1 | import dbnp.studycapturing.* |
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2 | import dbnp.clinicaldata.ClinicalFloatData |
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3 | import dbnp.clinicaldata.ClinicalMeasurement |
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4 | |
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5 | // The sandbox is meant for internal communication over code examples etc. |
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6 | |
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7 | class SandboxController { |
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8 | |
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9 | def clinicalDataLayerService |
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10 | def oauthService |
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11 | |
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12 | def index = { |
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13 | |
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14 | // Get the example study in a lazy way |
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15 | def st = Study.get(1) |
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16 | println st.title |
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17 | println st.subjects |
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18 | def fieldsAll = st.giveSubjectTemplates().asList().first().fields |
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19 | def f = fieldsAll[0] |
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20 | println fieldsAll.class |
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21 | println f.class |
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22 | f.each { |
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23 | println "" + it + "-" + it.class |
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24 | } |
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25 | //println st.giveAllFields() |
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26 | |
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27 | // This is a way to iterate over the fields in your controller |
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28 | // And print them to the console |
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29 | // Most of the time, you would just iterate over them in the view using <g:each> |
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30 | // See also views/sandbox/index.gsp |
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31 | f.each { field -> |
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32 | println field.name + "(" + field.type + ")" |
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33 | } |
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34 | |
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35 | //Let's get a certain field for a certain subject |
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36 | /*def subject = st.subjects.get(1) |
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37 | |
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38 | if (subject) { |
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39 | println st.template.getSubjectFieldType('Age') |
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40 | println subject.getFieldValue('Genotype') |
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41 | subject.setFieldValue('Genotype','wildtype') |
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42 | println subject.getFieldValue('Genotype') |
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43 | subject.setFieldValue('name','hallo') |
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44 | println subject.name }*/ |
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45 | |
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46 | |
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47 | // Demonstration of querying mechanism |
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48 | //println "Features available for first assay of PPSH study: " + clinicalDataLayerService.getFeaturesQuantitative(Study.findByCode("PPSH").assays*.id[0]) |
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49 | //println "LDL feature value for two subjects: " + clinicalDataLayerService.getDataQuantitative('LDL',1,['A1_B','A3_B'] as String[]) |
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50 | |
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51 | // Specify which variables we want to be available in the controller (implicit return statement) |
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52 | [fields: f, subjects: st.subjects, studyInstance: st, subject: Subject.findByName('A1')] |
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53 | } |
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54 | |
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55 | def oauth = { |
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56 | def secret = session.oauthToken.secret |
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57 | def response = oauthService.accessResource('http://www.myexperiment.org/whoami.xml', 'myExperiment', |
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58 | [key: session.oauthToken.key, secret: session.oauthToken.secret], 'GET') |
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59 | render ("Calling whoami from myExperiment [key:" + key + ", secret:"+secret+"]") |
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60 | render ("Response: " + response) |
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61 | |
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62 | } |
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63 | |
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64 | |
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65 | } |
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