Last change
on this file since 7 was
7,
checked in by robert@…, 11 years ago
|
- Created tests for the synchronization and trash
- Improved synchronizationservice and trash
- Put authorization checks in several pages
|
File size:
1.8 KB
|
Rev | Line | |
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[4] | 1 | <h2>${assaySample.sample.name}</h2> |
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| 2 | |
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[7] | 3 | <ul> |
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| 4 | <li><label>Study</label><span class="value">${assaySample.assay?.study?.name}</span></li> |
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| 5 | <li><label>Assay</label><span class="value">${assaySample.assay?.name}</span></li> |
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| 6 | <li><label>Sample</label><span class="value">${assaySample.sample?.name}</span></li> |
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| 7 | <li><label>Run</label><span class="value">${assaySample.run?.name}</span></li> |
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| 8 | </ul> |
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| 9 | |
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[4] | 10 | <h2>Details</h2> |
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| 11 | |
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| 12 | <ul> |
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| 13 | <li><label>Tag sequence</label><span class="value">${assaySample.tagSequence}</span></li> |
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| 14 | <li><label>Oligo number</label><span class="value">${assaySample.oligoNumber}</span></li> |
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| 15 | <li><label># sequences</label><span class="value">${assaySample.numSequences() ?: '-'}</span></li> |
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| 16 | <li><label>Average quality</label><span class="value">${assaySample.averageQuality() ?: '-'}</span></li> |
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| 17 | <li><label># unique sequences</label><span class="value">${assaySample.numUniqueSequences ?: '-'}</span></li> |
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| 18 | </ul> |
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| 19 | |
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| 20 | <g:if test="${assaySample.sequenceData?.size()}"> |
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| 21 | <h2>Files</h2> |
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| 22 | <table class="paginate"> |
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| 23 | <thead> |
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| 24 | <tr> |
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| 25 | <th nowrap>Sequence file</th> |
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| 26 | <th nowrap>Quality file</th> |
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| 27 | <th nowrap># sequences</th> |
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| 28 | <th class="nonsortable"></th> |
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| 29 | </tr> |
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| 30 | </thead> |
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| 31 | <tbody> |
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| 32 | <g:each in="${assaySample.sequenceData}" var="sequenceData"> |
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| 33 | <tr> |
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| 34 | <td><g:uploadedFile value="${sequenceData.sequenceFile}" /></td> |
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| 35 | <td> |
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| 36 | <g:if test="${sequenceData.qualityFile}"> |
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| 37 | <g:uploadedFile value="${sequenceData.qualityFile}" /> |
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| 38 | </g:if> |
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| 39 | </td> |
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| 40 | <td>${sequenceData.numSequences}</td> |
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[7] | 41 | <td class="button"><g:link onClick="return confirm( 'Are you sure you want to remove the selected files from this sample?' );" controller="fasta" action="deleteData" id="${sequenceData.id}" params="[entityType: entityType]"><img src="${fam.icon(name: 'delete')}" /></g:link></td> |
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[4] | 42 | </tr> |
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| 43 | </g:each> |
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| 44 | </tbody> |
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| 45 | </table> |
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| 46 | </g:if> |
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