source: trunk/grails-app/views/assaySample/show.gsp @ 6

<h2>${assaySample.sample.name}</h2>

<h2>Details</h2>

<ul>
        <li><label>Tag sequence</label><span class="value">${assaySample.tagSequence}</span></li>
        <li><label>Oligo number</label><span class="value">${assaySample.oligoNumber}</span></li>
        <li><label>Run(s)</label><span class="value">${assaySample.sequenceData?.run.name.unique().join( ',' )}</span></li>
        <li><label># sequences</label><span class="value">${assaySample.numSequences() ?: '-'}</span></li>
        <li><label>Average quality</label><span class="value">${assaySample.averageQuality() ?: '-'}</span></li>
        <li><label># unique sequences</label><span class="value">${assaySample.numUniqueSequences ?: '-'}</span></li>
</ul>

<g:if test="${assaySample.sequenceData?.size()}">
        <h2>Files</h2>
        <table class="paginate">
                <thead>
                        <tr>
                                <th nowrap>Sequence file</th>
                                <th nowrap>Quality file</th>
                                <th nowrap># sequences</th>
                                <th nowrap>avg quality</th>
                                <th class="nonsortable"></th>
                        </tr>
                </thead>                        
                <tbody>
                        <g:each in="${assaySample.sequenceData}" var="sequenceData">
                                <tr>
                                        <td><g:uploadedFile value="${sequenceData.sequenceFile}" /></td>
                                        <td>
                                                <g:if test="${sequenceData.qualityFile}">
                                                        <g:uploadedFile value="${sequenceData.qualityFile}" />
                                                </g:if>
                                        </td>
                                        <td>${sequenceData.numSequences}</td>
                                        <td>
                                                <g:if test="${sequenceData.averageQuality > 0.0}">
                                                        <g:formatNumber number="${sequenceData.averageQuality}" format="0.0" />
                                                </g:if>
                                                <g:else>
                                                        -
                                                </g:else>
                                        </td>
                                        <td class="button"><g:link onClick="return confirm( 'Are you sure you want to remove the selected files from this sample?' );" controller="fasta" action="deleteData" id="${sequenceData.id}"><img src="${fam.icon(name: 'delete')}" /></g:link></td>
                                </tr>
                        </g:each>
                </tbody>
        </table>
</g:if>