Timeline


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Feb 2, 2012:

5:02 PM Changeset [148] by tim.te.beek@…
Write month name in full for compatibility with Cytoscape plugin …
4:44 PM Changeset [147] by tim.te.beek@…
Skip single nodes without edges. Fixes reports of 0 0 0 graphs, as …
3:55 PM Changeset [146] by tim.te.beek@…
Apply GNU Lesser General Public License
3:42 PM Changeset [145] by tim.te.beek@…
Cytoscape plugin names may not contain whitespace
3:29 PM Changeset [144] by tim.te.beek@…
Explicitly add UTF-8 CharSet? when creating PrintWriter?
3:23 PM Changeset [143] by tim.te.beek@…
Add jxr plugin for source code cross reference Update versions of PMD …
3:07 PM Changeset [142] by tim.te.beek@…
Check for the availability of Desktop before every test Disable test …
3:02 PM Changeset [141] by tim.te.beek@…
Check isCancelled rather than catching and swallowing …
2:58 PM Changeset [140] by tim.te.beek@…
Incrementally number the subnetworks Allow for the creation of …
1:00 PM Changeset [139] by tim.te.beek@…
Rename test and do not setup look and feel
12:52 PM Changeset [138] by tim.te.beek@…
Convert columns from static field and map to proper Enum
12:39 PM Changeset [137] by tim.te.beek@…
Update signature of export method to take a List with Sets of CyEdges?
11:55 AM Changeset [136] by tim.te.beek@…
Remove superfluous call to new CytoscapeInit?().init Reorder tests to …
10:04 AM Changeset [135] by tim.te.beek@…
Run Cytoscape in Library mode, although I doubt that would fix …

Feb 1, 2012:

11:12 PM Changeset [134] by tim.te.beek@…
Extract class to contain externally callable methods
10:41 PM Changeset [133] by tim.te.beek@…
Remove cast now that return type of overridden method is fixed
10:26 PM Changeset [132] by tim.te.beek@…
Setup Cytoscape beforehand Extract common method to check for …
10:03 PM Changeset [131] by tim.te.beek@…
Call graphFinder.run in getGraphsInNetwork to actually start finding …
6:17 PM Changeset [130] by tim.te.beek@…
fireTableDataChanged if firstNewRow == 0 rather than lastNewRow
6:14 PM Changeset [129] by tim.te.beek@…
Add JavaDoc? comments Add getGraphsInNetwork method to find all graphs …

Jan 23, 2012:

11:19 PM Changeset [128] by tim.te.beek@…
Add two todo items Rename class Fail test if desktop not available, …
10:27 PM Changeset [127] by tim.te.beek@…
Update test to (hopefully) work in headless mode
10:03 PM Changeset [126] by tim.te.beek@…
Add JUnit to classpath & pom
10:00 PM Changeset [125] by tim.te.beek@…
Always close PrintWriter? by using finally Add a Test class to …
9:00 PM Changeset [124] by tim.te.beek@…
Use table to convert between selection rowIndices and tableModel …
8:23 PM Changeset [123] by tim.te.beek@…
Extract static methods to create subnetworks and export table
7:42 PM Changeset [122] by tim.te.beek@…
Move to trunk now that we've split the code into two plugins
7:40 PM Changeset [121] by tim.te.beek@…
5:53 PM Changeset [120] by tim.te.beek@…
Update Runner to be rename safe
5:53 PM Changeset [119] by tim.te.beek@…
Create a Data class for the GraphSelectionDialog? to separate datamodel …
3:47 PM Changeset [118] by tim.te.beek@…
Use a custom button model to Enable/Disable? buttons from a single …
12:42 PM Changeset [117] by tim.te.beek@…
Remove subnetworks related code, now that that's branched off to a new …
12:38 PM Changeset [116] by tim.te.beek@…
Tweak component layout by linking sizes of buttons, rather than …
12:29 PM Changeset [115] by tim.te.beek@…
Layout Components using GroupLayout? in a separate method
11:40 AM Changeset [114] by tim.te.beek@…
Remove snapshot piqc plugin download site entry
11:02 AM Changeset [113] by tim.te.beek@…
Remove empty directory
11:02 AM Changeset [112] by tim.te.beek@…
Move plugin to branches folder directly, rather than nested in a …
10:59 AM Changeset [111] by tim.te.beek@…
Rename packages as part of rebranding
10:57 AM Changeset [110] by tim.te.beek@…
Move classes to base package
10:50 AM Changeset [109] by tim.te.beek@…
Initial set of changes to remove unrelated functionality and rebrand …
10:29 AM Changeset [108] by tim.te.beek@…
10:28 AM Changeset [107] by tim.te.beek@…
10:28 AM Changeset [106] by tim.te.beek@…

Jan 20, 2012:

11:53 AM Changeset [105] by tim.te.beek@…
svn propdel svn:mime-type --recursive
10:24 AM Changeset [104] by tim.te.beek@…
Add settings as argument to ButtonPanel?
9:48 AM Changeset [103] by tim.te.beek@…
Add JDialog as argument to ButtonPanel?, so dispose works when clicking …
9:42 AM Changeset [102] by tim.te.beek@…
Extract button panel for the import & cancel buttons Add save and load …
9:41 AM Changeset [101] by tim.te.beek@…
Only fire changes in comboboxmodel when header changed Store source, …
12:25 AM Changeset [100] by tim.te.beek@…
Add sourceAttr, edgeAttr & nodeAttr to ParserSettingsModel? Grow …

Jan 19, 2012:

10:38 PM Changeset [99] by tim.te.beek@…
Order imports Add gap in between buttons
10:34 PM Changeset [98] by tim.te.beek@…
Only add container gaps in Dialogs Use GroupLayout? in PreviewPanel?, …
9:51 PM Changeset [97] by tim.te.beek@…
Restrict sizes for the column comboboxes Use the recommended way to …
9:00 PM Changeset [96] by tim.te.beek@…
Only fire that the table model structure has changed if the columns …
5:51 PM Changeset [95] by tim.te.beek@…
Use GroupLayout? in TableImportDialog? Pass ParsingTableModel? to …
4:18 PM Changeset [94] by tim.te.beek@…
Add work in progress InterpretationDialog?
3:24 PM Changeset [93] by tim.te.beek@…
Also exit on windowClosed
2:46 PM Changeset [92] by tim.te.beek@…
Also add Frame parent constructor argument to GraphSelectionDialog? Add …
2:29 PM Changeset [91] by tim.te.beek@…
Add parent as argument to TableImportDialog? Add class to show just the …
12:21 PM Changeset [90] by tim.te.beek@…
Add JTextField for comment character Change type of comment character …

Jan 18, 2012:

10:10 PM Changeset [89] by tim.te.beek@…
Update test to include reparsing after changing settings
6:53 PM Changeset [88] by tim.te.beek@…
Rename FilePanel? to ParseOptionsPanel?
6:52 PM Changeset [87] by tim.te.beek@…
Move open file button to previewpanel
4:26 PM Changeset [86] by tim.te.beek@…
Fix subtle error related to toggling first line is header Rename …
3:05 PM Changeset [85] by tim.te.beek@…
Remove renamed TableParser?
3:04 PM Changeset [84] by tim.te.beek@…
Update test to reflect changes Add lombok as dependency
3:04 PM Changeset [83] by tim.te.beek@…
Create a ParserSettingsModel? that is shared between ParsingTableModel?
11:09 AM Changeset [82] by tim.te.beek@…
Do not initialize columnNames to new String[0] to fix getColumnCount.. …

Jan 17, 2012:

5:51 PM Changeset [81] by tim.te.beek@…
Add TODO items to provide starting points for further development Call …
5:46 PM Changeset [80] by tim.te.beek@…
Add some initial table parsing logic & controls
5:45 PM Changeset [79] by tim.te.beek@…
Update version number to 1.3 Add dependencies on opencsv & junit Add …

Jan 16, 2012:

3:12 PM Changeset [78] by tim.te.beek@…
Use model to update selectedLabel rather than calling setText
12:33 PM Changeset [77] by tim.te.beek@…
Have create* methods return the new component they create, rather than …

Jan 12, 2012:

3:35 PM Changeset [76] by tim.te.beek@…
Loop over GraphsTableModel?.columnNames.keySet() in …
3:32 PM Changeset [75] by tim.te.beek@…
Use SwingUtilities?.invokeLater to initialize plugin components on EDT …
2:53 PM Changeset [74] by tim.te.beek@…
Rename view package to subnetworks to better reflect contents
11:35 AM Changeset [73] by tim.te.beek@…
Set CytoscapeDesktop? as parent of GraphSelectionDialog? to make window …

Jan 11, 2012:

7:16 PM Changeset [72] by tim.te.beek@…
Add method to createExportButton, which has preliminary implementation …
6:10 PM Changeset [71] by tim.te.beek@…
Remove total nodes column Remove multiple dubious List<Set<? extends …
5:37 PM Changeset [70] by tim.te.beek@…
Update version to 1.2
5:37 PM Changeset [69] by tim.te.beek@…
Add columns for number of source and target nodes to subnetwork selection
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