Changeset 9 for trunk/grails-app/domain/nl/tno/metagenomics/AssaySample.groovy

Timestamp:

Jan 28, 2011, 12:30:39 PM (12 years ago)

Author:

robert@…

Message:

 

File:

• trunk/grails-app/domain/nl/tno/metagenomics/AssaySample.groovy (modified) (4 diffs)

trunk/grails-app/domain/nl/tno/metagenomics/AssaySample.groovy

@@ -16 +16 @@
         String oligoNumber              // Oligonumber used to identify the sample
         String tagSequence              // Tag originally used to identify the sample
+        String tagName                  // Tag name
 
         static belongsTo  = [ assay: Assay, sample: Sample, run: Run ]
@@ -23 +24 @@
                 numUniqueSequences(nullable: true)
                 oligoNumber(nullable: true)
+                
+                /*
+                , validator: { value, obj, errors ->
+                        // When one oligoNumber is used in different assaysamples,
+                        // they must also have the same tagSequences and tagNames
+                        
+                        // Check whether this oligoNumber exists in the database
+                        def otherAssaySamples = AssaySample.findAllByOligoNumber( value )
+                        if( !otherAssaySamples || otherAssaySamples.size() == 0 ) {
+                                return true;
+                        }
+                        
+                        // Loop through the other assaysamples with this oligonumber
+                        otherAssaySamples.each { otherAS ->
+                                // Only check other objects, don't compare with itself (because that
+                                // way it wouldn't be possible anymore to edit an object)
+                                if( otherAS.id != obj.id ) {
+                                        if( otherAS.tagSequence != obj.tagSequence || otherAS.tagName != obj.tagName ) {
+                                                return false;
+                                        }
+                                }
+                        }
+                        
+                        return true
+                } 
+                 */
                 tagSequence(nullable: true)
+                tagName(nullable:true)
                 run(nullable: true);
         }
@@ -150 +178 @@
          */
         public boolean containsData() {
-                return tagSequence || oligoNumber || numFiles() > 0;
+                return tagSequence || tagName || oligoNumber || numFiles() > 0;
         }
         
@@ -164 +192 @@
                 otherAssaySample.tagSequence = tagSequence;
                 otherAssaySample.oligoNumber = oligoNumber;
+                otherAssaySample.tagName         = tagName;
                 otherAssaySample.run         = run;