| 1 | /** |
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| 2 | * PilotController Controler |
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| 3 | * |
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| 4 | * Description of my controller |
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| 5 | * |
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| 6 | * @author m.s.vanvliet@lacdr.leidenuniv.nl (Michael van Vliet) |
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| 7 | * @since 20101019 |
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| 8 | * @package nmc |
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| 9 | * |
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| 10 | * Revision information: |
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| 11 | * $Rev: 1046 $ |
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| 12 | * $Author: m.s.vanvliet@lacdr.leidenuniv.nl $ |
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| 13 | * $Date: 2010-11-02 09:25:06 +0000 (di, 02 nov 2010) $ |
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| 14 | */ |
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| 15 | package nmc |
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| 16 | |
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| 17 | import dbnp.studycapturing.*; |
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| 18 | |
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| 19 | class PilotController { |
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| 20 | |
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| 21 | static allowedMethods = [save: "POST", update: "POST", delete: "POST"] |
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| 22 | |
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| 23 | /** |
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| 24 | * Fires after every action and determines the layout of the page |
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| 25 | */ |
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| 26 | def afterInterceptor = { model, modelAndView -> |
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| 27 | |
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| 28 | if ( params['dialog'] ) { |
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| 29 | model.layout = 'dialog'; |
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| 30 | model.extraparams = [ 'dialog': 'true' ] ; |
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| 31 | } else { |
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| 32 | model.layout = 'main'; |
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| 33 | model.extraparams = [] ; |
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| 34 | } |
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| 35 | } |
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| 36 | |
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| 37 | def index = { |
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| 38 | |
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| 39 | def studyInstance = new Study() |
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| 40 | studyInstance.properties = params |
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| 41 | |
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| 42 | [studyInstanceList: Study.list(params), studyInstance: studyInstance] |
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| 43 | } |
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| 44 | |
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| 45 | def list = { |
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| 46 | params.max = Math.min(params.max ? params.int('max') : 10, 100) |
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| 47 | [studyInstanceList: Study.list(params), studyInstanceTotal: Study.count()] |
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| 48 | } |
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| 49 | |
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| 50 | def save = { |
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| 51 | def studyInstance = new Study(params) |
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| 52 | |
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| 53 | //For Pilot we do not ask for code, we generate it for the user |
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| 54 | studyInstance.code = params?.title?.encodeAsMD5() |
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| 55 | |
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| 56 | def extraparams = new LinkedHashMap(); |
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| 57 | |
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| 58 | if( params[ 'dialog' ] ) { |
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| 59 | extraparams[ 'dialog' ] = params[ 'dialog' ] |
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| 60 | } |
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| 61 | |
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| 62 | if (studyInstance.save(flush: true)) { |
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| 63 | |
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| 64 | //Study was created, now setup a NMC - Metabolomics Assay for testing |
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| 65 | def assayInstance = new Assay() |
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| 66 | assayInstance.name = "${studyInstance.title} - Metabolomics Assay" |
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| 67 | assayInstance.module = AssayModule.findByName("Metabolomics module") |
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| 68 | assayInstance.externalAssayID = assayInstance?.name?.encodeAsMD5() |
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| 69 | studyInstance.addToAssays(assayInstance) |
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| 70 | assayInstance.save(flush: true) |
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| 71 | |
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| 72 | //flash.message = "${message(code: 'default.created.message', args: [message(code: 'study.label', default: 'Study'), ( studyInstance.title ? studyInstance.title : "" ) + " " + ( studyInstance.code ? studyInstance.code : "" )])}" |
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| 73 | |
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| 74 | redirect(action: "show", id: studyInstance.id, params: extraparams ) |
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| 75 | } |
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| 76 | else { |
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| 77 | render(view: "index", model: [studyInstance: studyInstance]) |
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| 78 | } |
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| 79 | } |
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| 80 | |
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| 81 | def show = { |
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| 82 | def studyInstance = Study.get(params.id) |
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| 83 | if (!studyInstance) { |
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| 84 | flash.message = "${message(code: 'default.not.found.message', args: [message(code: 'study.label', default: 'Study'), params.id])}" |
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| 85 | redirect(action: "list") |
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| 86 | } |
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| 87 | else { |
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| 88 | [studyInstance: studyInstance] |
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| 89 | } |
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| 90 | } |
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| 91 | |
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| 92 | def edit = { |
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| 93 | def studyInstance = Study.get(params.id) |
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| 94 | if (!studyInstance) { |
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| 95 | flash.message = "${message(code: 'default.not.found.message', args: [message(code: 'study.label', default: 'Study'), params.id])}" |
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| 96 | redirect(action: "list") |
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| 97 | } |
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| 98 | else { |
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| 99 | return [studyInstance: studyInstance] |
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| 100 | } |
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| 101 | } |
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| 102 | |
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| 103 | def update = { |
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| 104 | def studyInstance = Study.get(params.id) |
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| 105 | |
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| 106 | //For Pilot we do not ask for code, we generate it for the user |
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| 107 | studyInstance.code = studyInstance?.title?.encodeAsMD5() |
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| 108 | |
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| 109 | def extraparams = new LinkedHashMap(); |
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| 110 | |
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| 111 | if( params[ 'dialog' ] ) { |
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| 112 | extraparams[ 'dialog' ] = params[ 'dialog' ] |
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| 113 | } |
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| 114 | |
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| 115 | if (studyInstance) { |
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| 116 | if (params.version) { |
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| 117 | def version = params.version.toLong() |
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| 118 | if (studyInstance.version > version) { |
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| 119 | |
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| 120 | studyInstance.errors.rejectValue("version", "default.optimistic.locking.failure", [message(code: 'study.label', default: 'Study')] as Object[], "Another user has updated this Study while you were editing") |
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| 121 | render(view: "edit", model: [studyInstance: studyInstance]) |
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| 122 | return |
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| 123 | } |
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| 124 | } |
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| 125 | studyInstance.properties = params |
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| 126 | if (!studyInstance.hasErrors() && studyInstance.save(flush: true)) { |
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| 127 | flash.message = "${message(code: 'default.created.message', args: [message(code: 'study.label', default: 'Study'), ( studyInstance.title ? studyInstance.title : "" ) + " " + ( studyInstance.code ? studyInstance.code : "" )])}" |
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| 128 | redirect(action: "show", id: studyInstance.id, params: extraparams) |
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| 129 | } |
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| 130 | else { |
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| 131 | render(view: "edit", model: [studyInstance: studyInstance]) |
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| 132 | } |
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| 133 | } |
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| 134 | else { |
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| 135 | flash.message = "${message(code: 'default.not.found.message', args: [message(code: 'study.label', default: 'Study'), params.id])}" |
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| 136 | redirect(action: "list", params: extraparams) |
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| 137 | } |
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| 138 | } |
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| 139 | |
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| 140 | def delete = { |
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| 141 | def studyInstance = Study.get(params.id) |
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| 142 | |
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| 143 | def extraparams = new LinkedHashMap(); |
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| 144 | |
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| 145 | if( params[ 'dialog' ] ) { |
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| 146 | extraparams[ 'dialog' ] = params[ 'dialog' ] |
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| 147 | } |
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| 148 | |
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| 149 | if (studyInstance) { |
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| 150 | def studyName = ( studyInstance.title ? studyInstance.title : "" ) + " " + ( studyInstance.code ? studyInstance.code : "" ); |
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| 151 | try { |
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| 152 | studyInstance.delete(flush: true) |
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| 153 | flash.message = "${message(code: 'default.deleted.message', args: [message(code: 'study.label', default: 'Study'), studyName])}" |
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| 154 | redirect(action: "list", params: extraparams) |
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| 155 | } |
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| 156 | catch (org.springframework.dao.DataIntegrityViolationException e) { |
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| 157 | flash.message = "${message(code: 'default.not.deleted.message', args: [message(code: 'study.label', default: 'Study'), studyName])}" |
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| 158 | redirect(action: "show", id: params.id, params: extraparams) |
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| 159 | } |
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| 160 | } |
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| 161 | else { |
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| 162 | flash.message = "${message(code: 'default.not.deleted.message', args: [message(code: 'study.label', default: 'Study'), studyName])}" |
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| 163 | redirect(action: "list", params: extraparams) |
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| 164 | } |
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| 165 | } |
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| 166 | } |
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