
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69 | |
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70 | /** |
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71 | * Possibly this will later on return an AJAX-like autocompletion chooser for the fields? |
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72 | * |
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73 | * @param importtemplate_id template identifier where fields are retrieved from |
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74 | * @param columnindex column in the header we're talking about |
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75 | * @return chooser object |
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76 | * */ |
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77 | def propertyChooser = { attrs -> |
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78 | // TODO: this should be changed to retrieving fields per entity |
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79 | def t = Template.get(session.importtemplate_id) |
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80 | def columnindex = attrs['columnindex'] |
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81 | |
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82 | switch (attrs['entitytype']) { |
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83 | case 0 : createPropertySelect(attrs['name'], t.fields, columnindex) |
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84 | break |
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85 | case 1 : break |
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86 | case 2 : break |
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87 | case 3 : break |
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88 | default : out << createPropertySelect(attrs['name'], t.fields, columnindex) |
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89 | break |
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90 | } |
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91 | } |
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92 | |
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93 | /** |
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94 | * @param name name of the HTML select object |
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95 | * @param options list of options to be used |
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96 | * @param columnIndex column identifier (corresponding to position in header of the Excel sheet) |
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97 | * @return HTML select object |
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98 | */ |
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99 | def createPropertySelect(String name, options, String columnIndex) |
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100 | { |
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101 | def res = "<select style=\"font-size:10px\" name=\"${name}\">" |
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102 | |
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103 | options.each { f -> |
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104 | res += "<option value=\"${columnIndex}:${f.id}\"" |
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105 | //res += (e.type.toInteger() == selected) ? " selected" : "" |
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106 | res += ">${f}</option>" |
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107 | } |
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108 | |
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109 | res += "</select>" |
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110 | return res |
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111 | } |
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112 | |
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113 | /** |
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114 | * @param selected selected TemplateFieldType |
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115 | * @param custval custom value to be combined in the option(s) of the selector |
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116 | * @param name name of the HTML select object |
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117 | * @return HTML select object |
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118 | * |
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119 | * @see dbnp.studycapturing.TemplateFieldType |
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120 | */ |
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121 | |
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122 | def entitySelect = { attrs -> |
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123 | def sel = (attrs['selected']==null) ? -1 : attrs['selected'] |
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124 | def custval = (attrs['customvalue']==null) ? "" : attrs['customvalue'] |
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125 | def name = (attrs['name']==null) ? -1 : attrs['name'] |
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126 | |
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127 | def res = "<select style=\"font-size:10px\" name=\"${name}\">" |
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128 | |
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129 | standardentities.each { e -> |
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130 | res += "<option value=\"${custval}:${e.type}\"" |
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131 | res += (e.type == sel) ? " selected" : "" |
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132 | res += ">${e.name}</option>" |
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133 | } |
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134 | |
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135 | res += "</select>" |
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136 | out << res |
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137 | } |
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138 | |
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139 | /** |
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140 | * @param selected selected TemplateFieldType |
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141 | * @param customvalue custom value to be combined in the option(s) of the selector |
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142 | * @param name name of the HTML select object |
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143 | * @return HTML select object |
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144 | * |
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145 | * @see dbnp.studycapturing.TemplateFieldType |
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146 | */ |
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147 | def templatefieldtypeSelect = { attrs -> |
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148 | def selected = (attrs['selected']==null) ? -1 : attrs['selected'] |
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149 | def customvalue = (attrs['customvalue']==null) ? "" : attrs['customvalue'] |
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150 | def name = (attrs['name']==null) ? "" : attrs['name'] |
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151 | |
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152 | def res = "<select style=\"font-size:10px\" name=\"${name}\">" |
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153 | |
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154 | TemplateFieldType.list().each { e -> |
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155 | res += "<option value=\"${customvalue}:${e}\"" |
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156 | res += (e == selected) ? " selected" : "" |
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157 | res += ">${e}</option>" |
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158 | } |
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159 | |
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160 | res += "</select>" |
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161 | |
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162 | out << res |
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163 | } |
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164 | |
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165 | /** |
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166 | * @param cell HSSFCell variable |
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167 | * @return good representation of variable (instead of toString()) |
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168 | */ |
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169 | def displayCell = { attrs -> |
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170 | def cell = attrs['cell'] |
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171 | def df = new DataFormatter() |
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172 | |
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173 | switch (cell.getCellType()) { |
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174 | case HSSFCell.CELL_TYPE_STRING : out << cell.getStringCellValue() |
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175 | break |
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176 | case HSSFCell.CELL_TYPE_NUMERIC : out << df.formatCellValue(cell) |
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177 | break |
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178 | } |
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179 | } |
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180 | } |
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